Corvus brachyrhynchos (American crow): 103621673 Help Entry 103621673         CDS       T08418                                  Symbol THOC2 Name (RefSeq) THO complex subunit 2   KO K12879   THO complex subunit 2 Organism cbrc  Corvus brachyrhynchos (American crow) Pathway cbrc03013   Nucleocytoplasmic transport cbrc03040   Spliceosome Brite KEGG Orthology (KO) [BR:cbrc00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     103621673 (THOC2)   09122 Translation    03013 Nucleocytoplasmic transport     103621673 (THOC2)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:cbrc03019]     103621673 (THOC2)    03041 Spliceosome [BR:cbrc03041]     103621673 (THOC2) Messenger RNA biogenesis [BR:cbrc03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     TREX complex      103621673 (THOC2) Spliceosome [BR:cbrc03041]  Complex C   Other components    EJC/TREX     103621673 (THOC2)  Other splicing related proteins   Spliceosome associated proteins (SAPs)    TREX complex     103621673 (THOC2) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Tho2 THOC2_N Thoc2 Motif Other DBs NCBI-GeneID:  103621673 NCBI-ProteinID:  XP_017598611 LinkDB All DBs Position Unknown AA seq 1518 aa AA seqDB search MPSILADVFCILDIETSCLEEKNKRDHFTQLVLACLYLVSDTVLKERLDPETLESLGLIK QSQQFNQKSVKIKTKLFYKQQKFNLLREENEGYAKLIAELGQDLSGNITSDLILENIKSL IGCFNLDPNRVLDIILEVYECRPEYDDFFVPLIESYMYMCEPQTLCHILGFKFKFYQDPS GETPSSLYRVAAVLLQHNLIDLEDLYVHLLPGDNTIIEEHKREIVEAKQIVRKLTMVVLS SEKTEEKEKEKEKEEEKTEKPPDNQKLGLLEALLKIGDWHHSQSIMDQMPPFYATSHKPI AIALCQLVHVTVEPLYRRVGVPKGAKGSPISSLPNKRAPKQAESFEELRKEVFNMLCYLG PHLSHDPILFAKVVRLGKAFMKEFQSDGSKQEDKEKMETLFSCLLSITDQVLLPSLSLMD CNACMSEELWGMFKTFPYQYRYRLYGQWKNETYNSHPLLVKVKAQTIDRAKYIMKRLTKE NVKPSGRQIGKLSHSNPTILFDYILSQIQKYDNLITPVVDSLKYLTSLNYDVLAYCIIEA LANPEKERMKHDDTTISSWLQSLASFCGAVFRKYPIELAGLLQYVANQLKAGKSFDLLIL KEVVQKMAGIEITEEMTMEQLEAMTGGEQLKAEGGYFGQIRNTKKSSQRLKDALLDHDLA LPLCLLMAQQRNGVIFQEGGEKHLKLVGKLYDQCHDTLVQFGGFLASNLSTEDYIKRVPS IDVLCNEFHTPHDAAFFLSRPMYAHHISSKYDELKKAEKGNKQQHKVHKYITSCELVMAP VHEAVISLHLPKVWDDISPQFYATFWSLTMYDLAVPHSSYDREVNKLKVQMKAIDDNQEM PPNKKKKEKERCTALQDKLLEEEKKQLEHVQRVLQRLKLEKDNWLLAKSTKNETITKFLQ LCIFPRCIFSAIDAVYCAHFVELVHQQKTPNFSTLLCYDRVFSDIIYTVASCTENEASRY GRFLCCMLETVTRWHSDRVIYEKECGNYPGFLTILRATGFDGGNKADQLDYENFRHVVHK WHYKLTKASVHCLETGEYTHIRNILIVLTKILPWYPKVLNLGQALERRVHKICQEEKEKR PDLYALAMGYSGQLKSRKPFMIPENEFHHKDPPARNAVPATVQNGPGGAGMPTSLTINTV RLEEGTTEETDKLKEKSQGVVKVINKTVNATPKVTTSNGNSASNSKIIKEKDDKEKSGKE KDKEKKDKTPAATPEMKALGKDGKDKPKEERANKDEKAREIKEKTPKSDKDKEKVKKEEK ASKEEKSKTVVTIIESKSTAEKEREKEPSRERDLAKEMKSKENAKGGEKVPVAGSLKSPV PRSETSESEREQKRRKVDTHSSPSHSSTVKDNLNELKDSSAKHYVNHTTPTLSKSKEREV EKKDLDKSRERSREREKKDEKDRKDRKRDHSNSDREVPQDSTKRRKEENGTTGSSKHSKS ESPSDSPRLNEKEKDKNKSKSSGKEKGDSIKAEKMEKSSSGSKKESRHDKEKAEKKEKRD STGGKEEKKHHKSSDKHR NT seq 4557 nt NT seq  +upstreamnt  +downstreamnt atgccttctatccttgctgatgtattctgcatattagatattgaaacaagttgtttagaa gaaaaaaataagagggatcattttacacaactagtattggcctgtttgtatcttgtatct gacactgtcctaaaggagcgtttagatccagagacgctggagtcactgggacttatcaag cagtctcaacagttcaatcaaaaatctgttaaaataaagacaaaactattttataagcaa cagaagtttaatttgctaagagaggagaatgaaggttatgcaaagctcattgcggaactg ggtcaagacttatctggaaatatcactagtgatttaatccttgaaaatatcaaatcttta ataggatgtttcaatcttgatcctaacagagttttggatattatcctagaagtctatgag tgcaggcctgagtatgatgatttcttcgtaccactgatagagtcttacatgtacatgtgt gaacctcaaactctatgccatatccttgggttcaaattcaaattttatcaggatccaagt ggtgagaccccttcctccttatacagagttgctgctgtccttttgcaacataatctcata gatttggaagatctttatgttcatcttctaccaggggataataccatcattgaggagcac aagcgagagatagtggaagctaaacaaattgtcagaaaacttacaatggtcgtcttatca tctgaaaagactgaggaaaaggagaaagaaaaggaaaaagaggaggagaaaactgaaaag cctcctgataatcagaaacttggcttattggaagccttattaaaaattggtgattggcac cattcgcaaagtattatggatcagatgcctccgttctacgctacttcgcacaagccgatt gcgatcgcgctttgccagcttgtccacgtgacagttgagcctctgtaccgcagagttggt gtacctaaaggagctaaagggtcaccaatttcctctttgccaaacaagagagcaccaaaa caagcagagagctttgaggaattgagaaaggaagtgttcaacatgctttgttaccttggt cctcatctgtcccatgatcccattttatttgcaaaagtagtacgtcttggaaaagcattt atgaaagagtttcagtctgatggaagcaaacaggaagataaagagaaaatggagacactg ttcagctgtttgttgagtattactgatcaagtcttgcttccatctctttccttgatggac tgcaatgcatgcatgtctgaggaattatggggaatgttcaaaacctttccataccagtac cggtaccgtctctatgggcaatggaagaatgaaacatacaatagtcacccacttcttgtg aaagttaaagctcaaaccatagaccgagccaaatacatcatgaagcgtttaactaaggaa aatgtgaaaccctctggaagacaaattgggaagctcagccacagcaatcctacaatttta tttgattatattttatcgcaaatacaaaaatatgataacttgataactccggttgttgat tcactgaaatacctcacttccctgaactacgatgtcttggcatattgtatcattgaggca ttggcaaaccctgagaaggagagaatgaagcatgatgacactacaatctcaagctggctg cagagtctggcaagcttttgtggtgctgttttccgaaaatacccaattgaacttgcaggc ctcctgcagtatgtagccaaccagctgaaagctggcaagagctttgatttgcttatttta aaagaggtagtgcagaaaatggcggggatagaaattactgaagaaatgaccatggaacaa ttggaagccatgactggtggagaacaactgaaagctgagggtggatactttggccaaatc aggaatacaaaaaagtcatctcagagattgaaagatgcgttattggaccatgatcttgcc ctcccactgtgcctgcttatggctcaacagagaaatggtgtcatctttcaggaaggaggg gaaaaacatctgaagctggtgggaaagctgtatgatcagtgccatgacaccctggtacaa tttggtgggtttttagcatccaatctaagcacagaggattacattaagcgagtgccttct attgatgttctctgtaatgagtttcacacgcctcatgatgctgcattcttcctctcaaga cccatgtatgcacaccacatttcatcaaagtatgatgaactgaaaaaagctgagaaggga aataaacagcagcacaaagttcacaaatacattacatcatgtgagctggtgatggctcct gttcacgaagctgtgatttctctgcacctccctaaagtttgggatgacatcagccctcag ttttatgctacattctggtctttaacaatgtatgaccttgctgtgccacacagcagctat gacagagaagtcaataaacttaaagtccagatgaaagccatagatgacaatcaggaaatg cctccaaataaaaagaaaaaagaaaaagaacgttgcacagctctgcaggacaagctcctt gaagaggagaagaagcaattggagcatgtgcagagggttctacagagactgaaactagag aaagataactggcttctggcaaaatctaccaaaaatgagactatcaccaaatttttacag ttgtgtatatttcctcgatgcattttttcggcaattgatgcagtttactgtgctcacttt gttgaactggtgcatcaacaaaaaacacccaacttctctacacttctctgctatgaccga gtattctctgatattatatatacagttgcaagttgcacggaaaatgaagccagtagatat ggcaggtttttatgctgtatgctggagaccgtgaccagatggcacagtgacagagtcata tatgaaaaggaatgtggcaactatccaggcttcctaactatattacgagcaactgggttt gatggtggaaataaggctgatcaattggattatgagaattttagacacgtggtacacaaa tggcactataaattaactaaggcttctgtgcactgcctggaaacaggtgaatatacacat atcagaaacatcctgatcgtgctgaccaaaatccttccatggtatccaaaagtgctgaac ctgggtcaagccttggaaagaagagtacacaagatatgtcaggaagagaaagagaagaga cctgatctatatgcattggcaatgggctattctggacagttgaaaagtaggaagcctttc atgatacctgaaaatgaatttcaccacaaagacccacctgccaggaatgctgtacctgca acagtacaaaatgggccaggtggtgctgggatgcctacgtctctcacaataaatacagtt agactggaagagggcactactgaggagactgataagctaaaggagaagtctcagggtgtg gtgaaagttattaataaaactgtcaacgctacaccgaaggtgacaacaagcaatggaaac agtgcatctaatagcaaaattattaaagagaaagatgataaagagaaaagcgggaaggaa aaagataaagaaaaaaaagacaagactccagctgccactccggagatgaaggcacttggg aaagatgggaaagataaaccgaaggaagaacgggcaaacaaagacgagaaagcaagagag atcaaggagaaaacgccaaaatctgacaaagataaggaaaaagtgaagaaagaagaaaaa gcttcaaaagaggaaaagtccaagacggttgttaccatcattgagtcaaagtcaactgca gaaaaggagagagaaaaggagccatccagagaaagagatctagcgaaggagatgaaatcc aaggaaaatgctaaaggaggagaaaaggtgccagtagctgggtccttgaagtcacctgtt ccccgatcagaaacatcagaatctgaaagggaacaaaaacgccgcaaagttgatacacat tcttctccgtcacattcctcaacagtaaaggacaacctcaacgaactcaaggactcttca gcaaagcactacgtaaaccacactactccaacactgtccaagagtaaggagagagaagtg gagaagaaagatttggacaagtcaagggaaagatccagagagagagagaagaaagatgaa aaggacaggaaagatcgaaaaagggatcattcaaacagtgaccgagaggtaccgcaggat tcaactaaacgacgcaaagaggaaaacggcacaactggttcttcaaaacacagcaaaagt gaaagtccttctgattcccctcgcttaaatgaaaaagagaaggataaaaacaaatcaaaa tcttcaggaaaagagaaaggtgattcaatcaaggcagaaaagatggagaagagctcctcc ggtagcaaaaaggaatcaagacatgataaagaaaaagcagagaagaaagaaaaacgggac agtactggggggaaagaagaaaagaaacatcataaatcttcagacaagcacagataa

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