Corvus brachyrhynchos (American crow): 103621845
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Entry
103621845 CDS
T08418
Symbol
HDAC4
Name
(RefSeq) histone deacetylase 4 isoform X1
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
cbrc
Corvus brachyrhynchos (American crow)
Pathway
cbrc04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
cbrc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
103621845 (HDAC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cbrc03036
]
103621845 (HDAC4)
Enzymes [BR:
cbrc01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
103621845 (HDAC4)
Chromosome and associated proteins [BR:
cbrc03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
103621845 (HDAC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
Motif
Other DBs
NCBI-GeneID:
103621845
NCBI-ProteinID:
XP_017598887
LinkDB
All DBs
Position
Unknown
AA seq
1102 aa
AA seq
DB search
MVGTPLLPGPAQLWGRLCLPDGLSGRDQPVELLNPPRVNHMPSSVDVSTALPLQVAPSSV
PMDLRLDHQFSMPVTEPTLREQQLQQELLALKQKQQIQRQILIAEFQRQHEQLSRQHEAQ
LHEHIKQQQEMLAMKHQQELLEHQRKLEQHRQEQELEKQHWEQKLPQLKNKEKGKESAVA
STEVKMKLQEFVLNKKKALAHRNLNHCISSDPRFWYGKTQHSSLDQSSPPQSGVSGTYNH
PVLGMYDSKDDFPLRKTASEPNLKLRSRLKQKVAERRSSPLLRRKDGPVVTALKKRPLDV
TGTADSACNSAPGSGPSSPNNSSNNISTENGIAGSVTSIQAETSLAHRLVNREGSVTQLP
LYTSPSLPNITLGLPATGPSSAGQAQQDAERLAIPALQQRISLFPGTHLTPYLSTTTLER
DGGTAHNPLLQHMVLLEQPTAQTPLVTDWYLSGLPLHAQPLVGGERVSPSIHKLRQHRPL
GRTQSAPLPQNAQALQQLVIQQQHQQFLEKHKQQFQQQQLHINKIISKPTEPARQHESHP
EETEEELREHQALLEEPYGDRAAGQKEAPALASVVQVKQEPIESDEEEAEPQQELESGQR
QAEQELLFRQQALLLEQQRIHQLRNYQASLEAAGMPVSFGGHRPLSRAQSSPASATFPMS
VQEPPTKPRFTTGLVYDTLMLKHQCTCGNTNSHPEHAGRIQSIWSRLQETGLRGKCECIR
GRKATLEELQTVHSEAHTLLYGTNPLNRQKLDSKKLLGSLTSMFVRLPCGGVGVDSDTIW
NEVHSSGAARLAVGCVIELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAIAA
KLLQQRLNVSKILIVDWDVHHGNGTQQAFYNDPNVLYISLHRYDDGNFFPGSGAPDEVGT
GAGVGFNVNMAFTGGLDPPMGDTEYLTAFRTVVMPIANEFAPDVVLVSSGFDAVEGHPTP
LGGYNLSAKCFGYLTKQLMGLAGGRVVLALEGGHDLTAICDASEACVSALLGNELDPLPE
KVFQQRANANAVHSMEKVIEIHSKYWHSLQRFASTVGYSLVEAQKCENEEAETVTAMASL
SVGVKPAEKRPEDEPMEEEPPL
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atggtcgggacgccgctgctccccgggcccgcgcagctctgggggcggctgtgcctgcca
gatgggctttctggcagagaccagccagtggagctgttgaatccacctcgagtgaaccac
atgcccagctctgttgacgtgagcacagcgctgcccttgcaagtggcgccgagctcggtg
cccatggacctgcggctggaccaccagttctccatgccggtgacggagcccacgctgcgc
gagcagcagctgcagcaggagctgctggccctcaagcagaagcagcagatccagaggcag
atcctgatcgccgagttccagcggcagcacgagcagctctcccggcagcacgaggcgcag
ctgcacgagcacatcaagcagcagcaggagatgctggccatgaagcatcagcaggagctg
ctggagcaccagaggaagctggagcagcacagacaggagcaggagctggagaagcagcac
tgggagcagaaactgccgcagctgaaaaacaaagagaaagggaaagagagtgcagtggca
agcacagaagtgaagatgaagctgcaggaatttgtgttaaacaagaagaaggctctggcc
caccggaatctcaaccactgcatatccagcgaccctcgcttctggtacgggaagacccag
cacagctctctggaccagagctccccaccccaaagcggcgtctccggcacctacaaccac
ccagtcctggggatgtacgattccaaagacgacttcccactcagaaaaacagcctctgag
cccaacctgaagctgcgctccagactaaagcagaaggttgctgagaggaggagcagcccc
ctcctgcgcaggaaggacgggcccgtggtgacggcgctcaagaagcgcccgctggacgtc
acaggtacggcggactcggcatgcaacagtgctcctggatctggtcccagctctccgaac
aacagctccaacaacatcagcaccgagaacggaattgcaggatcagtcacgagtatccaa
gcagagaccagcctggctcacagacttgtgaaccgcgagggctccgtgacgcagctcccg
ctctacacctcgccctccctgcccaacatcacgctaggactgcctgccaccggcccttcc
agcgcgggacaagcccagcaggacgcggagaggctcgcaatcccagccttacagcagcgg
atctccttattccctggcactcacctcactccctacctgagcactacaacgttggagagg
gatgggggaactgcacataaccctctcctgcagcacatggtcttactggaacagccaact
gcacaaacgcccctggtcacagactggtatctttcaggactgcccctgcacgcacagccc
ctggtgggtggagagagggtctccccttcgatccacaagctgcggcagcaccgcccgctc
gggcgcacccagtctgctcccctgccccagaacgcccaggccctccagcagctggtgatc
cagcagcagcaccagcagttcctggagaaacacaaacagcaattccagcagcagcagctg
cacatcaacaagatcatatccaaacccacggagccggcgcggcagcacgagagccacccc
gaggagacggaggaggagctgcgcgagcaccaggccctgctggaggagccctatggcgac
agggccgcgggccagaaggaggccccagcgctggccagcgtggtgcaggtgaagcaggag
cccatcgagagtgacgaggaggaggcagagccgcagcaggagctggagtccgggcagagg
caggcggagcaggagctgctcttccgccagcaagccctgctcctggagcagcagcggatc
caccagctgaggaactaccaggcatcgctggaggcggccggcatgcccgtgtccttcggg
ggacaccggcccctgtcccgggcacagtcctcccccgcctcggccaccttccccatgtcc
gtgcaggagccacccactaagccaaggttcacaacaggccttgtgtacgacacgttgatg
ctgaagcaccagtgcacctgtggaaacaccaacagccaccccgagcacgcgggcaggatc
cagagcatctggtccaggctccaggagacggggctgcggggcaagtgtgagtgcatccgt
ggcaggaaggcgacgctggaggagctgcagacggttcactcggaagcccacacgctgctc
tacggcacaaaccctctgaacaggcagaaactggacagcaagaagctcctaggttcccta
acgtcgatgtttgtcaggctgccttgcggtggtgtcggggtcgacagtgacaccatttgg
aacgaggtgcactcgtccggcgccgctcgcctggccgtgggctgtgtcatcgagctggtg
ttcaaggtggccacgggagaactgaagaatgggtttgctgttgtccggcccccgggtcac
cacgcggaggagagcacacccatgggtttctgctattttaactcggtggcaatcgcagcc
aagctgctccagcaaaggctcaacgtgagcaagatcctcatagtggactgggatgtccac
cacgggaatggtactcagcaggccttctacaacgatcccaatgttctttatatctcacta
catcgctacgacgacggcaacttcttcccaggcagcggtgctcccgacgaggtgggcaca
ggagcaggagttggtttcaatgtgaacatggcatttactggtggcctggatccgcccatg
ggagacacggaatatttaactgctttcaggacagtagtgatgcccattgccaacgagttt
gcccccgatgttgtgctggtgtcatccggtttcgatgctgtggaagggcaccccacacct
ctcggaggatataatctgtcagcaaaatgcttcgggtacctgacgaagcagctgatgggc
ctggccgggggccgcgtcgtgctggccctcgagggtggccacgacctcactgccatctgt
gacgcctcggaggcctgtgtgtctgccctgctgggaaacgagcttgaccctcttccagag
aaggttttccagcagagagcaaatgctaacgcggtgcattccatggagaaagtcatcgag
atccacagcaagtactggcattccctgcagcgtttcgcctccacggtgggatattccctg
gtggaggcccagaagtgtgagaacgaggaggcggaaacggtgacggccatggcatcgctg
tcggtgggcgtgaagccagcggagaagcgacctgaggacgagcccatggaagaggagccg
cccctgtag
DBGET
integrated database retrieval system
