Corvus brachyrhynchos (American crow): 103622273
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Entry
103622273 CDS
T08418
Symbol
PRDM16
Name
(RefSeq) PR domain zinc finger protein 16 isoform X1
KO
K22410
[histone H3]-lysine9 N-methyltransferase [EC:
2.1.1.367
]
Organism
cbrc
Corvus brachyrhynchos (American crow)
Pathway
cbrc00310
Lysine degradation
cbrc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cbrc00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
103622273 (PRDM16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cbrc03000
]
103622273 (PRDM16)
03036 Chromosome and associated proteins [BR:
cbrc03036
]
103622273 (PRDM16)
Enzymes [BR:
cbrc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.367 [histone H3]-lysine9 N-methyltransferase
103622273 (PRDM16)
Transcription factors [BR:
cbrc03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
103622273 (PRDM16)
Chromosome and associated proteins [BR:
cbrc03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
103622273 (PRDM16)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
PRDM2_PR
zf-C2H2_jaz
SET
zf-C2H2_6
zf-C2H2_11
zf-H2C2_5
Zap1_zf1
zf-BED
C2CH-4th_BIRD-IDD
zf-C2H2_15
Motif
Other DBs
NCBI-GeneID:
103622273
NCBI-ProteinID:
XP_017599577
LinkDB
All DBs
Position
Unknown
AA seq
1265 aa
AA seq
DB search
MRSKARARKLPKSDSEIVNNMYETDPDLLAGESAEEETEDSIMSPIPVGPPSPFPTSEDF
TPKEGSPYEAPVYIPDDIPIPPDFELRESSIPGAGLGIWAKKKIEVGERFGPYMAVQRST
LKETNFGWEQILTDPEVTSQEGSIKKIPDALGTEKFCGDGGQSGAGNWLKYIRVSCSCDE
QNLAVCHINEQVYYKVIKEIEPGEELLVCLKEGGYSLGNMAPSMEEEPSFRCEDCDELFQ
SKLDLRRHKKYGCSAVGALYDSLSDEIKQEGLGDGQVHECKDCERMFPNKYSLEQHMVIH
TEEREYKCDQCPKAFNWKSNLIRHQMSHDSGKRFECENCVKVFTDPSNLQRHIRSQHVGA
RAHACPDCGKTFATSSGLKQHKHIHSTVKPFICEVCHKSYTQFSNLCRHKRMHADCRTQI
KCKDCGQMFSTTSSLNKHRRFCEGKNHYSPAGIFAPGLPLTPTSMMDKSKPSPNLNHASL
GFNEYFPSRPHPGGLPFSPTPPAFPALTPGFPGIFPPSLYPRPPLLPPTQLLKSPLNHTP
DAKLPSPLGNPALPLISAVSNSNQAPSGEEKCESSLENSYLEKLKARNSDMSDGSDFEDV
NTTTGTDLDTTTGTGSDLDSDAESDRDKTKDKSKQMETKPDFVSSSVSASSTNATSEIPL
FYSQHSFFPPPEEHLLPTTGAANDSIKAIASIAEKYFGPGFMGMQEKKMGSLPYHSMFPF
QFLPNFPHSLYPFTERTLNHNLLVKAEPKSPRDLHKVGGTSSESPFDLTTKPKEIKPILP
PPKVLPAPSSGEEQPLDLSIGNRIRASQNGGREPRKNHIYGERKLMASEVLPKISQSQLP
QQPSLHYAKPSPFFMDPIYRVEKRKVTDPVGALKEKYLRPSPLLFHPQMSAIETMTEKLE
SFAAMKADSGSSLQPLPHHPFNFRSPPPTLSDPILRKGKERYTCRYCGKIFPRSANLTRH
LRTHTGEQPYRCKYCDRSFSISSNLQRHVRNIHNKEKPFKCHLCNRCFGQQTNLDRHLKK
HEHENVPVSQHSGVITNHLGTSASSPNSESDNHALLDEKEDSYFSEIRNFIANSEMNQAS
ALADKRPEIQDIDGNSQCHGLANEKTEDVDDEDEELEEEDDDSLTGKSQDETASPTAEPR
GAFEDEEDEEPTSLTMSFDHTRRCIEEDEAGLLDLEQMPNFGKGLDLRKAAEEAFEVKDV
FNSTLDSETIKQTLYRQAKNQAYAMMLSLSENAPLHTSSQNSLGAWLDMAGAASESGTFN
PINHL
NT seq
3798 nt
NT seq
+upstream
nt +downstream
nt
atgagatccaaggcgagggcgagaaaactgcccaaaagtgacagcgagattgtaaataat
atgtacgagaccgaccccgatctccttgctggcgaaagcgcagaggaggaaactgaggac
agtataatgtcccccatccctgtgggacctccgtcaccctttcccaccagtgaggacttc
actcccaaggagggctcaccctatgaagctcccgtctacattcctgatgacattccaatc
ccaccagattttgaactcagagaatcttcgatcccaggggcagggctagggatttgggcc
aaaaagaagattgaagttggggaaagatttggaccctatatggcagtacagaggagcaca
ttaaaggaaacaaactttggatgggagcaaatactgactgatcccgaggtgacctcccag
gagggcagtataaaaaagattcccgatgccctgggcactgagaagttctgtggcgacggc
ggccagagcggggccgggaactggctgaagtacatccgagtgtcgtgctcctgcgacgag
cagaacctggcagtgtgccacatcaacgagcaggtctattataaagttattaaagagatc
gagccgggagaagagctcctggtgtgcctgaaggaaggaggttattccctcgggaacatg
gcacccagcatggaagaggagccctcgttccgctgcgaggactgcgatgagctgttccag
tccaagctggacctgcggcgccacaagaagtacggctgcagcgccgtgggggccctgtat
gacagcctcagtgacgagatcaagcaggaaggcctcggagatggacaggtccacgagtgc
aaggactgcgagaggatgttccccaataaatacagcctggagcagcacatggtgatccac
accgaggagagggagtacaagtgtgaccagtgtcccaaggctttcaactggaaatccaac
ctgattcgtcaccagatgtctcacgacagtgggaaacggtttgaatgtgaaaactgtgtt
aaggtgtttacggaccccagcaacctccagcggcacatccgctcgcagcacgtgggcgcg
cgggcccacgcctgccccgactgcggcaagaccttcgccacctcctcgggcctcaagcag
cacaagcacatccacagcactgtcaaacctttcatatgtgaggtctgtcacaaatcctac
acgcagttctccaacctgtgccgccacaagcggatgcacgcggactgccgcacccagatc
aagtgcaaggactgcgggcagatgttcagcactacctcctccctcaacaagcaccggcgc
ttctgcgaggggaagaaccattacagccccgccggcatcttcgcccccggcctccccctc
acgcccacctccatgatggacaaatccaagccctctcccaacctcaaccacgccagcctg
ggctttaacgagtatttcccatcccgcccgcacccgggcgggctcccgttctcgcccaca
cccccagccttccccgccctcaccccgggattcccggggatttttccaccctctctgtac
cccaggcctcccttgttaccacccacgcaactgctcaaaagtcccctcaaccacactccg
gacgcgaagctccccagccccctcgggaacccagcactcccgctgatctccgcagtgagc
aacagcaaccaggccccttcaggggaggagaaatgtgaaagcagcctggaaaactcctac
ctggagaagctaaaagccaggaacagtgacatgtccgatggcagtgactttgaggatgtc
aatacaaccacgggcacggatctggacaccacgactggcaccggctctgacctggacagt
gacgcggagagtgacagggacaaaacgaaagacaagagcaaacaaatggagaccaagcca
gatttcgtcagcagctcggtgtctgccagttccaccaacgccacgagcgagatccctctc
ttctattctcagcattccttctttcctccccccgaggagcacctgctgcccaccacgggg
gcagccaatgactcaattaaagctatcgcctccatcgcagagaagtattttgggcctggc
tttatggggatgcaggagaaaaagatgggttcgctcccgtatcattccatgttccccttc
cagttcctccccaattttccccactccctctaccctttcacggagcggaccctcaatcac
aacttgctggtcaaggcagaaccaaagtcacccagggacctccacaaagtcggcggcaca
agctcggagtcccccttcgatctcaccacgaagccaaaagagattaaaccaatcctgccg
ccccccaaggtcctcccagccccgtcctcaggggaggagcagccactggatctgagcatt
ggcaaccgcatccgagccagccagaacggagggagagagccacggaaaaaccacatttat
ggggagaggaagctgatggcaagtgaggtcttacctaagatttcccagtcccagctgcct
cagcagccttccctgcactacgctaagccatcgccctttttcatggaccccatctacagg
gtggagaagcggaaggtgacagaccccgtgggtgccctcaaggagaagtacctgcgaccc
tccccgctgctttttcacccccagatgtcggccatcgagacgatgacagagaaactggag
agctttgcagccatgaaggccgactctggctcgtccctgcagccccttccccaccacccc
ttcaacttccgatcgccgccgcccacgctctccgaccccatcctgcgcaagggcaaggag
cgctacacctgcaggtactgtggcaagatcttcccacgctcagccaacctgacgaggcat
ctgcggacacacactggagagcagccttacaggtgtaaatactgtgacaggtcattcagc
atttcctccaacctgcagcggcacgtccggaacatccacaacaaggagaagccattcaag
tgccacctgtgcaacaggtgcttcgggcagcagaccaacctcgacaggcacctgaagaag
cacgagcacgagaacgttccagtgagccagcactccggagtcatcaccaaccacctcggg
accagcgcctcctcccccaactcggaatcagacaaccatgcacttttagacgaaaaagag
gattcctatttctcggaaatcagaaattttattgcaaatagcgagatgaatcaagcgtca
gctttagcagataaaaggccagaaatccaggatattgacggcaattcccagtgccacgga
ctagcaaatgagaaaacagaagatgtggatgatgaggacgaagaactggaagaggaagat
gacgacagcctgacggggaagtctcaggacgagacggcgtcgcccacggcagagccccga
ggagcattcgaggatgaggaggatgaggagcccacgtctctcaccatgagctttgaccac
acccgaaggtgtattgaggaggacgaagccggcctgttagatttggagcagatgccgaat
tttgggaaggggctggatctccgcaaagcagccgaggaagcatttgaagttaaagatgtg
tttaattccaccttagactctgagacaataaaacagactctgtacaggcaggctaaaaac
caggcttatgcaatgatgctgtccctgtctgagaacgctcccctccacacgtcctcccag
aactctctgggggcttggttggacatggcaggagcagcttcagagtcggggacctttaac
cccatcaaccacctctga
DBGET
integrated database retrieval system
