Corvus brachyrhynchos (American crow): 103622334
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Entry
103622334 CDS
T08418
Symbol
NPHP4
Name
(RefSeq) nephrocystin-4
KO
K16478
nephrocystin-4
Organism
cbrc
Corvus brachyrhynchos (American crow)
Brite
KEGG Orthology (KO) [BR:
cbrc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cbrc03037
]
103622334 (NPHP4)
Cilium and associated proteins [BR:
cbrc03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
103622334 (NPHP4)
BRITE hierarchy
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Other DBs
NCBI-GeneID:
103622334
NCBI-ProteinID:
XP_017599477
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Position
Unknown
AA seq
1294 aa
AA seq
DB search
MPRDASPKLVCCALQGAEYQLRLSLFDATYHHFFGRTWRSSWRAAGAAPPRSARAAFNEV
VYFHTSLNHPGIAAVVEVVVMGGKGDGGSQHLSCGFGIIPLFHGGSEVTDPATEDRALKL
YHGTPRALLHPRFQDPVEKNKYMTVMEKSHLQYALKSHQPLEAIFHLLPENLLISGLQTV
PGLLPARGDTGDCLQKPRLMKTVTCYLERLFIRLYPSLEEFEEELLDLLNSDRLLQANTM
PDGEEVVVRERRLHVGVHNGLRFVRAPQVTVLVPEAELSPGGSRGGPSSGARDAGQALAL
RSRIQLSEMVPHPAFGVCFQLEYVFCSMGRAGGKALSGSARGEVADMRSVRWAVWSPVPG
TGDTEVVLPLHGGARRGPCRALVYQTPLSSRSSRQGKHVESGTVQFHVSTVSEEHLVTAA
EILCKDRDESKQPPTPSLRVPTPRQVPVSPRGPGLSVSQLVASPRGTGQTLQQDAGITHL
EVDLGSPDAEPCASDQLRALPFTPLQLPMAAVGLQACSSRVSLSRASLARLHAAGFPDIL
DCNQEPVEISEPVELGSFNLRLEEADPLQGNEIVLQFLAFGRDAQGSTEGPWPRTVFLTF
QFYRFPPVTTPRLQLVSTDRGPATGLAVLAQLLVRVNEDGTLSTRPPGLQLKYMVDPAFL
RPGEQRWFLRYLAEHSLQIDVWDGDSLLHVGSAAVKLEPLLRQGQRAVRTYHELEVATTE
YEPDGTVMGREALRHGALRPLGVRVAVRGRLHLCLANVGHPCEETPGQLPSQTHIVTAPD
STVTTPRGSWRSPNTAGGGRTAWARRLVDVDNELEAALRSRRPEGWPKQRTWDLQVINAY
RDHIKGESIYQMLSQAITATRTVHAVLGTAEFFEFALKNPYSVQHTVTIEVDHPELSVIL
DPREWRHFKELTKSVTPVEEDMFHLRDDLKPQVYLRPSETVRIPFKYQTFSADPAVVAAQ
VGTGPAKQTKLIQVSFQVSGGKPIALLRVKVEPQPHVVDQTFRFYHPELTFLKKTIRLPP
WHTLPGTPVGVPGGQPEMFVRCSDPDIICETKSLGPGEPQDIFLKVAGGPSPQIKKFFVA
IYTDTWLAAPVQIWQFYLHSLQRLDVACTAGQLTRLSLLLRGTAAPRRVQAFTSHPQELE
VDPNGAFLLPANGIQDLYIGVRPRRAGSKFIYLNLVDVESHQLVSSWLLCLSCRQPLISK
AFEISLPAGGGRGCNKRITYTNPYPSPRLYFLCTNRPDLLQFKEDSFEVAGGEVYTIGLR
FAPSPTVGEEEILIHINDHEDKNEETFCVKVLYQ
NT seq
3885 nt
NT seq
+upstream
nt +downstream
nt
atgccccgtgatgcatccccaaagctggtgtgttgtgccttgcagggagcggaataccag
ctgcgcctctcccttttcgatgccacctaccaccacttctttgggaggacgtggaggagc
agctggcgagctgccggcgctgccccaccgcgctcggccagggcggcattcaatgaggtc
gtttatttccacacctccttgaaccaccctggcatcgctgctgtcgtggaagtggtagtg
atgggtgggaaaggggatgggggctctcagcatctttcctgtgggtttggaatcatcccc
ctcttccacggtggatcagaggtgacagacccggccactgaggacagagcgctgaagctg
taccatgggacgccgcgtgccctactgcacccacgcttccaggaccctgtggaaaagaac
aaatacatgacagtgatggagaagagccacctgcagtatgccctgaagtcccaccagccc
ctggaagcgatatttcacctcctgcctgaaaacctgctgatatctgggctgcagactgtt
cctggcttgctgccggcacgtggagacacaggcgactgcttgcagaagccccggctgatg
aagacggtcacctgctatctggagcggcttttcatccggttgtacccttccctggaggag
tttgaggaggaactgctggatttactgaacagcgatcgcttacttcaggctaacaccatg
ccggacggtgaagaggtggtggttcgggagcggcggctgcacgttggcgtccacaatggc
ctgcgctttgtccgggcaccacaggtcacggtgctggtgccagaggcggaattgtcacct
gggggcagccggggggggcccagctctggagccagggatgcaggtcaagccctagcgctg
aggagccgcatccagctgagtgaaatggtccctcacccggcatttggggtctgcttccag
ctggaatatgtcttctgcagcatggggagagccggtgggaaggccctgtctggcagtgcc
cgcggtgaggtggccgacatgcgctcggtgcgctgggctgtctggagccctgtcccgggc
accggtgacaccgaggtggtcctgcccctgcatggtggtgcccgccgtggcccctgccga
gccttggtctaccagaccccgctgagcagcaggagctcccggcaggggaagcacgtggag
tctgggactgtccaattccatgtttctactgtttcggaagaacatcttgtaactgctgcg
gagatcctatgtaaagacagggacgagtcgaagcagcctcctacgccatcgctgagagtg
ccaaccccacggcaagtgccagtctccccacggggaccagggctctcggtgtcacagctc
gtggcctcgccacggggcacaggccagaccctgcagcaggatgcgggcatcacccacctg
gaggtcgacctcggctcaccggatgcagagccctgtgccagcgaccagctgcgggcgctg
cccttcaccccgctgcagctgcccatggctgctgtggggctgcaggcatgcagttcccgt
gtgtccctgtctcgcgcctcgctggcgcgcctgcacgccgccggctttccggacatcctg
gactgtaaccaggagccagtggaaatctcggagccagtggagctgggcagtttcaacctg
cggctggaggaagctgaccctctacaaggcaatgaaatagtcctgcagttcctggcgttt
ggcagggatgcccagggtagcacggaggggccgtggccgaggactgtcttcctcaccttc
cagttctaccgtttcccaccggtcaccacgccccggctgcagctggtcagcacggacagg
gggccggcaaccgggctggctgtgctggcgcagctccttgtccgggtcaacgaggacggg
accctcagcaccagaccaccgggcttgcagctgaagtacatggtggatccggctttcctg
cggcccggggagcagcgctggttcctgcggtacctggccgagcacagcctccagattgat
gtctgggatggagactccctgctccatgttgggtctgctgctgttaaactggagcccctg
ctgcgccagggccagagggctgtcaggacctaccatgagctggaggtggccacgactgag
tacgagccggacgggacggtgatgggccgcgaggctctgcggcacggtgccctgcggccc
ctcggtgtccgtgtggctgtgaggggccgcctccacctctgcctggccaatgttggtcac
ccgtgtgaggagaccccagggcagctgccatcccaaactcatattgtcactgcaccagac
agcactgtcaccaccccacgtggcagctggcgctccccgaacactgctggtggtgggagg
acggcgtgggcacggaggctggtggatgtggacaatgagctggaggccgcactgcgcagt
cgccggccagaaggctggccgaagcagcgtacctgggacctgcaggtcatcaatgcctac
cgggatcacatcaagggagagagcatctaccagatgctcagccaggccatcacagccacc
cgcactgtccacgccgtgctggggacagctgagttctttgagttcgccctgaagaaccca
tacagcgtccagcacaccgtgaccattgaggtcgaccaccctgagctcagtgtcatactg
gacccgagggagtggcgccacttcaaagagctgaccaagagtgttacaccggtggaggag
gatatgttccatctccgtgatgacctcaagcctcaggtctacctgcgccccagtgagact
gtccgcatccccttcaaataccagaccttctctgcagaccccgccgtggttgcggcacag
gtaggcacgggcccggccaagcagacaaagctcatccaggtctccttccaggtgagcggg
gggaagcccattgcgctcctgcgggtgaaggtggagccgcagccccatgtggtggaccag
accttccgcttctaccacccagagctcactttcctgaagaaaaccattcggctgcctccc
tggcacaccctccctggcacgccggtgggggtgccaggcgggcagcccgagatgtttgtt
cgctgcagcgaccctgacatcatttgtgaaaccaaatccttggggcctggcgagccacag
gacatcttcctcaaagtagctggaggaccaagcccgcagatcaaaaagttctttgttgct
atttatacggacacctggctggcagcgcctgtccagatctggcagttctacctgcactcg
ctgcagcgcctggacgtcgcctgcacggccgggcagctcacccgcctctccctgctgctg
cgcggcaccgcggccccgcggagggtgcaggccttcacctcccacccccaggagctggag
gtggatccaaacggtgccttcctcctccctgccaatggcatccaggacctgtacatcggt
gtgaggccacggcgggctggcagcaagttcatctacctcaacctggtggatgtggagtcc
caccagctggtgtcctcctggctgctctgcctgtcctgcaggcagcctctcatctccaag
gcctttgagatctcgctgcccgcgggaggtgggagaggctgcaacaagcgcatcacctac
accaacccctacccctcaccccggctctacttcttatgcaccaaccgccccgacctgctg
cagttcaaggaggactccttcgaggtggccggaggggaggtgtacaccattggcctgcgc
ttcgccccgagcccgaccgtgggggaggaggagatcctgattcacatcaacgaccacgag
gacaagaatgaggagaccttctgcgtgaaggtcctgtaccagtga
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