Corvus brachyrhynchos (American crow): 103622371
Help
Entry
103622371 CDS
T08418
Symbol
POLR2B
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
cbrc
Corvus brachyrhynchos (American crow)
Pathway
cbrc03020
RNA polymerase
cbrc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cbrc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
103622371 (POLR2B)
09124 Replication and repair
03420 Nucleotide excision repair
103622371 (POLR2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cbrc03021
]
103622371 (POLR2B)
03400 DNA repair and recombination proteins [BR:
cbrc03400
]
103622371 (POLR2B)
Enzymes [BR:
cbrc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
103622371 (POLR2B)
Transcription machinery [BR:
cbrc03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
103622371 (POLR2B)
DNA repair and recombination proteins [BR:
cbrc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
103622371 (POLR2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
103622371
NCBI-ProteinID:
XP_008639532
UniProt:
A0A091F427
LinkDB
All DBs
Position
Unknown
AA seq
1174 aa
AA seq
DB search
MYDADEDMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DAPPIDLQAEAQHASGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTY
SAPLYVDITKTVIKEGEDQLQTQHQKTFIGKIPIMLRSTYCLLNGLTDRDLCELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENSSRPTSTIWVSML
ARGGQGAKKSAIGQRIVATLPYIKQEVPIIIVFRALGFVSDRDILEHIIYDFEDPEMMEM
VKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQ
KFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLS
HLRRLNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLRKLRRQMDIIVSE
VSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKKRHIDQLKEREYNNYSWQDLVASG
VVEYIDTLEEETVMLAMTPDDLQEKGVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSP
RNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIV
AIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGYDQEEVFEKPTRETCQGM
RHAIYDKLDDDGLIAPGVRVSGDDVIIGKTVTLPENEDELESTNRRFTKRDCSTFLRTSE
TGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEG
ITPDIIINPHAIPSRMTIGHLIECLQGKVSANKGEIGDATPFNDAVNVQKISNLLSDYGY
HLRGNEVLYNGFTGRKITSQIFIGPTYYQRLKHMVDDKIHSRARGPIQILNRQPMEGRSR
DGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGC
RNKTQISLVRMPYACKLLFQELMSMSIAPRMMSV
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtacgacgcggacgaagatatgcaatatgatgaagacgatgatgaaattacccccgac
ctgtggcaagaagcctgctggattgttattagctcctattttgatgaaaagggtttagtc
aggcaacagctggattcctttgatgagtttattcagatgtctgtgcagagaattgttgaa
gatgctccaccaattgatttacaagctgaagcccagcatgcctcaggagaagtggaagag
ccaccccggtatctgttgaagtttgaacaaatctatctctccaaacctacacattgggaa
agagatggagcaccctcacctatgatgccaaatgaagccagactgagaaatcttacgtat
tctgcccccttgtatgtggatataactaaaacagttattaaagaaggagaggaccaattg
cagacccagcaccagaaaacctttataggaaaaatccctatcatgttgcgttccacgtac
tgtttgctgaacggcttaactgaccgtgatctttgtgagctgaacgagtgtccgcttgat
cctggtggctacttcatcattaacggatcagaaaaggttctgattgctcaggagaagatg
gctacaaacacagtgtatgtgtttgcaaagaaagattcaaaatatgcctacacaggagag
tgtagatcatgtctggaaaattcctctcgaccaacaagtactatatgggtcagcatgctg
gccagaggtggacagggtgcaaagaagagtgccattggtcagcgcattgtagcaactctg
ccgtatatcaaacaagaggtgcccatcatcattgtcttccgtgcactcggctttgtgtcc
gatagggacattctggagcacatcatatatgattttgaagacccagaaatgatggaaatg
gtcaaaccttctctggatgaagcatttgtcattcaggagcaaaatgttgccctaaacttc
attggctcaagaggtgccaagccaggtgtcaccaaagaaaagagaatcaagtacgccaaa
gaagtcttgcagaaagaaatgctcccacacgttggagtcagtgacttctgtgaaaccaaa
aaggcctattttctagggtatatggttcatagattgttgctggcagcactgggaagaaga
gagctggatgacagagatcattatggcaacaagagactggatcttgctgggccactcttg
gctttcctgttcagaggaatgttcaagaatttgctgaaggaagtgagaatatatgcacag
aagttcattgacagagggaaagattttaacttggagttggcaattaaaacaagaattatt
tcagacggtttgaaatactcattggcaactggaaactggggtgaccagaagaaagctcat
caggccagagcaggagtatctcaggtgttgaaccgcctgacttttgcatccacactttcc
cacctgagacgcctgaattctccgattgggagagatggaaaactggccaagccccggcag
ctgcacaacaccctgtggggaatggtttgccctgctgagacccctgagggtcatgcagtc
ggacttgtgaagaacttagccttgatggcttacatttctgtggggtctcagccatccccg
attctggaattcttggaggagtggagtatggaaaacctagaagaaatctctccagcagca
atagctgatgctaccaagatctttgttaatggctgctgggtaggaatacacaaagatcca
gagcagctcatgaataccctaaggaagcttcgtcgtcagatggacatcattgtgtcagag
gtctcgatgattagagatattcgtgagcgagaaatccgcatctacaccgatgcaggcaga
atttgtcggccccttttaattgtggagaaacagaagttgctgctgaagaaaaggcacatt
gaccagctgaaggaacgagagtataacaactacagttggcaggatcttgtggccagtggt
gtagtagagtacattgacaccctggaagaagagactgtgatgctggcaatgactccagat
gacttgcaagagaaaggtgtggcgtattgttcaacatacacacactgtgagattcaccca
tccatgatcctgggagtgtgtgcatctattatccctttccctgatcacaaccagtctccc
aggaacacgtaccagtctgctatgggtaaacaggctatgggagtctacattaccaacttc
catgtccgtatggacacgctggcacatgtgttgtattatccccagaagcccctggtaaca
acacgctccatggagtacttgaggttcagagagttaccagcaggtatcaactcgatcgta
gccattgcatcatacacaggctataaccaagaagactctgtcatcatgaaccgttctgct
gttgacagaggctttttcagatctgtgttctatcgctcatacaaagagcaggagtctaag
aaagggtatgaccaagaggaagtttttgaaaagcccacacgtgaaacttgccaaggtatg
agacacgcaatctatgacaaacttgatgatgatggtttgatagcccctggggtccgtgtg
tctggggatgatgtcatcattggcaaaacagtcacactgccagaaaatgaagacgagctg
gaaagcacgaacagacgcttcaccaagagagactgcagcaccttcctgcggaccagcgag
actgggattgtagatcaggtcatggtaaccctgaaccaggaagggtacaagttctgcaag
attagggtacgttctgtaagaattccgcaaattggagataaattcgctagcagacatggt
cagaaaggaacctgtggtatccagtacaggcaagaggatatgcccttcacatgtgaaggc
atcacacctgatatcattatcaacccccatgccatcccttcccgtatgaccattggtcac
ttgattgagtgtcttcagggcaaggtgtctgcgaacaagggagaaattggtgatgctaca
ccctttaatgatgctgtcaatgtgcaaaagatttctaatcttttatcagattatggctat
catctaagaggaaatgaggtcctctacaatggcttcactggtcgaaaaatcacatcccag
atcttcattggtcctacctattaccagcgtttgaagcacatggtggatgacaaaatccat
tctcgtgcaagagggccaatccagatccttaacagacagcccatggaaggcagatctcgt
gatggtggccttcgctttggagaaatggaacgagattgccagattgctcatggagcagcc
cagttcttgagagaaaggttgtttgaagcttcagacccataccaagtccatgtgtgtaac
ctctgtggaatcatggcgattgcaaacacgaggactcacacctacgaatgccgcggatgc
cgtaataaaactcagatatctttggttcgaatgccctatgcctgcaaactcctcttccaa
gaactgatgtctatgagtattgcacctcgtatgatgagtgtttag
DBGET
integrated database retrieval system
