Corvus brachyrhynchos (American crow): 103622400
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Entry
103622400 CDS
T08418
Symbol
LRBA
Name
(RefSeq) lipopolysaccharide-responsive and beige-like anchor protein
KO
K24181
lipopolysaccharide-responsive and beige-like anchor protein
Organism
cbrc
Corvus brachyrhynchos (American crow)
Brite
KEGG Orthology (KO) [BR:
cbrc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cbrc04131
]
103622400 (LRBA)
Membrane trafficking [BR:
cbrc04131
]
Endosome - Lysosome transport
Others
Others
103622400 (LRBA)
Endosome - Golgi transport
103622400 (LRBA)
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
103622400 (LRBA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4704
Beach
DUF1088
NBCH_WD40
PH_BEACH
WD40
Laminin_G_3
Neurobeachin
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WDR55
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
SUKH_6
Motif
Other DBs
NCBI-GeneID:
103622400
NCBI-ProteinID:
XP_017599598
LinkDB
All DBs
Position
Unknown
AA seq
2859 aa
AA seq
DB search
MASEGKQVVQPTGDDGGGGAGKEGNAAEGGSVLQPLNPGVPIRGIKMKFAVLTGLVEVGE
VSNRDIVDTVFNLLVGGQFDLEMNFIIQEGEGITCMVDLLDKCDITCQAEVWSMFTAILK
KSIRNLQACTEVGLVEQVLKRIDRADNMIADLLVDMLGVLASYNLTVRELKLFFSKLQGE
KGRWPPHAGKLLSVLKHMPQKYGPDAFFNFPGKSAAAIALPPIAKWPYQNGFTFHTWLRM
DPVNNINVDKDKPYLYCFRTNKGLGYSAHFVGGCLIVTSIKSKGKGFQHCVKFDFKPQKW
YMVTIVHIYNRWKNSELRCYVNGELASYGEITWFVNTSDTFDKCFLGSSETADANRVFCG
QMTSVYLFSEALNAAQIFAIYQLGLGYKGTFKFKAESDLFLDEHHKLLLYDGKLSSAIAF
MYNPRATDAQLCLESSPKDNPSIFVHSPHALMLQDVKAVLTHSIQSALHSIGGVQVLFPL
FAQLDYRQYSSDHIDTTVCSTLLAFIMELLKNSIAMQEQMLSCKGFLVIGYSLEKSSKAH
ISRAVLELCLAFSKYLSSLHNGVPLLKQLCDHVLLNPAIWIHIPAQVQLTLYTYLSTEFI
ATVNIYGAIRRVGTVLLVMHTLKYYYWVVNPQDRSGITPKGIDGPRPTQKEILSLRAYLL
MFIKQLVMKDYGIKEDELQAILNYLLTIHEDDNLMDVLQLLVALMSEHPGSMIPAFDQRN
GLQVVYKLLASQSEGIRVQALKVMGYFLKHLAPKRKAEVMLGHGLFSLLAERLMLQTSLF
TMTTYNVLFEILTEQICTQVIHKQHPDPDSTVKIQNPQILKVIAVLIRNSPQCPETLEIR
RAFLSDMIKLFNNSRENRRSLLQCSVWQEWMLSLCCFNPKTSEEQKITEMVYTIFRILLY
HAIKYEWGGWRVWVDTLSITHSKVTFEMHKESLSQMYKEYQGKGGEGSGVHSLTPIRTIS
GISKETETKGKQQSLELKEDAPAPSCVTDGDTECRTEKKETENSSDGGQQTHSGSNHKEQ
SEGEDRDTTQDLKAVSCVEFSPEPETVKPSVSEISSGIAEAIEDSSKADELVEETVAVAA
ASLAMQTPVERETRTSPEKLEKSAVEVEDEDDFVDLKDESSLPLPSEEFAERNKECGSNE
SKVTKQEETTEKQPESVRLKSEDTEGVDKKKQELTLPETVSSAISETRTTVENANARVAE
PAGASDKRIAKLDVSSVASDTERLELKANTCLEAPLPPRSIPERYLLMDALHSAPFFLKG
GKPLSTATYSPPVPSRQQVSSGQELAAPSDGQRRDTRSTVFRIPEFKWSLMHQRLLTDLL
FSIETDIQMWRSHSTKTVMDFVNSSDNVVFVHNTIHLISQVMDNMIMACGGILPLLSAAT
SATHELENIEPTQGLSVEASLTFLQRLINLVDVLIFASSLGFTEIESEKNMSSGGILRQC
LRLVCAVAVRNCLECQQHAQMKPIGDTGKNQKAVQGFIGSGKSAAKSPVDIVTGGISPIR
DHDRLLQDMDINRLRAVVFRDIEDSKQAQFLALAVVYFISVLMVSKYRDILEPPNERRPP
NQSQSLKESENERNETPAAVMENPSAAFGASASTEDSEGTASLQRRDSGLGEEAAPAQTN
RSGSAAEAGPLSVSAGPDAVSEVLCTLSLEVNKSQEGGSETGTEESKSVASVPAAKNVNV
KDILRSLVSTPADGTAVDAALLPPTFLGVLGNGAAEQPVQFHSFDRSVVVPTKKSNISST
AAIGVPTNAVSVVSSLDSAQEPDLSGESPGRGSSNSKLPSVPTVSSVPEDSASNMSITDR
LEHALEKAAPLLREIFVDFAPFLSRTLLGSHGQELLIEGTSLVCMKSSSSVVELVMLLCS
QEWQNSIQKNAGLAFIELVNEGRLLSQTMKEHLVRVANEAEFILSRQRAEDINRHAEFES
LCAQYSADKREEEKMCHHLITAAKYRDQVTATQLIQKIVNILTDKHGAWGSSAPSRPREF
WRLDYWEDDLRRRRRFVRNPLGSTHPEATLRAAGEHAPDEDILVKGKQSIKSQVLGNQNS
ESEILLEGDDDIMSFMEEREVENLTGPVALSTPAQLVAPKNLSITVSELYFEVDEEDPSF
KKIDPKILAYTEGLHGKWLFSEIRSIFSRRYLLQNTALEIFMANRVGVMFNFPDQATVKK
VVNCLPRVGIGTIFGLPQTRRISLASPRQIFKASNMTQRWQHREISNFEYLMFLNTIAGR
TYNDLNQYPIFPWVITNYESEELDLTLPSNFRDLSKPIGALNPKRAAFFAERYESWEDDQ
VPKFHYGTHYSTASFALTWLLRIEPFTTLFLNLQGGKFDHADRTFSSISRAWRNSQRDTS
DIKELIPEFYYLPEIFVNSNNYNLGVMDDGTVVSDVELPPWAKTPEEFVRINRLALESEF
VSCQLHQWIDLIFGYKQQGPEAVRSLNVFYYLTYEGAVNLSSITDSVLREAVEAQIRSFG
QTPSQLLIEPHPPRSSAMQVYLLLQSPLMFTEQAQQDVIMVLKFPSNSPVTHVAANTQPG
LATPAVITVTANRLFAVNKWHSLPAHQGAVQDQPYQLPVEIDPLIASNTGMHRRQITDLL
DQSIQVHSQCFVITSDNRYILVCGFWDKSFRVYSTDSGKLMQVVFGHWDVVTCVARSESY
IGGNCYILSGSRDATLLLWYWNGKTNIIGDNPRGDFATPRAVLTGHDYEITCAAICAELG
LVISGSKEGPCLIHSMNGDLLRTLEGPERLQGPESCLRPKLIQASREGHCVIYYENGLFC
VFSVNGRLQATMETDDKIRAIQLSRDGQYLLTGGDNGVVMVWQVWDLKQLFAYPGCDAGI
RSMALSYDQRCIMTGMASGSIVVFYNDFNRWHHEYQTRY
NT seq
8580 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtgaaggcaaacaagttgttcagccaacaggtgatgatggaggaggaggagcg
ggaaaagaaggaaatgctgccgaagggggaagtgtgcttcagcctttgaatccaggagtc
cctatccgaggcatcaagatgaaattcgctgtgctgacaggactggtggaagttggtgaa
gtgtccaacagagacatagttgacactgtgtttaatctgctcgtcgggggccagtttgac
ttggaaatgaactttatcatccaagaaggagagggcatcacctgcatggtggacttactg
gataagtgtgacatcacctgccaggccgaggtttggagcatgtttacagcaatcctgaag
aaaagtatacggaatctccaggcctgcacagaagtggggctcgtggaacaagtgctcaag
aggattgatagagctgacaacatgattgcagatctcttagtggacatgctgggtgtgttg
gctagctataacctgacagttcgagagctgaagttattcttcagcaagctgcaaggagaa
aaagggagatggccaccacatgctggaaagttattgtctgtgttaaaacacatgcctcag
aagtatggacctgatgccttcttcaactttccaggaaaaagtgctgcagctattgcctta
cctcctatagccaagtggccataccagaatggatttactttccacacttggctaagaatg
gatcctgtaaataatattaatgtggataaggataagccttatttatattgttttcgaaca
aacaaaggacttggttattctgctcactttgttggaggctgcttgattgtaacgtccata
aaatcaaagggaaaaggtttccagcactgtgtgaaatttgatttcaagccacaaaagtgg
tacatggtgactatagtgcacatctataaccgctggaagaacagcgaactccggtgttac
gtgaacggggagctggcatcttatggggaaataacatggtttgtcaacaccagtgataca
tttgacaaatgtttcctgggttcttcagaaacagcagatgccaatcgagtgttttgtggg
cagatgacatctgtttacctttttagtgaggctctcaatgctgctcagatctttgccatt
tatcagcttggcctgggatataagggaacgttcaagttcaaggcagaaagtgatctcttc
ctcgatgagcatcacaaattgttgctatatgatggcaaactctccagtgctattgctttt
atgtacaatccaagggctacagatgcacagctgtgtctagagtcatcccctaaggataac
ccttctatttttgttcattcaccacatgccctcatgctgcaggatgtgaaagcggtctta
acgcactcaatccaaagtgccctgcactccattggaggagtgcaggtgcttttccctctc
tttgcacagttggattataggcaatattcctcagaccacattgacacaactgtttgttct
actttactggcattcatcatggagttgttgaagaactctattgctatgcaagagcagatg
ctttcctgtaaaggcttccttgtgataggatacagcctggaaaagtcttccaaagcccac
atttccagagctgtactagaactttgccttgccttctcgaaatacctgagcagcttacac
aatggggtgcccttgctgaagcagctgtgtgatcatgttctcctgaatcctgcaatatgg
attcatatcccagcacaggttcagctgaccctgtacacttacctgtctacggagttcatt
gccactgttaacatatatggagcaatccggcgggttgggacagtgcttttggtcatgcac
accctcaagtattattactgggtggtgaaccctcaggatcgcagtggaataactcccaag
ggcatagatggtccacgtcctactcaaaaagagattttatccctgcgagcatatttgttg
atgttcattaaacagcttgtgatgaaggactatggaataaaagaagatgaattgcaggct
atcctcaattacctgctcactattcatgaggatgacaatctaatggatgtcttgcagttg
ctggttgctctgatgtcggagcatcctggttctatgatccctgcatttgatcagaggaat
ggattacaggtggtctacaagcttttagcatcacaaagtgaaggcatcagggtgcaagct
ctgaaagtgatgggatatttcttaaagcatcttgctccaaagagaaaagctgaagtcatg
cttggacacggattgttctctttgttggctgagaggctgatgcttcagacaagcttattc
accatgaccacatacaatgtcctgtttgagattctgactgaacagatttgcactcaagta
atacataaacaacatcctgacccagattcaacagtgaagatacaaaatcctcagattttg
aaggttattgcagtcctgatccgtaattccccacagtgtccagaaactctggagattcgg
cgagccttcctctcggatatgattaaactttttaataacagcagagaaaacaggaggagt
ttgttgcagtgctctgtctggcaggagtggatgctttccctttgttgttttaatccaaag
acttctgaggagcagaagataactgagatggtgtacaccatatttcggattttgctgtac
catgcaataaaatatgagtggggtggctggcgtgtgtgggtggacacactgtcaatcaca
cattcaaaggtaacttttgaaatgcacaaagagagtctttctcaaatgtacaaggagtac
caagggaaaggaggtgaagggagtggagtacattctttgactccaattagaacaatctct
gggattagcaaagaaactgaaaccaagggaaagcaacaatctttggagttaaaagaagat
gctcctgctccttcctgcgttactgatggagatacagagtgcagaactgaaaaaaaagag
acagaaaactcatcagatggtggccaacaaactcattcagggtctaatcataaggagcaa
tcagagggggaggatagggatactacgcaggatttaaaagcagtgtcttgtgtggagttt
tctccagaaccagaaacagtgaagcccagtgtctcagaaatcagtagtggaatagctgaa
gcaattgaagattctagcaaagctgatgagcttgtggaagaaacagttgctgtcgctgct
gcttctttagccatgcaaactcctgtggaacgagaaactcgcacaagtccagaaaaactg
gaaaaatcagccgtagaggtggaagatgaagatgactttgttgatttgaaggatgaaagt
agtttgcctttaccttcagaagaatttgcagaaaggaacaaggaatgtggctctaatgaa
agcaaagtgacaaagcaggaagaaacaacagagaagcaacctgaatctgtgcgtttgaaa
tctgaggatactgaaggtgtggataagaagaaacaagaactgactttgccagagacagtg
agttctgccatttctgaaaccagaacgactgtggaaaatgcaaatgcacgtgtggcagag
cctgctggagcctctgacaaaagaattgccaagcttgatgtttctagtgttgcatcagat
acagaaagactggagctgaaagctaacacatgtctagaagcacctctgccccccagatcc
atacctgagagatacctcctaatggatgctcttcattctgcaccattcttccttaaagga
ggaaaaccactgtcaacagcaacatattctccccctgtgccctcaaggcagcaggtttcc
tcgggacaagagctggctgctccatcagatgggcagaggagagacacgaggtcaactgtg
ttccgtattcctgagttcaagtggtcactgatgcaccagcgcctgctcacagacctgctc
ttctccatagaaacagatattcagatgtggagaagccattctacaaaaactgtgatggac
tttgtgaatagcagtgacaatgtggtgtttgtgcacaacacgatccacctcatctctcaa
gtgatggacaacatgatcatggcctgtggtggtatcttgccattgctttctgctgccaca
tctgctactcatgaattggagaatattgagccaactcaaggactttcagtagaagcatct
ttaacatttctccagaggttaatcaaccttgtggatgtgttaatttttgcaagctctctt
ggtttcactgaaattgagtctgagaaaaatatgtcatctggaggaattctgcgacaatgt
cttcgtctggtatgtgcagtagcagtaagaaattgcttggagtgtcagcagcatgcacag
atgaaacctattggtgacactgggaagaaccaaaaagcagtgcaaggctttataggatca
ggaaagtctgcagcaaagagtccagtggacattgtgacaggtggcatttctccaatacgg
gaccatgacagacttctgcaggatatggatattaatcgcctccgagcagtcgtgttcaga
gatatagaggatagtaaacaggctcagtttttggctttggctgttgtatattttatttct
gtgctcatggtttcgaaatacagagatatactggaacccccgaatgaaagacgaccacca
aaccaaagccagtcactcaaggaatcagaaaatgaacgtaatgagactcctgctgcagtt
atggaaaacccatctgctgcttttggtgcttcagcctccactgaagattcagaaggtaca
gcatctctgcaaagaagggattctggtcttggggaggaagcagctccagcacaaaccaac
cgttcaggaagtgctgctgaagcaggacctctgagtgtcagtgcaggcccagatgcagtc
agtgaagtcctgtgcacactctcattagaagtcaataagtctcaggagggcggaagtgag
acaggaactgaagagagtaaatctgtggcttctgtgccagctgcaaaaaatgtcaatgtg
aaggacatcttgagaagcttggtgagcacaccagctgatgggactgccgtggatgctgct
cttctgccaccaaccttcctcggagttcttggcaacggagctgctgagcagcctgtgcag
ttccattcctttgacaggagtgttgttgtaccaacgaagaaatcaaacatttcctctaca
gctgctattggtgttcctacaaacgctgtcagtgtggtttcttctttagattcagcccaa
gaaccagatttgtcaggagaatctcctggaaggggatcatctaattcaaaattgccatct
gttcctacagtttcttcagtgcctgaggattctgcctccaatatgagtattacagacagg
cttgagcatgctttggaaaaagctgccccacttctgagagagatttttgtggattttgct
ccctttctttctcgaactcttttgggcagccatgggcaggagttgctgatagaaggtaca
agtcttgtgtgcatgaaatcgagcagttcagttgtggagctggtgatgctcctttgctct
caggagtggcaaaactctatacagaagaatgctggccttgcctttattgagcttgtcaat
gaaggaaggttgctgagtcaaaccatgaaggagcatctggtacgagtggctaatgaagca
gaatttatcctgagcagacagagggcagaggatattaaccgccatgctgaatttgagtca
ctgtgtgcccagtactctgcagacaaacgggaagaagaaaaaatgtgtcatcatttgatc
acagcagcgaagtaccgggaccaggtgactgcaacacaactaatacagaaaattgtcaac
attctgacagacaagcatggagcctggggaagctctgcaccaagtcgtcctcgtgagttc
tggcgcctcgactactgggaagatgacttgcggcgccggcgacgatttgtgcgtaacccc
cttggatcgacacatcctgaagcgacactcagggcagccggagagcatgctcctgatgag
gatatacttgtcaaaggaaagcagtccatcaagagtcaagttttaggaaaccagaactca
gaaagcgagattctcttggaaggggatgacgatatcatgtcattcatggaggaaagagaa
gtggagaacttgacaggtccggtggccctcagcacaccagctcagcttgtggcacccaaa
aatctttccatcactgtttctgagctctactttgaggtggatgaagaagatcctagtttt
aagaaaatcgacccaaagattctggcatatacagaagggctccatggaaaatggctcttc
tcagagattcgatctattttttcccgacgttaccttttgcaaaatacagcactggagata
ttcatggcaaatagagtgggagtcatgttcaacttccctgaccaagcaacagtgaagaaa
gtggttaactgtctacctcgggttggtattggtaccatctttggactaccccagaccaga
cgcatttctttggctagtccacgacagatcttcaaagcttccaatatgacccagcgatgg
cagcaccgagagatttccaactttgaatacctgatgtttctaaacactatagcaggtcga
acttacaatgatttgaatcagtaccccatcttcccttgggttatcaccaactatgagtca
gaggagttggaccttacacttcctagcaacttcagggatttgtcaaagcccattggagct
ttgaacccaaagagagcagcattctttgctgagagatatgagtcgtgggaagacgatcag
gtcccaaaatttcactacggcacccattattcaacagcaagttttgcactcacgtggttg
ttaaggattgagcccttcacaacactcttcctaaatctacaaggtgggaagtttgatcat
gcagataggactttttcgtctatttcaagagcgtggcgcaacagtcagcgtgacacttct
gacatcaaggaattgattcctgagttttattacctcccagagatatttgtcaacagcaac
aattacaatctgggagtgatggatgatggaacagtggtgtctgatgttgaacttccaccg
tgggccaaaaccccagaagaatttgttcgcataaacaggctggcgttggaaagtgagttt
gtttcctgccagcttcaccagtggattgatctgatttttggctacaaacaacaagggcca
gaggctgttaggtccctcaatgtattctactatttgacttatgaaggagctgttaattta
agttcaataacggattctgtactgagagaggctgtggaagctcaaataagaagttttgga
cagaccccttcccaactactcatagaaccacatcctccacgaagttctgccatgcaggtg
tatctcctcctgcagagccccttgatgttcacagagcaagcccagcaggacgttatcatg
gtcctgaagtttccatccaactccccggtcactcacgtggctgccaacacccaacccggc
ctggccactcctgctgtgatcacggtcactgcaaacaggctctttgctgtgaacaagtgg
cacagcctccctgctcatcaaggtgctgtacaagaccagccttaccagctgccagtggaa
atcgatcctctcatagccagcaatacaggtatgcacagaaggcaaatcactgacctttta
gaccaaagcattcaggtacattcccagtgttttgtcatcacctctgacaatcgttacatc
ttggtctgtggcttctgggacaagagtttccgtgtttattctactgactcaggtaaactg
atgcaggtagtgtttggccactgggatgttgtaacctgtgtggctcgttccgagtcctac
attggagggaattgttacatcctctcaggatcccgggatgcaaccttgctgctctggtac
tggaatggcaaaaccaacatcattggtgataacccaagaggtgattttgcaactcctcga
gctgttctgacagggcacgactatgagatcacctgtgctgccatttgtgctgagcttggc
ctggtaataagtggttcaaaagaaggaccatgtctcatacattctatgaatggagatcta
ctgaggacattagaaggtcctgaaagattacaaggtcccgaaagctgcctgagaccaaaa
cttattcaagcttccagagaaggccactgtgtcatatattatgaaaacggcctcttctgt
gtgttcagtgtgaatgggagactgcaagccactatggaaacagatgacaagataagggcc
attcagctgagtcgggatggacagtatctgctcacaggtggagacaacggagttgtcatg
gtctggcaggtgtgggacctcaagcagctctttgcttacccaggctgtgatgctggaatc
cgatccatggccctgtcctatgaccaaaggtgtataatgactggaatggcgtccgggagc
atcgtggttttctacaatgatttcaatcgctggcaccacgagtaccaaaccaggtactga
DBGET
integrated database retrieval system
