Corvus brachyrhynchos (American crow): 103622460
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Entry
103622460 CDS
T08418
Symbol
FIP1L1
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
cbrc
Corvus brachyrhynchos (American crow)
Pathway
cbrc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cbrc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103622460 (FIP1L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbrc03019
]
103622460 (FIP1L1)
Messenger RNA biogenesis [BR:
cbrc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
103622460 (FIP1L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
103622460
NCBI-ProteinID:
XP_017599786
LinkDB
All DBs
Position
Unknown
AA seq
606 aa
AA seq
DB search
MAMQLAKRRSVFSLSATQSLRRNSFYRPQMVKVDFYVTTSSVARTGVQGRRRAQGPPRAK
GSERKGRRLSQCASGERRKHSRDENEAERPEEEKSSAPPPPGSEEEAAENGVVKTKVAEA
EDDSDSDSDDDEDDVQVTIGDIKTGASQFSYGAAPVNLNIKAGGRAYGSSGAKVKGLDLD
APGSINGVPLLEVDLDSFEDKPWRKPGADLSDYFNYGFNEDTWKAYCEKQKRIRMGLEIL
PVTSTTNKITAEDKAMEVRPSAEILDGRYHLFKVQQGRTGNLEKELAVQSTKPDFTSPPA
LFKSGIPANRRISGTIDVIGQTITISRVEGRRRANENSNIQVLSERSNPEVDSFTKPPPF
FPPGAPPTHLPPPPFLPPPPTVSTAPPLIPPPGIPITVPPPGFPPPPGGPPPSLIPTIDS
GHSSGYDGRPVRAFSYGSVTFPHPAGSAPSWSSLLDTSKQWDYYARREKDRERERERSRD
RDRDRDRDRDRDRTRDRERDRDHSPSSSAFNSDEERYRYRDYAERGYDRHRTSREKEDRH
RDRRHREKEETRHKSSRSNSRRRHDSEEGDSHRRHKHKKSKRSKEGKEASGEPAPEQENT
EAAPVE
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgcagctcgcaaagaggcgttctgtcttcagcctttcagctactcaaagcctt
agaagaaacagtttttacaggccacaaatggtcaaggtggacttttacgtcaccaccagc
tcagtcgcacggacgggcgttcagggacgcaggagagcacaaggaccaccgagagcaaag
ggcagcgagaggaagggaaggcggctctcgcagtgcgcctcgggagagcggcgaaagcac
agccgcgatgaaaatgaagcagagagaccagaagaagaaaaatctagtgctccaccccca
cctggaagtgaagaggaagctgcagaaaatggcgttgtgaaaacgaaggtggcagaggct
gaggatgacagtgatagtgatagtgatgatgatgaagatgatgttcaagtcaccataggg
gatattaagacaggagcttcacagtttagttatggagcagcacctgtgaatctcaatatt
aaggcaggaggacgagcttatggatcttctggtgcaaaagttaaaggactggatctagat
gcaccagggagtattaatggtgtgccacttctggaagtagatttagattcttttgaagat
aaaccttggagaaagccaggggctgatctctcagattattttaattatggcttcaatgaa
gatacctggaaagcttactgtgaaaaacaaaagagaatacgaatgggtcttgaaattttg
ccagttacctcaaccacaaataaaattacggctgaagacaaagctatggaagtaagacca
agtgcagagattctcgatggcagataccatctttttaaggtacagcagggcagaactgga
aatttggagaaagagttggctgtgcagtcgaccaaacctgatttcacatctcctcctgcc
ttattcaaatcaggaattccagcaaacaggcggatatctggcacaatagatgtgattgga
cagaccatcactatcagcagggtggaaggacgacggcgtgctaatgaaaacagcaacata
caggttctttcagaacgctctaatcctgaagtagacagttttaccaagccacctccattt
ttccctccaggagctccacctactcaccttccaccacctcctttcctcccaccccctcca
actgtcagtactgctccacctctgattcccccaccaggtataccaataacagtgccacca
ccaggttttccaccaccacctggcggtcctccaccttccctcatacccacaatagacagt
ggacattcttctggctatgatggtcgtcctgttcgtgcattttcatatggcagtgtcacc
tttccacaccctgcgggttctgcaccctcgtggtctagtcttctggacaccagcaaacag
tgggattactatgcacgaagagagaaggatagggaacgtgagagagagagatcccgagat
cgggatcgcgaccgggatcgagacagagatcgagaccgtaccagagacagggaaagggac
cgagatcacagtccgtcttcaagtgcgttcaacagtgatgaagaacgctacagatacaga
gactatgcagagaggggctacgaccgccataggacaagtagagagaaggaagacagacac
agagacaggagacacagagagaaagaagagactcgacacaagtcatctcgaagtaacagc
agacgtcgtcacgacagtgaagaaggggatagccacagaaggcacaaacacaagaagtcc
aaaagaagcaaagaaggaaaagaagccagtggtgaacctgctcctgaacaggaaaacact
gaagctgcccctgtggaatag
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