KEGG   Corvus brachyrhynchos (American crow): 103622479
Entry
103622479         CDS       T08418                                 
Name
(RefSeq) LOW QUALITY PROTEIN: general transcription factor IIE subunit 1-like
  KO
K03136  transcription initiation factor TFIIE subunit alpha
Organism
cbrc  Corvus brachyrhynchos (American crow)
Pathway
cbrc03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:cbrc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    103622479
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cbrc03021]
    103622479
Transcription machinery [BR:cbrc03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIE
     103622479
 Prokaryotic type
  Archaeal type
    TFE
     103622479
SSDB
Motif
Pfam: TFIIE_alpha TFIIE-A_C Zn_Ribbon_TF Cas12f1-like_TNB Zn_ribbon_PaaD DUF7501
Other DBs
NCBI-GeneID: 103622479
NCBI-ProteinID: XP_008639669
LinkDB
Position
Unknown
AA seq 421 aa
MEEQKVPSEVPAALKRLAKYIVRGFYGVECSLALDVLIRYPCVKEDDLLQLLKYEHKQLR
AVLNTLKADKLVKLRMRVETGPNGKSTRHNYYYINYKVLVDVVKYKLDHVRRKIEADERD
STTRSSFKCPSCSSSYTDLEVNQLFDAFTETFRCTYCNTEVEEDGSAFPKHDARTLLAKF
NEQIEPVFVLLRETEDIVLPYDLLEPQPTEIPELSESFDLKLGSSVLESCSRPEKWAHRS
SSFGLTYTQNLTIDVQDSKHKKKKREKATEKQPIWLSQSTVEGAATATNNTAGVNASEET
EESVKETVTDNEIIKTLLIHESKSSSSRDQAPVVKSKLHGSCSDNSESEXXXXXXXXXXX
XXXNFEQEEEQETLGPILMVAGQPCSYGEVSENPQLVSLMTDEERDAYIKVGQEMFQSVF
E
NT seq 1266 nt   +upstreamnt  +downstreamnt
atggaggagcaaaaagtccccagtgaggtgccagcagccctaaagcgcctggccaaatac
atagtgcgtggtttctatggtgtggagtgttccctggccctggatgtactgatccgctac
ccctgcgtgaaagaggatgacttgttacagctgctcaagtacgagcataagcaactgcgc
gctgtcctcaacacgctcaaggcagacaagctggtgaagctgcggatgcgagtcgaaaca
gggcctaacgggaagagcacgaggcacaattactattacattaattacaaggtactggtg
gatgtggtaaaatacaaactggatcatgtacgtcggaaaatagaagcagatgagcgggat
tcaactaccagatcctcttttaagtgtccgtcttgctctagctcttacacggaccttgaa
gtcaatcagctctttgatgcatttacagagaccttccgctgcacttactgcaacactgaa
gtagaggaagatggctcagcatttccaaagcatgatgctcgaaccttgctggcgaagttc
aacgagcagatcgagcctgtctttgtgctgctgcgtgagactgaagatattgtgctgccc
tatgacctgctggagcctcagccaacagaaataccagaattatcagaaagctttgatctg
aagctgggctcaagtgtgctggaatcctgcagccgccctgaaaaatgggcacacagaagt
tcctcttttggccttacgtacacccaaaacttaactattgatgtccaagactcaaagcac
aagaagaaaaaaagagaaaaagcaactgaaaagcaacctatctggttgtcacagagcacc
gtggaaggagcagcaacagccaccaacaataccgctggagtaaatgcttctgaagaaact
gaagaaagtgttaaagaaactgtcactgataatgaaatcatcaagactcttctgatccat
gaatccaagtcatcatctagcagagaccaggctcctgttgtcaaaagcaaactacatgga
tcatgcagtgataatagtgagtccgaanngnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnaactttgagcaagaggaggaacaagaaactctgggtcctattttaatggta
gctggtcagccctgttcatatggtgaagtcagtgaaaatccacagcttgtgtctctcatg
acagatgaagagagagacgcttatataaaagtaggacaagaaatgttccagtctgtcttt
gagtaa

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