Corvus brachyrhynchos (American crow): 103622520
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Entry
103622520 CDS
T08418
Symbol
RFC1
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
cbrc
Corvus brachyrhynchos (American crow)
Pathway
cbrc03030
DNA replication
cbrc03410
Base excision repair
cbrc03420
Nucleotide excision repair
cbrc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cbrc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
103622520 (RFC1)
03410 Base excision repair
103622520 (RFC1)
03420 Nucleotide excision repair
103622520 (RFC1)
03430 Mismatch repair
103622520 (RFC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cbrc03032
]
103622520 (RFC1)
03400 DNA repair and recombination proteins [BR:
cbrc03400
]
103622520 (RFC1)
DNA replication proteins [BR:
cbrc03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
103622520 (RFC1)
DNA repair and recombination proteins [BR:
cbrc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
103622520 (RFC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
AAA_22
AAA_14
PTCB-BRCT
Rad17
BRCT_2
AAA_30
AAA_5
RuvB_N
AAA_7
AAA_17
RNA_helicase
AAA_33
AAA_16
AAA_18
nSTAND3
TIP49
AAA_19
NTPase_1
Motif
Other DBs
NCBI-GeneID:
103622520
NCBI-ProteinID:
XP_017599779
LinkDB
All DBs
Position
Unknown
AA seq
1087 aa
AA seq
DB search
MAANPGSSDNNQDIRKFFGVVPPGKRQECESVKKSERIKNGEGPSSGKKREKEAKVNNSP
SEDDSKQKRTKKKRRIIYDSDEEDDFVNRRISLKPKENGTSAVGCPGTNIVKKGEVKPQA
KSKPLSPVKQTPTSALDYFGTTSVQRSEKKLVASKRKEPSQSRDSTLDDEAIARQLQLEE
DSELERQLHEDEEFARTLAMLDETPQKKKARKDTEGEQTVLSISSSPNRTAGYKQSERVK
ATDSAGAAKNYSAKRQNKSEQLKEIAEKERGAQNSLSREKAALGKEERTPPKKEKVSPKK
TESISPEDSEKKRNYQAYRSFLNREGPKALGSKEIPQGAENCLEGLTFVITGVLECIERD
EAKSLIERYGGKVTGNVSKKTNYLVMGRDCGQSKREKASTLGTKVIDEDGLFDLIRTMPG
KKSKYELAAETEAEKVESRPKKTPQKTEAGKRNFSPYKREANNKYKSTPEKGDTARSVKR
ETTAIRKLTDFKHHTVEEKEAPKPKGNLVSEVNEDGAEKLLWVDKYKPVSLKAIIGQQGE
QSCANKLLRWLRNWHKNTLEDGQVKPSKTGSKDDGTSFKAALLSGPPGVGKTTTAALVCK
ELGYSYVELNASDTRSKNSLKEVVAESLNNTSIKDFYSGASSSVSGKHVLIMDEVDGMAG
NEDRGGIQELIALIRHTKIPIICMCNDRNHPKIRSLVHYCLDLRFQRPRLEQIKGAMMSI
AFKEGLKIPPPAMQEIILAANHDIRQVLHNLNMWCARDKSLTYDEAKTDASRAKKDIKLG
PFDVVRKVFATGEEAVRMSLIDKSDLFFHDYSLAPLFVQENYVHVKPAAAGGNLKKHLVL
LSRAADSICDGDIVDKQIRSKQNWNLLPTQAIYASVLPGELMRGYMSQFPVFPIWLGKFS
STGKHDRIIQELAMHMSLRTQTCKRTVNMEYLSYLRDALVQPLKDFGADGVQQAITFMDS
YCLMKEDVENIMEISMWGGKPSPFSKLDSKVKAALTRAYNKEAHLTPYSLSSVKASKRQS
GSAVTLDLSEDLNVEEMQSDEDEQDTVDSDAMIKQKKVKSSKLTKREKNEETTKKEGKRK
EKTRHLE
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaaccctggcagtagtgataacaaccaggatatccggaaattctttggtgtt
gtaccacctggaaagcgacaagaatgtgagtctgtgaaaaagagtgaaagaattaaaaat
ggtgaaggaccctcaagtgggaagaaaagggaaaaggaggctaaggtgaataattcaccc
agtgaagacgattccaaacaaaagcggacaaaaaagaagagaagaataatctatgattca
gatgaagaggatgattttgtcaatagaagaatttccctgaaaccgaaggagaatgggaca
tcagccgttggctgtccaggaacaaatattgtcaaaaaaggagaggtcaaaccacaagct
aaaagcaagcccctgtctccagtgaaacagactcccacctctgcacttgattactttggg
acaacgagtgtccaacggtcagaaaagaaactggtagcaagtaaaaggaaagagccttca
caaagcagagatagcacactagatgatgaggccattgctaggcaactgcagcttgaagaa
gattcagagctggagagacagctgcatgaagatgaagaatttgctagaactctggccatg
ttggatgaaacaccgcagaagaaaaaggctcggaaagatacagaaggagagcaaacagta
ctgagcatcagtagcagccctaataggacagcaggatataagcagtcagaaagagtgaag
gcaacagactcagctggtgcagccaagaattattctgcaaagcgtcaaaataaatctgaa
cagttgaaagagattgctgaaaaagaaagaggtgctcaaaattcactatctagagaaaaa
gcggctttggggaaagaagagaggacaccaccaaagaaggagaaagtctctcccaagaag
actgagtctataagtcccgaggactctgaaaagaagcgaaactaccaagcttaccgaagc
ttccttaatcgtgagggtccgaaagcactgggttccaaagagatacctcagggagctgaa
aactgcttggaaggcctgacatttgtaattacgggtgttctggagtgcattgaaagagat
gaggccaagtctctgattgaacgttacggaggcaaagtaactggcaatgtcagcaagaag
acaaattacctggtgatggggcgagactgcggccagtccaaacgtgagaaggcatcaact
ttaggtacaaaagttattgatgaggatggtctgtttgatcttattcgaactatgccaggc
aaaaagtccaaatatgagctggcagctgaaacagaggcagagaaagtggagtcaagacct
aaaaagacacctcagaaaactgaagctggaaaaagaaattttagcccctataaaagggaa
gctaataataagtacaagtctactcctgaaaaaggagatactgccagatctgtcaagaga
gaaaccactgctattcgaaagcttacggactttaaacatcacacagtagaggagaaagaa
gccccaaaacctaaggggaacttggtttctgaggttaatgaagatggtgcagagaaattg
ttatgggtagataaatacaagcctgtatctcttaaggcaattattggacagcagggtgag
caaagctgtgccaataaactgctccgatggctcagaaattggcacaagaataccttggaa
gatggacaagtaaaacccagtaaaactggaagcaaagatgatgggacaagttttaaagca
gctttactttctggtccacctggagttggtaaaactactacagctgctttggtttgtaag
gaactggggtatagctacgtggagctgaatgccagtgacactcgcagcaagaacagtcta
aaggaagtagttgctgaatcacttaacaacaccagcatcaaagacttctattctggtgca
tcctcatcagttagcgggaaacatgtattgatcatggatgaagtggatggtatggcaggc
aatgaagacagaggagggattcaggagctgattgctttgatccgacacacgaagataccc
atcatttgtatgtgcaatgatcgcaaccatcctaaaatccgctccttggtccactactgc
ttggatcttcgttttcagagacctcgtctagaacagatcaagggtgccatgatgtctatt
gcatttaaagaaggtttaaaaattcccccacctgctatgcaagagataatcctggcagca
aaccacgacatcagacaggttttacataatcttaatatgtggtgtgcaagagataaatca
ttgacttatgatgaggctaaaacagatgccagcagagccaaaaaggacatcaaattgggc
cctttcgatgttgtccggaaggtttttgctactggagaggaggctgttcgtatgtctctt
atagacaaatcagatcttttcttccatgattattcgctagctcctctctttgtacaagag
aactacgtgcatgtgaaaccggctgctgctggaggtaatttaaaaaagcacttggtgctc
ttgagtagagcagctgatagtatatgtgatggtgatatagtggacaagcagattcgtagc
aagcagaactggaatcttcttccaacacaggctatttatgccagcgttctccccggggag
ctgatgagaggttacatgtcccagtttcctgtctttcccatctggctggggaaattttca
tccacaggcaaacatgatcgtatcattcaagaactggcaatgcacatgagtctcagaact
cagacatgcaagaggacagtaaatatggaatatttgtcatatttgcgggatgcacttgtc
cagcccttgaaagactttggagcagatggtgtacaacaagctataacatttatggactcc
tactgcttgatgaaagaagatgttgaaaatatcatggaaataagcatgtggggaggcaaa
cccagtcctttttcaaagctggattccaaggtcaaagcagctttgacacgtgcctacaac
aaagaggcacatctgactccatattcacttagttcagtcaaggcatctaaaaggcagtcg
ggatctgcagtgactttagatctgagcgaagacttgaatgtggaagagatgcagtctgat
gaggatgagcaagatactgttgacagtgatgcaatgattaagcaaaaaaaggtgaagtcc
tccaagctgacaaaaagagagaaaaatgaagaaacaacaaaaaaagaagggaaaagaaaa
gagaaaacaagacatttagagtaa
DBGET
integrated database retrieval system
