Corvus brachyrhynchos (American crow): 103622708
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Entry
103622708 CDS
T08418
Symbol
TRERF1
Name
(RefSeq) transcriptional-regulating factor 1 isoform X1
KO
K26583
transcriptional-regulating factor 1
Organism
cbrc
Corvus brachyrhynchos (American crow)
Brite
KEGG Orthology (KO) [BR:
cbrc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cbrc03036
]
103622708 (TRERF1)
Chromosome and associated proteins [BR:
cbrc03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
MiDAC complex
103622708 (TRERF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2_6
ELM2
zf-C2H2_4
zf-C2H2
Myb_DNA-binding
zf-met
Myb_DNA-bind_7
Zn_SUZ12
Myb_DNA-bind_6
zf-C2H2_2
Motif
Other DBs
NCBI-GeneID:
103622708
NCBI-ProteinID:
XP_017600289
LinkDB
All DBs
Position
Unknown
AA seq
1165 aa
AA seq
DB search
MGDQQLYKTNHTANNSENLYYEQHQMNSLPSLNHSYGTSVMDAPQASPLSPPFPQDSRDS
IALPVGSKSLGSMDTSRQTSWTHSGSGNHVPARNNLNNQSAMWSPLGQGESHDGYQYSYP
QPSENRSQKITSGVLHKLDSFTQVFANQNLRIQVNNMAQVLHTESSMVDNSGDSALRQLL
SQKPVVEQQPVTSTVQRYQPVPQQTHQNFASTQQKQQMQVMQHQQLYYDYQQHLSQMQMH
SALQQGQAHVPQMQSQQLLPQQMQHLQQPQYYAQPQQGHQRLSIQEIQQQPQPPARQQRQ
CPVQLAQYYQTQPVMQQLQQQQQQMQLPLPPYHREPDPKTMHEPHQYSQDPSHPVQLIQL
GAVPQYCFQDPHEQYRHLYPQSLLQQQQDQQKQYLSESRVPSLNSHLGLTPPETAEDPTR
QEINSIGNAVPHRTLLPPLGVHLNNKSSQQDSPSTTWPQQVQLSDGRLQPLSPEQSGQNR
ETLPERADAKNKLMCSICLKEFKSLPALNGHMRSHGGVRASPNFKQDEGEKPPQQPLPKE
VDGLAPIVMPVSVPVKLLSPEPSTQPSASTATVTDKPANSVSDDEMPVLVKMTYSPPCSP
KVANPCSSSETSKKPHPSAVKLEENFKPLQDKKKYRHRPEPLFIPPPSFNLSMSHSGATL
YQSQLRSPRVLGDHLLDRTHELPPYTPPPMLSPVRQGSGLFSSVITSHSTSHAQLPLTPL
TPTPRVLLCRSNSIDGNVIPVTPGPGEQTVEPRINIGSRFQADIPELQDRLLMEKDVHKA
TLVWKPWPELENKVFQQRVEDLLNMSCSSVLPGGGTNSEYALHSLFEAKGDIMVALEKLL
LRKPVRLKCHPLANYHYAGSDKWTHQERRLFKEALSTYSKDFIFVQRMVKSKTVAQCVEY
YYTWKKILRLGRKHRTRLEKKRDECLTSGEEEVLEEDEEIEEDRKEEREMQKSPDPPAIS
LVGPIDLPAVQGLSLSSSSFICEMPNCGAVFSSRQALNGHARIHGGTNQVTKTRCTIPGT
KQKSGTQSGYCSIKSSPAHSTTSGETDPTTIFPCKECGKVFFKIKSRNAHMKTHRQQEEQ
QRQKAQKAAVAAEMAATIARTTGPAGHSLIPLDHMSLVKHVENVGDIDDDVVPDLGDVME
ENEVMDADLLLDDEDPDLLQDDAEL
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atgggggaccagcaattgtataaaactaatcatactgccaacaacagtgagaacttgtac
tacgaacaacaccaaatgaactcccttccatctctaaatcatagctatgggacgtctgtt
atggatgctccccaggcatcccccctctcccctccatttccccaagattcaagggacagt
atagctttgcctgtaggttcaaaaagtcttgggtcaatggatacatctagacaaaccagt
tggacacattctggctcaggaaaccatgtcccagcgaggaacaatttgaataatcaaagc
gcaatgtggagccccctcgggcagggggagtcccatgacggataccaatattcttacccc
caacccagtgaaaaccgatcgcaaaaaattaccagtggggtcctgcacaaattggactcc
tttacacaagtatttgctaaccaaaatctgagaattcaagtcaacaacatggctcaggtt
ctgcacaccgagtcttcgatggtggataattccggtgacagtgcgctcaggcagctgctg
tcccagaagccggtggttgagcaacagcctgtaacttccaccgtacaaagataccaacca
gtgccacagcaaacacaccagaattttgcaagcacacagcaaaaacaacaaatgcaagtc
atgcagcaccaacagttgtactacgactaccagcagcacttatcacagatgcagatgcat
tctgcgctccagcagggacaggcgcacgttccgcaaatgcagtcccagcagctcctaccg
caacagatgcagcacttgcagcagcctcagtactacgctcagccccagcagggacaccag
cggctctcgatccaggagatccagcagcagccgcagccgccagctcggcagcagcggcag
tgtccagtgcagctcgctcagtattaccaaacacaacctgtcatgcagcagttacagcag
cagcagcagcagatgcaattgccgcttcctccgtatcacagggaacccgatccaaagact
atgcatgaaccacaccagtactctcaggatcccagtcatcctgtgcagcttatccagttg
ggagcagtgcctcagtattgcttccaagatccccacgaacagtacaggcacttgtacccc
cagagtttactgcagcagcagcaagatcagcagaagcaatacctgagtgagagcagagtg
ccatccctgaactcccaccttggcctgactccaccagagaccgccgaggatcccacacgg
caggagattaattccatagggaatgctgtccctcatcgaactcttttgccgcccttggga
gttcatctgaacaacaaaagctctcagcaagactctcccagcaccacatggcctcagcag
gtgcaactgtcagatggcagactgcagccactgtccccagaacaaagtggccagaacaga
gaaacacttcctgagagagctgatgcgaagaacaagctaatgtgttcaatatgcttgaag
gaatttaagagtttgcctgctctaaatggtcacatgaggtcacacggaggagtaagagca
tctcctaacttcaaacaggatgaaggagagaaaccaccacagcagccgctgcctaaagag
gtggatggcctcgcgcccatcgtcatgccagtgtctgtccctgtaaagcttctgtcacct
gagcccagcacgcagccctctgccagcacggccacagtcacagacaagcctgccaactct
gtgtcagatgacgagatgcccgttctcgtgaagatgacttactctccaccgtgcagtcca
aaagtggccaacccctgctcatcctctgaaactagcaaaaagcctcatccaagtgctgta
aaattggaagaaaacttcaaaccgttgcaggacaagaagaagtatcggcacagaccagaa
cctctcttcatacctcctccttccttcaacctcagcatgtcccactctggtgccactctg
taccagagtcagcttcgctctccccgtgttctgggcgatcacctgctggaccggacacat
gagctgcccccctacactccaccaccgatgctcagtcccgtccggcaagggtctggtctc
ttcagcagtgttatcacttctcacagcacatcacatgctcagctgcctcttactccattg
actcccactccacgggtgctcctgtgtcggtctaatagtattgatggaaatgtcattcca
gtgacgcctggacctggagaacagactgttgaaccgcgaatcaatattgggtccaggttc
caggctgacattcctgagctgcaggacagattgttaatggagaaagatgtgcacaaggct
actttggtttggaaaccgtggccagaactggagaacaaagtcttccaacaaagagtggaa
gaccttttaaatatgagctgttccagtgtgttacctggtggaggaactaactcagaatac
gctttgcactctctctttgaagcaaaaggagatattatggttgctcttgaaaagctgctg
ttgagaaagccagtgagattgaagtgtcatcctttggcaaattaccactacgccggctct
gacaaatggacacatcaagaaaggaggctgttcaaagaggcattgtccacctacagcaaa
gatttcatatttgtacagagaatggttaaatctaagacagttgcacagtgtgtggaatac
tactatacgtggaagaaaatcttgcgtttgggacggaaacacagaacgcgcttagagaag
aaaagagatgagtgcttgacaagtggagaagaggaagtgttagaggaagatgaggagatc
gaagaagacagaaaggaagaaagggaaatgcagaagtcacctgacccaccagctatctct
cttgttggacctatcgatctgcctgctgttcagggtctttcactttcttcgtcctccttc
atctgtgaaatgccaaactgtggtgctgtgttcagttcccgacaagcgctgaatggccac
gctcgcattcacggaggtacgaaccaggtgacgaaaacacgctgcaccattcccggcact
aagcagaaatctggtacgcagagcggatactgctccatcaagagctcacctgcccacagc
acaacaagtggcgagactgacccaacaacaatttttccttgcaaggagtgtggcaaggtc
ttttttaaaatcaaaagccgcaatgctcatatgaagactcacagacaacaagaagaacag
caaaggcagaaggctcagaaagctgctgtggcagcagaaatggcagccactattgcaaga
actactgggccagctgggcatagtttgatccccctggatcacatgagtctggttaaacat
gtggaaaatgttggtgacattgatgatgatgttgttccggatctgggtgatgtcatggaa
gagaatgaagttatggatgctgacctcttactggatgatgaagatccagatctactgcag
gatgatgctgagttgtaa
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integrated database retrieval system
