Corvus brachyrhynchos (American crow): 103623230
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Entry
103623230 CDS
T08418
Symbol
SNAPC4
Name
(RefSeq) snRNA-activating protein complex subunit 4 isoform X1
KO
K09453
snRNA-activating protein complex subunit 4
Organism
cbrc
Corvus brachyrhynchos (American crow)
Brite
KEGG Orthology (KO) [BR:
cbrc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cbrc03000
]
103623230 (SNAPC4)
03021 Transcription machinery [BR:
cbrc03021
]
103623230 (SNAPC4)
Transcription factors [BR:
cbrc03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
103623230 (SNAPC4)
Transcription machinery [BR:
cbrc03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
snRNA-activating protein complex (SNAPc)
103623230 (SNAPC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
HTH_CHD1_Hrp3
SLIDE
SANT_DAMP1_like
Myb_DNA-binding_2
Motif
Other DBs
NCBI-GeneID:
103623230
NCBI-ProteinID:
XP_017601005
LinkDB
All DBs
Position
Unknown
AA seq
1475 aa
AA seq
DB search
MEVEREEDSSDDDDDDIESLPQDPETCLQMNYVYQEIIKEKIEEVELLIAQNKEQQKEIM
CELDGSKTAKAGDGRNLPANVFLGHFMKPYFKDKTTGIGPPSNEDAKEKAAQGIKSFEQL
HSAKWKTREKTLLQKSVVSDRLQRLLQPKLLKMSYWNQKLEKVKTETEKQTLEKQIKGLE
QEIESINQLPESDLIGNRFDEHDWDKISNIHFDGQRSSEELRKFWQNWEHPSINKKEWTE
EEIERLKQIAAKHNYLDWQTIAQELGTNRTPFQCLQKYQIYNKDLKRKEWTKDEDQMLLE
LVQEMRVGSHIPYKKIAYYMEGRDSAQLIYRWTKNVDPSLKKGPWTAEEDAMLMAAVTKY
GAKDWYKIRTEVPGRSDAQCRDRYLKALHWDVKKGKWSLEEEEQLIELVQKHGLGHWSKI
ASELPHRTGSQCLSKWKLMIGAKKKRSGATKRRHAEESSSPSESSSEEDMELNLTDSSEE
EEVTSTARKKEYAVPSIDLWIPTGTDMQEATGERYQIQSLLSAARAGAGTSCSDIPRAAR
DGDRAADKSSELYTLLKGIAQPHSTDVVVKNAAEVMARASQSGKQVLQVSLEDVRTILKN
NTSFQRRLMLRPPGSLLAKPPGVGAAVGQDVQGLQELPKRAQRWAREHWKRLSLDRKLLM
AVTPWVGNVLLPRTLQAGRMAFHQTKAAAIQEKVKSVSLTSTPLFALLIQLFQIDTKGCM
KIIKERKLRQLELLKANARSPQQASQNTETSSGNSSQPCSQRNSQRGIPRNTVRRPLALR
AREPSTGALESCAAVQGQGRKAKTVLELLREKRLRESQAKKAMQRTVLVAPQVLVSGPLI
IQHPPQQIIPSAQAASKPAAAAGTDSQVRGSPLPTRTSSAGSASALVPENHSSAVPETGE
SPGCSQGTDLQSKKELKEQALESSPEGRGFPGKDPSAAEKAPEQRGCNGQVTASSSASAV
LQNQAFVPQQITVVPLGLESGTNKLSLSTPVTCELKSNGPQQRPVSLLPALVTPQAGSPV
IPNSILPLAWVVTPQALLPSAVQTVVGVPQGMPGAAGGSQCQPAVTSNGNVSGLGGTPAG
ANPPQPSSAETKGPSSQLAGVPLGKDDQSTVLLPVASVSPGCSTSSVSAVTPSCSDGSSM
APDSSAPPAAPPADSPAPCAVVLPQTQPPASTQGSDSQPVPSLTSLGKSSDSVTTKRSSS
NPDSIRKCVVLQPGAAAPHSNVPGSSGCSGAQARKKRPIASKPPSADVPPQPSTSSAEKN
LLDFSLISLEDEGLVKEWLSGKRGVQVPSLQTRLPYLPPFLCNIKTLSKLLVQKAALEEQ
AASLLPSEASGDGGTGDVFHAIGELVQQKLGDNPAYLLLXXXXFPLPAVLATLPPPKVTT
TLSASRKQYEESDDEEWQSEKEVSEEESCGNELTGVQEDWRLGDEPGDKDLDLLNQGMRA
EESAAQSALGSCTDVADARAPQIRRSARFRKRRRL
NT seq
4428 nt
NT seq
+upstream
nt +downstream
nt
atggaagtggaaagagaagaagacagcagtgatgatgatgatgatgatattgaaagcctg
ccacaggatccagaaacctgcctgcagatgaactatgtgtaccaggaaattatcaaggaa
aagattgaggaagtggagctgctcattgcacaaaacaaagaacagcagaaggaaatcatg
tgtgagcttgatggttcaaaaacagcaaaggcaggagatggcagaaatctaccagcaaat
gtgtttttgggtcattttatgaagccatactttaaggataaaacaacaggaattggccct
ccttccaatgaagatgccaaggaaaaggcagctcagggcataaaatcctttgaacaactg
cattcagccaagtggaaaactagagagaagacgctgctgcagaagtccgtggtgagcgac
cgcctgcagcgcctgctccagccaaagctgctcaagatgagttactggaatcagaaactg
gagaaagtcaagactgaaacagagaaacagaccttggaaaagcaaatcaaaggcttggag
caagaaatagagtcaattaaccaactcccagaaagtgacttaataggaaacagattcgat
gagcatgactgggacaagatttcaaacatccattttgatggacaacgtagctcagaagaa
ctgaggaagttttggcaaaattgggagcatccaagcatcaacaaaaaggaatggactgag
gaggaaatagagaggctgaagcagatagctgctaaacacaactacctggactggcagacc
attgcccaggagctggggacaaacaggacacctttccagtgcttgcagaagtaccaaatc
tataacaaagatttaaaaaggaaagaatggaccaaggatgaggatcagatgcttttagag
cttgttcaagagatgagagtgggaagccatatcccatacaagaaaattgcttattacatg
gaaggaagagattctgctcagctgatttaccgctggacaaagaatgtggaccccagcttg
aagaaaggaccctggacagcagaggaagatgctatgctgatggcagcagttaccaagtac
ggggcgaaggactggtacaaaatccgcacggaggtgccgggcaggagcgacgcccagtgc
cgagaccggtacttaaaagcattgcactgggatgtaaagaaaggcaagtggagcttggag
gaagaggagcagctgattgagctggttcaaaaacatggcctgggtcactggagtaaaata
gcttccgagctgccacatcggactggctcccaatgcctgagcaagtggaaactcatgatt
ggtgctaagaagaaaagatctggggcgaccaaacggcgtcacgctgaggagagctccagc
ccttcagagagcagcagtgaggaggacatggagctgaacttgacagacagctcagaggag
gaggaggtgaccagcaccgcaaggaagaaggagtatgcagtccccagcattgacctgtgg
atcccaacagggactgacatgcaggaggcaacgggagagagataccaaatccagtccctc
ctctctgctgcgagggctggtgcagggaccagctgcagtgacattccaagggcagccaga
gatggagacagagctgctgataaatcctctgagctgtacaccctgctgaagggcattgca
cagccccattccacagacgtggtggtgaagaatgcagcagaagtgatggccagggcttcc
cagagtggaaaacaagtgctgcaggtcagcctggaggacgtgagaacaatattaaagaat
aacacgagcttccagaggagacttatgctaaggcctcctggcagccttttagccaaaccc
ccaggagtgggtgcagctgttggccaggatgtccaggggctgcaggagctgccaaagaga
gctcagcgctgggccagggagcactggaagcggctgagcctggacaggaagctgctgatg
gcagtgaccccctgggtgggcaatgtgctgctgccccgcaccttgcaggctgggaggatg
gcttttcaccagacaaaagctgctgctattcaagagaaggttaagtcagtcagtcttact
agcactcccctgtttgcactgctcattcagctcttccagattgataccaaaggctgtatg
aaaattattaaggagaggaagctgaggcagttggagctgcttaaggctaatgcaaggagt
cctcagcaggcttcccaaaatacggagacttcttcaggcaattcatcccagccttgttcc
cagaggaattcccagcggggcataccaaggaatactgtcaggagacctcttgccttgaga
gcacgagaaccttccactggtgccttggagagctgtgcagccgtgcaggggcaggggcgg
aaggctaaaactgtcttggaattgctgcgagagaagcgtttaagggagtcccaggccaag
aaggccatgcagaggacagtgctggttgccccacaggtgctggtttcagggcctctgata
atccagcacccaccacagcaaatcattccctctgcacaagcagcaagcaaacctgcagca
gctgctggtacagatagccaagtacggggttcaccattgcccacaaggacttcttctgca
ggttctgcttctgcgctcgtgcctgaaaaccattcctcagcagtgccagaaactggggaa
agccctggttgctcacaagggacagatctacagtctaagaaggagctaaaagagcaagct
ctggaaagtagccctgaaggaaggggttttccaggcaaggatccatctgcagcagagaag
gccccagaacagcgagggtgcaatggtcaagtcacagccagtagctcagcttcagcagtg
ttgcaaaaccaggcttttgtgccacagcagatcacagtggtgccccttggcctggagtct
ggcaccaacaaattgtccctttccactccagtcacctgtgagctgaagagtaatgggcca
cagcagaggccagtcagcctgctgcccgctcttgtcactccacaggctggttcacccgtg
attcccaacagcatcctgcccttggcgtgggttgtcaccccccaggctctgctccccagt
gctgtgcagactgtggtgggtgttccccaaggaatgccaggtgctgctgggggaagtcag
tgtcagccagctgtgacttccaatggcaatgtctctggtttgggagggactccagctgga
gcaaatccacctcagcccagcagtgcagagacaaaagggccaagttcccagctggcagga
gttcctttgggaaaggatgaccagtccacagttctcttacctgtggcctcagtgagtcct
ggatgcagcacatccagcgtttctgctgtaaccccctcatgttcagatggctcctccatg
gctccagactcctctgctcctccagctgctcctccagctgacagcccagccccgtgtgct
gtggtgctgccccaaacacagccccctgccagcactcagggctctgattcccagcccgtg
cccagtctcaccagcttgggaaagagcagtgactctgtcacaacaaagagatcatcctcc
aatccagacagcatcaggaagtgtgttgtgctccagccaggagctgcagctcctcacagc
aatgtcccagggagctctggttgctctggtgcccaggcacggaagaagagacccattgcc
tccaaaccaccaagtgctgacgtccctccccagccaagcacttccagtgcagagaaaaat
ctccttgacttcagcctgatctccctggaggatgaggggctggtgaaggagtggctgagt
gggaaacgaggggtccaggtgccatcactgcagaccaggctgccttatttgccacctttt
ctctgcaacataaaaaccctctcaaagctccttgtgcagaaagcagccctggaagaacaa
gcagcctctctcctgccctctgaggccagtggggatgggggcactggggatgtcttccat
gctattggagaactggtgcagcagaaactgggtgataaccctgcttacctcctgctgnnn
nnnnnnnnnttccctctcccagctgtcctggcaactctgcctcctcccaaagtgacaaca
actctgtcagccagcaggaagcaatatgaggagagtgatgacgaggagtggcagagtgag
aaagaagtgtctgaggaagagagctgtgggaatgaattaacaggagtacaggaggattgg
agacttggggatgagcctggagacaaagatcttgatttactaaaccagggcatgagggct
gaagagagcgctgctcagtctgccttgggctcctgcactgatgtggctgatgccagagct
ccccaaatcaggagaagtgcccgcttcaggaagaggaggaggttatga
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integrated database retrieval system
