Corvus brachyrhynchos (American crow): 103623240 Help Entry 103623240         CDS       T08418                                  Symbol COL5A1 Name (RefSeq) collagen alpha-1(V) chain   KO K19721   collagen type V/XI/XXIV/XXVII, alpha Organism cbrc  Corvus brachyrhynchos (American crow) Pathway cbrc04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:cbrc00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     103623240 (COL5A1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:cbrc00536]     103623240 (COL5A1) Glycosaminoglycan binding proteins [BR:cbrc00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    103623240 (COL5A1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen COLFI Laminin_G_2 Laminin_G_1 Laminin_G_3 Motif Other DBs NCBI-GeneID:  103623240 NCBI-ProteinID:  XP_008640541 LinkDB All DBs Position Unknown AA seq 1818 aa AA seqDB search MDINFPCKRWAELIAEPADLLKVLDFHNLPDGITKTTGFCTSRRSSKEADVAYRVTKDAQ LSAPTKQLYPASPFPEDFSILTTVKAKKGGQSFLISIYNEQGIQQIGVELGRSPVFLYED HTGKPGPEDYPLFRGINLADGKWHRVALSVQKKNVTLVLDCKKKITKFLDRSEHPIIDVN GIIVFGTRILDEEVFEGDIQQLLIVADPRAALEYCEHYSPDCDTAIPDSPQSQDPNQDEY YTDGEGEGDTYYYEYPYYEDVDEAVKPEAPTTKPSPPEVAAGEKPQTKQDYPAPTAPPET GNPGKQPKEDGAVDDPLVDEYNYETINEEYFTPMPYEDLNYNEEIDPQGGLTENAVEAEL PTSTVVTYNDTDAAQGGDDLDKDFTEETIKEYDGNYYDNYYDRTASPDIGPGMPANQDTI YEGIGGPRGEKGQKGEPAIIEPGMLVEGPPGPEGPAGLPGPPGPTGPVGLMGDPGERGPP GRPGLPGADGLPGPPGTMLMLPFRFSGGGDAGSKGPLVSAQEAQAQAILQQARLALRGPA GPMGLTGRPGPMGPPGSGGLKGEAGEMGPQGPRGIQGPPGPAGKPGRRGRAGSDGARGMP GQTGPKGDRGFDGLAGLPGEKGNRGEPGPHGPPGAPGEDGERGDDGEVGPRGLPGEPGPR GLLGPKGPPGPPGPPGVAGMDGQTGPKGNVGPQGEPGPPGQQGNPGAQGLPGPQGAIGPP GEKGPLGKPGLPGMPGADGPPGHPGKEGPPGEKGSQGPPGPQGPIGYPGPRGVKGADGVR GLKGTKGEKGEDGFPGFKGDMGIKGDRGEIGPPGPRGEDGPEGPKGRSGPNGDPGPLGPA GEKGKLGVPGLPGYPGRQGPKGSIGFPGFPGANGEKGTRGTPGKPGPRGQRGPTGPRGER GPRGSTGKPGPKGNSGGDGPPGPPGERGPPGPQGPTGFPGPKGPPGPPGKDGLPGHPGQR GETGFQGKTGPPGPPGVVGPQGPTGETGPMGERGHPGPPGPPGEQGLPGLTGKEGTKGDP GPAGLPGKDGPPGLRGFPGERGLPGPIGSPGLKGNEGPPGPPGPAGSPGERGPAGSAGPI GLPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGIQGPVGLPGPAGPVGPPGEDGDKGEI GEPGQKGSKGDKGEQGPPGPTGPQGPIGQPGPAGADGEPGPRGQQGLFGQKGDEGPRGFP GPPGPVGLQGLPGPPGEKGETGDVGQMGPPGPPGPRGPSGPPGADGPQGPPGGIGNPGAV GEKGEPGESGEPGLPGEVGLPGPKGERGEKGEAGPSGAAGPPGPKGPPGDDGPKGSPGPV GFPGDPGPPGEPGPAGQDGPPGDKGDDGEPGQTGSPGPTGEPGPSGPPGKRGPPGPAGPE GRQGEKGAKGEAGLEGPPGKTGPIGPQGAPGKPGPDGLRGIPGPVGEQGLPGSPGPDGPP GPMGPPGLPGLKGDSGPKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSAGPKGEQGIT GPSGPIGPPGPPGLPGPPGPKGAKGSSGPTGPKGESGLPGPPGPPGPPGEVIQPLPIQAS KRTRRNIDASQLLDDGNADNYMDYADGMEEIFGSLNSLKLEIEQMKHPLGTQHNPARTCK DLQLCHPDFPDGEYWVDPNQGCSRDSFKVYCNFTAGGETCIFPDKKSEGSKMARWPKEQP STWYSQYKRGSLLSYVDSDGNPIGVVQMTFLRLLSASAHQNITYNCYQSVAWHDATTNSY DKAIRFLGSNDEEMSFDNNPYIRAALDGCAARKGYQKTILEINTPKVEQVPIVDIMFNDF GEAAQKFGFEVGPACFLG NT seq 5457 nt NT seq  +upstreamnt  +downstreamnt atggacatcaattttccgtgcaaacgttgggctgagcttattgctgaacccgcagacctc ttgaaggtgttagattttcataatttacctgacggtatcacaaaaaccacagggttttgc acaagcagaagatcttcaaaagaagcagacgttgcttacagagtaacaaaagatgctcag ctcagtgccccgacaaagcagctgtatcctgcttcccccttcccagaggacttctccatt ctaaccactgtaaaagcgaagaaaggaggtcagtccttcttgatctcaatttacaatgag caagggatccagcaaattggtgtggagttgggtagatctcctgtattcctgtatgaagac catacaggaaagccaggcccagaagactatcctctctttagaggcattaacctagcagat ggcaagtggcaccgagtggctctgagtgtgcagaagaaaaacgtcaccttggttctggac tgtaaaaagaaaatcaccaagttcctggaccggagcgagcatcccatcatcgatgtcaac ggcatcatcgtgttcggcaccaggatattggatgaggaggtctttgagggtgacatccag cagctcctgatcgtggcggacccgcgggcagccctcgagtactgtgagcactacagcccc gactgtgacaccgccatccccgactccccacagtcccaggaccccaaccaggacgaatac tacacagacggggagggagaaggtgacacctactactacgagtacccctactacgaggat gttgatgaagctgtcaaaccagaagcccccaccaccaaacccagccctcctgaagtggct gctggagagaaaccccaaaccaagcaggattatccagctcccacagcaccccctgagaca gggaaccctgggaagcagcccaaggaggatggagcagtggatgatcccctcgttgacgag tacaactacgagaccatcaatgaggagtatttcacccccatgccctacgaggatctcaac tacaacgaggaaatcgatccccagggtggcctcactgaaaatgccgtggaagctgaactc cccacgagcactgtcgtcacctacaacgacactgatgctgctcaaggaggggatgacctg gataaggatttcactgaggaaaccataaaggaatatgatgggaattattatgacaattac tatgaccggacagcctctcccgacatcgggcccggcatgccagccaaccaggacaccatc tacgaagggatcggtggcccccggggtgagaagggacagaagggggaacctgccattatt gagccgggaatgctggtggaaggtccccctggtcctgaaggcccagcaggccttccagga cctccaggaccaactggacccgtgggcttaatgggtgacccaggggagaggggcccccct gggcgcccaggtctcccaggagcagatggattgccaggaccaccagggacaatgcttatg ttgcctttccgcttcagtggaggaggagatgctggctccaaaggacctctggtgtcagcc caggaggcacaagcccaggccatcctgcagcaggccaggctggcactgaggggaccagcg gggcccatgggcctgacggggcggccaggcccgatgggacccccaggcagtggaggactg aagggagaagctggagaaatgggacctcagggtccacgaggcatccaaggtcctcccggc ccggcaggaaaaccaggccgcaggggacgagctggcagtgatggtgcccggggaatgcca ggccagacaggaccaaagggtgaccgggggtttgatggcttggctggtttgcctggtgag aagggaaacaggggtgagccaggcccccacggccccccgggggctcctggagaggatggg gagaggggagatgatggagaagttggacccagaggtctccctggagaacctggaccccga ggactgctgggccccaagggacccccaggacccccggggccaccgggtgtggctggcatg gatggacaaacaggtcccaaagggaatgtgggccctcagggcgagccaggccccccagga cagcaggggaacccaggggctcagggtcttccaggtccacaaggtgccatcggtccccca ggagagaaaggcccgctgggcaaacctggcctccctggcatgcctggtgctgatgggccc ccgggtcatcctggcaaggaaggccctcctggagagaaggggagtcagggtccccccggt cctcagggccccattggttatccaggaccacgtggagtcaagggagcagatggagttcgt gggttgaaaggcaccaagggggaaaagggtgaagatggtttccctggcttcaaaggtgac atgggcatcaaaggagaccggggggaaattggaccccccggccctcggggtgaggatggg cccgaaggtcccaaaggtcgctctggccccaatggagatccagggcctcttgggcctgct ggagagaagggaaaactcggcgtgccaggactgcctgggtatccgggcaggcagggcccg aagggctccatcggcttcccaggatttccaggagccaacggagagaagggcacacggggc actcctggcaaaccaggtccaagggggcagcgtggtccgacgggtccacgtggggaaaga ggccccaggggaagcactggaaaacctggcccgaagggcaactctggtggtgacggcccc cctggtcctcctggagagcggggaccaccagggcctcaaggaccgactggatttcctgga ccaaaaggcccccctggtcctcctgggaaggatggattgcctgggcaccctggacagaga ggagaaactggtttccaaggcaagactggccctccaggcccccctggtgtcgtaggccct cagggtccaactggtgagactgggcccatgggtgagcgggggcatccaggccctccgggt cccccgggtgaacaaggccttcctggcctcactggaaaagaagggaccaagggggatccc ggtcccgccggcctcccagggaaggacggtccccctggactgagaggattccctggagag cgaggcctccccggccccattggttctccagggctgaaaggcaacgaaggtcccccaggc cctccaggcccagccggctctcctggggagcgtggtcctgcaggatcagctggccctata ggactgccagggagacctggccctcagggacctccaggacctgcgggtgaaaagggagct ccaggggagaagggtccccaaggaccggctggccgggatggcatccagggccccgtggga ctgccgggcccagcaggtcctgttggacctcctggagaggatggagataagggtgagatc ggggagcctgggcagaagggcagcaaaggtgacaagggggagcagggtcccccaggcccc accggcccacagggtccgattggtcagcctggcccagctggagctgatggagagcccggg ccccgaggacagcaaggcctctttggtcagaaaggtgacgaaggaccccgaggtttccct ggcccccccggccccgtgggcttgcagggcctgcctggaccacctggggagaagggagaa acaggtgacgttgggcagatgggtccaccaggcccaccaggacccagaggtccatctggg ccaccaggagcagatggtccacagggccctcctgggggaataggaaatcctggtgcagta ggagagaagggtgaacctggggaatctggtgagcctggtctccctggcgaggttggtctc ccgggccctaaaggtgaaagaggtgaaaagggggaagcaggtccctctggtgctgctggt ccacctggccccaaaggcccaccaggtgatgatggccccaaaggcagccctggtcctgtt ggtttccctggtgaccctggtcctcctggagagcctggcccagctggtcaagatggtccc cctggtgacaaaggtgatgatggtgaacctggacagactggttcccccgggcccacggga gagccaggcccctctggacccccagggaaaaggggccctcctggtccagctggtcctgaa ggaaggcaaggagagaaaggagccaagggggaagctggtttggaaggacctcctgggaag actgggcccattggtccccaaggtgctccagggaagcccggccccgatggccttcgtggg attcctggtccagttggtgaacaaggtctcccgggatcccctggcccagatggtcctcca ggcccaatgggccctccgggtttgcctggtctgaaaggagactctggtcctaaaggggag aagggtcacccaggtttaattggtcttattggcccacccggagagcagggagaaaagggt gacagaggtctcccaggcccccagggctcagcaggacccaaaggagaacagggtatcaca ggtccttctggacccatcggacctccagggcccccaggattaccgggtccacctggtccc aaaggtgctaaaggctcatcaggtcccacaggtccaaagggtgaatctggtcttcctggg cccccagggcctcctggtcctcctggagaagtcatccagcccctgcccatccaggcatcc aagaggaccaggaggaacattgatgccagccagctgctggacgacgggaacgccgacaac tacatggactatgccgacggcatggaggagatcttcggctccctgaactccttgaaactg gaaattgagcagatgaagcatcccttgggcactcagcacaacccagcacggacctgcaag gacctgcagctctgccaccctgatttcccagacggtgaatactgggttgatcccaaccaa ggatgttccagggactctttcaaagtttactgtaatttcacggctggtggagagacctgc atcttccctgataagaaatctgaaggaagtaaaatggctcgttggcccaaagaacagcct tccacatggtatagtcaatacaagcgggggtccttgctctcctacgtggactcggacggg aaccccatcggggtggtgcagatgaccttcctgcgtctcctgagcgcctcggcccaccag aacatcacctacaactgctaccagtccgtggcctggcacgatgccaccaccaacagctac gacaaggccatccgcttcctgggctccaacgacgaggagatgtccttcgacaacaacccc tacatccgagccgccctcgatggctgcgcggcaaggaagggctaccagaaaaccatcctg gaaatcaacacgcccaaagtggagcaggtccccatagtcgacatcatgttcaatgacttc ggagaagcagcacagaaatttggattcgaggtgggaccagcttgcttcctgggctaa

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