Corvus brachyrhynchos (American crow): 103623263
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Entry
103623263 CDS
T08418
Symbol
NUP214
Name
(RefSeq) nuclear pore complex protein Nup214 isoform X1
KO
K14317
nuclear pore complex protein Nup214
Organism
cbrc
Corvus brachyrhynchos (American crow)
Pathway
cbrc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cbrc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103623263 (NUP214)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbrc03019
]
103623263 (NUP214)
Messenger RNA biogenesis [BR:
cbrc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
103623263 (NUP214)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_NUP159_NUP214
WD40_WDHD1_1st
Beta-prop_EML_2
WD40
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
ANAPC4_WD40
WD40_CDC20-Fz
Beta-prop_RIG_2nd
Beta-prop_HPS5
Beta-prop_WDR19_1st
WD40_Prp19
WDR55
Motif
Other DBs
NCBI-GeneID:
103623263
NCBI-ProteinID:
XP_017600996
LinkDB
All DBs
Position
Unknown
AA seq
2072 aa
AA seq
DB search
MKDFQFRALKKVRIFDAPDDLPKERSSLLAVSNKYGLVFAGGGTSLQIFHTRDLLMQKQL
GEDPNKIEENIQSTVVPMKFPVQHLALSCDNLTLSVCMMSSEIRSFISFFDVRTFLNQAK
QQKHAFACHKLAKDSGSTAMVSDLKWNPANPTMVAICLSDGSISVLQVTDSVKVYATLPS
SAAVTCVCWSPKGKQLAAGRQNGTVVQYLPNLQEKKVIPCPPFYDSDNPVKVLDVLWIGT
YVFSIVYAEADGTLEMSPQVVIAILPKKEEKRPEKFVNFMEPCYTSCTERQHHYFLNFVE
EWDLVLAASAASTEVSILARQGDQNWELWVLEDSSRAELPVTDKSDDTLPVGVAVDYTSN
MPIMISDEKILAPAPVLILLSTDGVLCPFYMINQNPGVRSLIVTPEPLQLVGERVPKSTG
STATSPTTPPTSLKPDTVPGVAPTVPTSSQPPAGSGAAVFSFMPSAAKTPGSTGSDPPPY
SFATDASKQAQTPALTGAATFSFSSASSKASMTPASVGTTTATATSFPFGSMNFKPAADS
SSGPSLSTAPAAQKSSFAPSASSVKVNLSEKFSAVDTSSPTSSSGQCTSTMFSFSTSSKT
APGGSLSQSTPITAPPTTPLKTSSPVPATVARPAQNAPSASLVQKTPKITPSAAKPSSAQ
GKSALPSTALEKQTHQWKESDPVIAGIREEIAHFQKEMEELKARTSKACFQVGTPEEMKM
LRTESDDLHTFLLEIKETTESLHGDISILKTTLLEGFAGVEEAKEQNEQNRSLGYLHLLY
KKPLDPKSEAQLQEIRRLHQYVKFAVQDVNDVLDLEWDRHLEQKRKQKRLIVPERETLFN
ALANNREIINQQRKRLNHLVNSLQQLRLYNQTSQWSVPSDTSPNSAQSFDSDLESLRNDL
MKTTLKSQAKPLPKVPAKLSPVKQAQLRNFLAKRKTPPIRSTAPASLSRSAFLSTRYYED
LDEVSSTSSVSQSLENDDSQAVDQEEEAAPVQVPRHAPVVRTPSIQPGLMAQPPSFGKQH
LSLGTLLPTSSNRIIPQGADSTMLATKTVKHGAPAPTVTVPAPQAAAAAALQRQMAANQS
PAVSTSLTESTLKNVPQVVNVRELKSGALTPAVSAVIGSSVPHSAAQAVHQVLATVATNQ
AKQTPLTSSMKGQAPPSSVCAPSPMASTAGPASSGNKVSGQGTVKTVTAVSSTVTSVQAT
TSQPNKTFSFSSAGSVFNFSGVTSAASSQTLPSLAPSQAPAKESAQPDSFLFAGSSKLGT
IPEASFAFGSHKSAGAPGGVVGGGSSADGTQSNKAAATSSAPPTTSGKLDITPSKPGDHL
FQGSLAGETLGSFSGLRVGQVDDNAKTTTKAPSTSVAGTQSTKVSTIPSGFNFAAPLALG
KAGEAASTSVTSAGTASLSISTSATGSLFGNVQLTNTGSSGVFNLGGSGGNKPAFSFGIQ
QANSMSTSTSTPSTLPASTSLSFGGFSSSSQTAVPAATSSKSAGDAKLPPGSEKPSENEA
VAAGSSPPVPQPQAQLSEPLKEPTLPQATAGDSVPEGSGTTVAPPPPDPVAAPTSTSDLK
ALVPPAVSAAAPPDQNVSATTSTASVASAAEATSALAATSDVTTGVQSPAVGASVFPPTS
AGSSVFSQPPSSSSSGSAFTQPAGETAATPSTPPVFGQLPAGTTASSPFGQLTTSTLSTA
TATTQAATSGFGTSAFGTTTTGGFGQPAFGQAPIFGQPASSSSSGFTFSHSGFGTMPAFG
QPAASTAASSSGNVFGAPASTNSASSFSFGQPASTGGVLFGQSSPPVFGQSTGFGQGASV
FGGTAAVTTTTSSAGFSFCQASGFGSSNTGSVFGQAANTGGTVFGQQPSSSSAGLFGAGS
GGRGGGFFSGLGGKPSQDAANKNPFSSSSGGFGSAASQNSSSLFGNSGAKTFGFGSSSFG
EQKPTGTFSSGGGSVASQGFGFSSPNKAGGFGAAPVFGSPPTFGGSPGFGGVPAFGSAPT
FSSPLGSTGGKVFGEGTAAASAGGFGFGGTSNNTASFGTLANQNTPTFGSLSQQGSGFGT
QSSGFSAFGTGGGGFGFGSPNTSSSGFSGWRS
NT seq
6219 nt
NT seq
+upstream
nt +downstream
nt
atgaaggattttcagttcagagcactgaagaaggttcgcatctttgatgctcctgatgat
cttcccaaagagcgttccagcctcctcgcagtgtccaacaaatatgggctggtctttgct
ggtggagggaccagcctgcagatcttccacaccagggatcttctcatgcagaaacagctg
ggagaagatcccaataaaattgaggagaatattcagagtactgtggttcccatgaagttt
cctgtgcagcacctggctctgagctgtgacaatctcaccctgtctgtctgtatgatgtcc
agcgagatcaggtctttcatcagcttttttgatgtccgcacattcctaaatcaggcaaaa
cagcagaaacatgcttttgcttgtcacaaactggccaaggactcgggaagcacagccatg
gtcagtgacctgaagtggaaccctgccaaccccaccatggtggccatctgcctgtccgat
ggcagcatctctgtcctgcaggtcacagactctgtgaaggtctatgccaccctcccatcc
tctgctgctgtcacatgtgtgtgttggagcccaaagggaaaacaactggctgcagggagg
caaaatggcaccgtggtgcaatatctgcctaatctgcaggagaagaaagtaatcccttgt
cctcccttttatgattcggacaatcccgttaaagttttggatgtactttggattggcaca
tatgtctttagcattgtgtatgcagaggctgatgggaccctggaaatgtcgccacaagtg
gtcattgccatattgcctaaaaaagaagagaagcgaccagagaagtttgtgaatttcatg
gagccgtgctacacgagctgcactgagagacagcatcattacttcctcaattttgttgag
gaatgggatctagttctggcagcttcagcagcttccacagaagtcagcattcttgccagg
cagggggatcagaactgggaattgtgggttttggaggactccagcagagcagaacttcct
gtgacagataaaagtgatgacactctgcccgttggtgttgctgtagattacaccagtaac
atgcccatcatgatcagtgatgagaagatccttgctccagctccagttctgatcctgctc
tctacggatggtgtgctctgcccgttttacatgatcaaccaaaacccaggggtcaggtca
cttattgtgaccccagagcctctgcagctggtgggggagagagttccaaagtcaacagga
agtactgccacaagtccaaccactcctccaacttctctaaagcctgacacagtgccaggt
gttgctcccactgtgcccacctcaagtcagcctccagcagggagtggagcagctgttttt
tccttcatgccttcagctgcgaagactcctggctccacgggcagtgatcctccaccgtat
tcctttgccaccgatgcctccaagcaagcccagactcctgctctgactggagcagcaaca
ttctccttctcctctgcttcttccaaggcatccatgactcctgcttctgtaggcaccaca
acagctactgccacctcctttccttttgggtccatgaactttaaaccagctgcagacagc
tcgtctgggccatcgctctccacagcacctgctgcacagaagtcatcttttgcaccttca
gcttcttcagtcaaagtgaacctcagtgagaagttcagtgctgtagacacctcttctccc
acgagcagcagtggtcaatgcacttccacgatgttttccttctcaaccagttccaaaact
gctcctggaggttctctgagccagtccacgcccatcacagcccctcctaccacaccactg
aagacttcatctcctgtgcctgccacagtggcacgtcctgctcaaaatgctccttcagct
tcgttggtacagaagacacccaaaatcaccccctcagcagcaaagccaagctctgctcag
ggaaaatcagcactccccagcacagctttagagaaacagacccaccagtggaaggagtca
gaccctgtcatagcaggaatcagggaggagattgcacattttcaaaaggagatggaggag
ctgaaggcccggacttccaaagcctgtttccaagttggaactccagaggaaatgaagatg
ttgcgaactgagtcagatgatcttcacaccttcctcttggaaattaaagagacaacagag
tcacttcatggagatatcagtattctgaagacaaccttgctggagggatttgcaggggta
gaagaggctaaagaacagaacgaacagaatcgtagcttggggtatttacacttgctctat
aagaaacctttggatcccaagagtgaagcacagcttcaggaaatccggcgcttgcaccag
tacgtgaagtttgctgttcaggacgtgaatgacgttctggatttggaatgggatcggcac
ctggaacagaagagaaagcagaagcgtctgatagtccctgagcgagagactttgttcaac
gccctggcaaacaaccgggaaattatcaaccagcagaggaagagactgaaccacctggtg
aacagcctgcagcagctccgcctctacaaccagacatctcagtggagtgttcccagtgat
acatctccaaacagtgctcagagttttgacagtgaccttgaaagcctgcgcaacgatttg
atgaaaactactttgaaatcacaggccaaacctctgcccaaagtacctgctaagttatcc
ccagtgaagcaggcacagttgaggaattttctagccaagaggaaaactccaccaattagg
tctacagctccagcaagtttgtcccgatctgccttcttgtccacgagatactatgaagat
ttggatgaagtcagctcaacatcctcagtttcccagtcactggagaatgatgattcacaa
gcagtggaccaggaagaagaggcagccccagtccaagtccctcgtcatgctcctgtggtc
cgaactccctcaatccagcctggcttgatggctcagcctccgtcctttgggaaacagcac
ctctccctgggtactctgttgcctacatcttcaaacagaatcatcccacaaggggcagac
agtaccatgcttgcaacaaagactgtgaaacacggggcccctgctcccactgtcactgtt
ccagcaccacaagcagctgctgctgcagctctgcagaggcagatggctgctaaccagtcc
ccagctgtgagcacttccttgactgaatcaactctgaagaacgttcctcaggtggtgaat
gttcgagaactcaagtctggtgcattgactccagcagtctctgcagtgataggatcatct
gtgcctcactctgcagcccaggcggtccatcaagttttggcaactgttgctacaaatcaa
gctaaacagacacctctgacaagctcgatgaagggccaggctccaccttcctctgtgtgt
gctccctctcctatggcatccacagctggtccagcatcgtctggcaacaaggtctcagga
caagggacagtaaaaacagttacagctgtttcttctactgtgacatcagtacaagcaaca
acttcacagcctaacaaaacgttctcgttttcttctgcggggtctgtatttaattttagt
ggtgtcacatcagctgcttcatcacagacactgcccagccttgctccctcacaagcccct
gcaaaagagtctgcccagccggattcatttctgtttgctgggagttccaaacttggaaca
attcccgaggcctcctttgcttttgggtcccacaagtcagcaggtgctccaggaggtgta
gtaggaggtggctcctcagcagatggcacccagtcaaacaaagctgctgcaacatcttct
gctccccccacaacctctggcaagttggatattactccatccaaaccaggagatcacttg
tttcagggcagtctagctggggaaactcttgggagcttctcaggactacgggttggtcaa
gtagatgataatgccaagaccaccactaaagcaccatctaccagtgttgcaggaacacag
tcaactaaagtgtctacaataccttctgggtttaattttgctgctcccctggcattagga
aaagctggagaagctgcttcaacgtcagtcacgtcagctggcacagcatccctgtccatc
agcactagtgccacaggcagtctctttggcaatgtccagttaaccaacacagggtcttct
ggggtgtttaatcttggaggttctggtggcaacaaacctgccttttcatttggtattcag
caagcaaacagtatgagcacatccacctctaccccttctactctccctgcttcaacgtcc
ctctcgtttggaggtttctcaagttcatcacaaactgctgtccctgctgcaacttccagt
aagtctgcaggggatgccaaattaccacctgggtcagaaaaaccatctgaaaatgaagcc
gtagcagctgggtcttcacctccagtgccacagcctcaggcacagctctcagagccactt
aaagaacccaccttaccccaggccacagctggggactccgtcccagagggctctgggacc
acagtggcaccacctccccctgaccccgtggctgctcccacctccaccagcgatctgaag
gccctggtgcctcctgctgtctctgcagccgccccaccagatcagaatgtctcagcaaca
acctccacagcaagtgttgcctctgctgcagaagccacaagtgctctggctgctacctct
gatgttactacaggtgtgcagagtccagctgttggtgcctctgtgtttcctcccacttct
gcaggctcctcggtgttctctcagccaccaagttccagctcttctggctcagcatttacc
cagcctgctggggaaacagctgccactccttccacaccacctgtttttggacagctccca
gcaggtaccacagcatcctctccattcgggcagctcaccaccagcactctgtccacagcc
actgccaccacccaggctgccacctcaggctttggtacttctgcttttggcaccaccacg
acagggggctttggccagccagcctttgggcaagcaccaatctttgggcaacctgcaagc
agttcttcaagtggctttaccttcagccactctgggtttgggacaatgccagcctttggc
cagccagcagcttccacagcagcctcaagcagtgggaatgtttttggagccccagccagc
accaacagcgccagctccttctccttcggccagccagccagcacgggcggggtgctcttt
gggcagagcagccctcctgtgtttgggcagagcactggctttgggcaaggggcatctgtg
ttcggtggcaccgctgctgtcaccaccaccacgtcctctgctgggttcagcttctgccag
gcctcaggttttggttctagtaacacaggttctgtgtttgggcaagcagcaaatactgga
ggcactgtctttggccagcagccatcttcttccagtgcaggcttgtttggagctggaagt
ggtgggagaggtggaggcttcttcagtggtttaggaggaaagccaagtcaggatgcagcc
aataagaatcccttcagttcctccagtggaggatttggatctgcagcttcccagaattct
tcgagcttatttgggaacagcggggcaaagacttttggatttggcagctcctcctttgga
gagcagaagcctacgggcactttcagctccggtggtggaagtgtggcctcccaaggcttt
gggttctccagtccaaacaaagcaggtggcttcggtgctgctccagtgtttggcagccct
cccacttttgggggatcccctgggtttggaggggtgccagcattcggttcagccccaacc
ttttcaagccctctgggctcaacgggaggcaaagtgttcggcgaggggacagcagcagcc
agcgctggaggatttgggtttggtggtaccagtaacaacacggcgtcgtttggcaccttg
gcaaaccaaaacacccccacgtttggctccctgtcccagcagggcagcggctttggcaca
caaagcagtggattctcagcttttgggacaggtggaggagggtttggttttggatcacct
aacacatcttcctctggatttagtggatggagaagctag
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integrated database retrieval system
