Corvus brachyrhynchos (American crow): 103623637
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Entry
103623637 CDS
T08418
Symbol
JMJD1C
Name
(RefSeq) LOW QUALITY PROTEIN: probable JmjC domain-containing histone demethylation protein 2C
KO
K11449
jumonji domain-containing protein 1C [EC:1.14.11.-]
Organism
cbrc
Corvus brachyrhynchos (American crow)
Brite
KEGG Orthology (KO) [BR:
cbrc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cbrc03036
]
103623637 (JMJD1C)
Chromosome and associated proteins [BR:
cbrc03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
103623637 (JMJD1C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tudor_KDM3B
JmjC
zf-C5HC2
C1_2
FYVE
Motif
Other DBs
NCBI-GeneID:
103623637
NCBI-ProteinID:
XP_008640981
LinkDB
All DBs
Position
Unknown
AA seq
2354 aa
AA seq
DB search
MQGPYSLNGYRVRVYRQDSATQWFTGIITHHDLFTRTMVVMNDQVLEPQNVDPSMVQMTF
LDDVVHSLLKGENIGITSRRRSRSNQNSNTVHGHYTRAQANSPRPAMNSQTAAPKQNSHQ
HQQQRNIRPNKRKGSDSSMPDEEKMKDERYDYIGRGENPKTKNKHFLSKRRKPEEDEKKL
NMKRLRTDNISDYSESSDSEISNKRLTDSSSEQNSENELKSKNSSKINGEERKSQTTEGV
EQTLTDRRSPWDEVQQDKNHEETERLKSSVLDQHEKSSLHAAEXASKNEQNAKDPHVQEC
NAEKHHTVELKNEQFLPRPPTPKCVVDVTNKNNSEKENQDNAASTFGLQAVQKIESHSSD
LKQQFTNANFLEARKQEADQGWVSSVGKTDLIQPGVVKTLPVNEHLNSEKVQYGSFMSSL
NVASVAEESKLRKQSPVPDSVKSKSSASVDHPKTKSPDVKPKFTQSSDTVKSKVSSQNSH
ATGLTRSANKTDHDLPRSSFHPVPARVSALEATKSPLIIDKNEHFTVYRDPSLIGQETGT
NHISPYLHQHNYPLHSSSHRTCLNPNAHHPALTGSSHLLAGSSAQAPLSAINTHPLSSAS
HHSVHHPHLLPAVLPGVPAASLLGAHPRLETAHASSLSHLALAHQQQQQMLQHQSPHLLG
QAHPSASYNQLGLYPIIWQYPNGTHAYSGLGLPSSKWVHPETPVNAEASLRRNTPSPWLH
QPTPVTSADSLGLLSHIPVRPSSADPLRPLKLATHSSPPLSKSIVDHRKEELERKTFVDP
LRSVTTAPVKSELEQSRTQAAKESHMHRHYADPMLNQLPRPPQETGERLSKYKEEHRRIL
QESIEVAPFTAKIKALEGERENYSRVTSLSSSPKSHSVKYDKDAERSVSELYKMKHSVPQ
SLPQSNYFTTLSNSVVNEPPRSYPSKEASGAYVDKQANCPSTAASPQALPSYISSLSKPP
PLIKHQPESEGSTSKIPEQLPQSVQSHSVNSFRSDSRSPTQLSVSSSNTLRSMPALHRAP
VFHPPVHQSLEKKESSYSSLSPPTLTPVQPVNAGGGKIQELQKPPTLVPEPKEAQTVYKG
TSEQNLSEMWKSNNAPNNEKVDWHSERMSGKSQSATASVIVRPPSSTKYENVPVMQSASK
DRVSERSSAVTNQADCLKTAEARETGRVILPNMNSDSARTQYEKKFPAVSQGSIPRAVTP
TTTIICSTKTDVTASAATTTSVSSRGSSEVTYSVSSAVSCAPLECAAPRAAGQAAAQPQE
CKVSTSAPVASAVGSTGSAAQPSSGFSTSTDFVHLKKHKAALAAAQFKSSNTTETESNSV
KNQTFSTSLSLDSAIVCNTINKANSVGSGQTSQTSQPNYHTKLKKAWLTRHSEEDKNTNK
KENSGNSVSEIIKPCTVNLIASTSNDLQNNIDSKILADKFVKEDKHPRRKGKRTYESGSE
SGDSDESESKSEQRTKRQPKPTYKKKQNDLQKKKGDTEEEVKPNGVLSRSAKEKSKLKLQ
SGSNSTGIPRSVLKDWRKVKKLKQTGESFLQDDSCSEIGPNLQKCRECRLIRSKKGEEPT
HSPVFCRFYYFRRLSFSKNGVVRIDGFSSPDQYDDEALSLWTHENYEDDELDLETSKYIL
DIIGDKFCQLVTSEKTAMSWVKKDAKIAWKRAVRGVREMCDACEATLFNIHWVCQKCGFV
VCLDCYKAKERKSSRDKELYAWMKCVKGQPHDHKHLMPTQIIPGSVLTDLLDAMHNIREK
FEMKSHCQCTTKQSTQAAKLPAMNGVSQVLQNVLNHSNKISLCMPESQQQNIPQKSETNG
NTSPRSDVSTDSKLTPPESQSPLHWLADLAEQKAREEKKENKECPSGKQSKEEKDQDNLE
SPNCKSSPPASQNNEQGSTLRDLLTTTAGKLRLGSTDAGIAFAPVYSTGAASGKSGRTMP
NILDDIIASVVENKIPPNRAPKINVKSEIKDEPKDDKKCIQDDCSKRYSDIQYSWICDKH
VLWLRDHKNSNNWKLFKECWKQGRPVLVSGMHKKMNFSLWKAESISLDFGNQQADILNCK
DSIISNTNVKEFWDGFEDVSKRQKVKNGETALLKLKDWPSGEDFKAMMPARYDDLLKSLP
LPEYCSPEGKLNLASHLPGFFVRPDLGPRLCSAYGVAATKDHDIGTTNLHIEVSDVVNIL
VYVGIAKGNGVLSKSGVLKKLEEEDLDDLLRKRLKDSSELPGALWHIYAGKDADKIREFL
QKIAKEQGLEVLPEHDPIRDQSWYVNKKLRQRLFEEYGVKTCTVIQFLGDAIILPAGALH
QVQNFHSCVQVTEDFVSPEHLVQSFHLTQELRLSKEEINYDDKLQVKNILYHAVKEMVRA
LKIHEGEMEDTDEN
NT seq
7065 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggtccgtactccttaaatggttatagggtgagagtgtacagacaggattctgcc
acccagtggtttactggcatcatcactcaccatgatctcttcacccgcactatggtggtt
atgaatgaccaggtgttagaaccccagaatgttgatccttctatggttcagatgaccttt
ctagatgatgttgttcactctttgttgaaaggtgaaaatattggcatcacttcacgccgg
cggtctcgttccaaccagaacagcaacacagttcacggtcattatacacgtgcacaagca
aatagtcccagaccagcaatgaattcccaaactgcagcaccaaaacagaattctcaccag
caccaacaacagaggaatattcggccaaataagaggaaaggctctgacagcagcatgcct
gatgaagagaagatgaaagatgaaagatatgattatataggtcgaggagaaaaccccaaa
accaaaaataaacactttcttagtaaaagaagaaaacctgaagaggatgaaaaaaaatta
aatatgaagagactgcggacagacaatatctcagattattctgagagcagtgactcggaa
atttcaaataaaagattaacagattcatcctcagagcaaaattcagaaaatgagttaaaa
agcaagaactcttcaaagataaatggagaagaaagaaaatcccaaactactgagggagta
gaacagacactaacagatagacggtctccatgggatgaagtacagcaggataaaaaccat
gaagagactgaaagactgaaatcgtcagtcttggatcagcacgaaaaatcttcactccac
gcagcagagnaagccagcaaaaatgagcagaatgccaaggatccacatgttcaagagtgt
aatgcagaaaaacatcatactgtggagttaaagaatgagcagtttttacccagaccacct
actccgaaatgtgttgttgacgttactaataaaaacaactctgaaaaggagaaccaggat
aatgctgcaagtacctttggtttgcaagcagttcagaaaatagaatctcacagcagtgat
ttaaagcagcaatttacaaatgcaaatttccttgaagcaaggaaacaggaagctgatcaa
ggttgggttagcagtgttggtaaaacggatttgatacaacctggggttgtaaaaacatta
ccagtaaatgaacacttaaattctgaaaaagtgcagtatggctcatttatgtcttcgtta
aatgtagcttctgtagcagaagagagtaaactgcgtaaacaaagtccagtccccgattct
gtgaagtcaaaatctagtgcttcagttgatcatcctaaaacaaagtcacctgatgttaag
cctaaattcacccaatcttctgatactgtgaagtctaaggttagttcccaaaacagtcat
gctactggattaacaaggtcagccaataaaactgatcatgatttgcctaggtctagtttt
catccagttccagctagagttagtgctctagaagctactaagagtcctcttatcattgac
aagaatgaacatttcacagtatacagggaccccagtctgattggacaagaaacaggaact
aatcacatttcaccttacttgcatcagcataattatcctctgcattcctcatcccaccga
acctgtttaaatccaaacgctcatcatcctgcattaactggttcatcccatctgctcgct
gggtcttcagctcaggctcccttgtccgctattaacactcacccccttagtagcgcatct
caccattctgttcatcaccctcatctacttcccgcagtgttgcccggagtgcctgctgcc
tccctgctgggtgcccacccgcgactagagactgctcatgctagcagcttaagccatttg
gcattagcacaccagcagcagcaacagatgttacaacaccagtctccacatcttctcgga
caagctcatccttctgcttcctataatcagctagggctttatccaattatttggcagtat
ccaaatggaacacatgcttactcaggactcggtctgccctcctccaaatgggtccaccca
gaaactcctgttaacgcagaggcttccttgagaaggaatactcccagcccctggttacat
cagcccaccccagtgacctcagctgacagccttggtttactgagtcacattcctgtgcga
ccgtccagcgcagatccccttcggcctcttaaactggctacgcattccagcccaccattg
tccaaaagtattgtagaccatcgcaaagaagaactggagagaaaaacgtttgttgaccct
ttgcgttctgttaccactgcgccagtgaagagtgagctagagcagagcagaacacaggca
gcaaaggagagccatatgcacagacattatgcagatccaatgttgaaccagctgccaagg
ccaccacaggagactggggaacgactgagcaaatacaaagaagaacacagacggatactc
caagaaagtattgaagttgctccttttacagctaaaataaaggcactggagggagagaga
gagaactactccagggtaacatccttatcttcaagtcccaaaagccattcagtaaaatac
gacaaagacgctgaacgttctgtgtcagaactgtataaaatgaaacattcagttccgcag
agtttgccacagagtaactatttcactaccctgtctaacagtgtagtaaatgaaccacca
agatcgtacccatcaaaggaagcttcaggtgcatatgttgataagcaagctaattgtcct
tcaacagcagctagtccccaggctctcccctcctacatttcttccctttcaaaacctcca
cctttaattaagcaccaaccagagagcgaaggctctacaagcaagatacctgagcagctt
ccacagtcggtgcagtctcactctgtaaattctttcagaagtgacagcaggagccctact
cagttgtcagtctcatcttcaaatacactccggagtatgcctgccttgcatagggcccct
gtgtttcaccctcctgtgcaccagagcctggagaagaaggagagcagctatagcagcctt
tcacctccaactctaacccccgttcaaccagttaatgctggtggtggcaaaatacaggag
ttgcagaaaccgccaactttagtacctgagcccaaggaagcccagactgtttacaagggc
acttctgagcagaatttatcagaaatgtggaagtctaataatgccccaaataatgaaaaa
gtagattggcacagtgaaagaatgagtggaaagtcgcagtccgctacagcatctgttatt
gtgcgtcctccttctagcacaaaatacgagaatgtaccagtaatgcagtctgcttccaaa
gatcgagttagtgagagatcttcagctgtgacaaatcaagcagattgcctgaaaacagcg
gaagccagggagactggaagagtcatcctgccaaatatgaactcagacagtgctcgcaca
cagtatgaaaagaaatttccagctgtctcgcaaggcagcattcctcgtgctgtcacccct
accacaactatcatctgcagcaccaaaacggatgtcaccgcatcagcagcaacgacgacc
agcgtgtcgagccgcgggagctctgaagtgacctactcagtgtcgagcgcagtatcctgc
gcgccgctggagtgcgcggccccgagagcggccggccaggcggcagcacagccccaggag
tgcaaggtcagcacttcagctccggttgcatccgctgttggcagcacaggcagcgctgct
cagcccagctcgggattctccacctctaccgactttgtccatttgaagaagcacaaggca
gcattggctgcagctcagtttaaaagtagtaacaccactgagaccgagtccaactctgtg
aaaaatcagacattttcaacctctctctccctagacagtgctatcgtctgtaatacaata
aacaaagcgaactctgtaggcagtgggcagacttcccagacgagtcagccaaactaccac
actaaactgaaaaaggcttggctaacaaggcattcagaggaagataaaaacactaataaa
aaagagaattcagggaacagtgtttcagaaattattaagccgtgtactgtcaatttaata
gcttctacatcaaatgatttgcaaaataacatagatagcaaaatcttggcagataagttt
gtgaaggaagataagcacccaaggagaaaaggaaaacgaacttacgagtctggctctgaa
agtggtgactctgatgaaagtgagagcaagtcagagcaaaggactaaacggcagcccaag
ccaacttacaaaaagaaacaaaatgatttgcagaaaaaaaagggtgataccgaggaagaa
gtgaaaccaaatggtgttcttagcaggagcgccaaagaaaaaagcaagctgaagttacag
agcggcagtaacagcactggtatacctcgctcagtgttaaaagattggcgcaaagtaaag
aagctgaagcaaacgggagagtcctttttgcaggatgattcttgttctgaaataggacca
aatttgcaaaaatgcagagaatgtaggttaataagaagtaagaagggagaagaaccaact
cactcaccagtgttttgtagattttactactttcggcggttatcttttagtaagaatgga
gtggttaggatagatggtttctcctctcctgatcaatatgatgatgaagcactgagttta
tggacacatgaaaactatgaagatgatgaactggacctagaaacttctaaatacattcta
gatatcataggggataaattttgtcagttggtaacgtctgagaaaacagccatgtcctgg
gtgaaaaaagacgccaaaattgcatggaagagagcagtgagaggagtccgtgagatgtgt
gatgcatgtgaagccacattatttaacattcattgggtctgccaaaaatgtggatttgtg
gtctgcctagattgttacaaagcaaaggaaaggaaaagttctagagataaggagttgtat
gcctggatgaagtgtgtgaagggacagcctcatgatcacaagcacctgatgccaacacag
attattccaggctctgttttgacagatcttttagatgctatgcacaacattagagaaaaa
tttgaaatgaaatcccattgtcagtgcaccacaaagcagagcacacaagctgccaagctc
cctgcgatgaatggtgtgtctcaggttttgcagaatgtccttaaccacagtaataaaatt
tctctgtgcatgcctgagtctcaacagcagaatattcctcaaaagtccgagacaaatggt
aacacaagtccaaggagtgatgtgagcacagacagcaagttaacaccacctgaatcccag
tccccactgcattggttggctgatcttgcagagcaaaaagccagagaagaaaagaaagag
aacaaagaatgtccgtctggaaaacaatcgaaggaagagaaggaccaggataatttggaa
tccccaaactgtaaaagctcccctcctgcatcccagaacaatgagcagggctcaacctta
cgagatctgttaactacaacagcaggcaaactgcgtctgggttctacagatgctggcatt
gcttttgctccagtttactctacaggagcagcaagtggcaagagtggaaggactatgccg
aacattcttgacgacataattgcttcagtagtagaaaacaagattccaccaaatagagca
ccaaagataaatgtaaaatctgaaataaaagatgagccaaaggatgataaaaaatgtatt
caggatgactgcagtaaacggtacagtgatatccagtattcatggatctgtgataagcat
gttctgtggctcagagaccataaaaacagcaacaattggaagctcttcaaagagtgctgg
aagcaaggaaggcctgttttggtgtctggtatgcataagaaaatgaacttcagcctgtgg
aaagctgagtcaatcagtctggattttggaaaccagcaagctgatatcttgaattgcaag
gacagtatcatttcaaacaccaatgtcaaggagttctgggatggttttgaagatgtttca
aaacggcagaaagtaaaaaatggagaaacagctctactaaaactgaaagactggccttct
ggggaagatttcaaggctatgatgccagcaagatatgatgacttactaaaaagtttaccc
ttgcctgaatattgtagtccagaaggaaaactaaacttggcttctcatctgccaggattt
tttgtccgtccagatttgggacccagactgtgcagtgcatatggtgtggctgctactaaa
gaccatgacataggaaccacaaatctccatatcgaagtttctgatgtcgtgaacatcctt
gtttacgttggcatagccaaaggaaatggagtactttccaaatcaggagttttgaagaag
ttggaggaggaagatttggatgaccttttaaggaagcggttgaaagactcaagtgaatta
cctggtgctttatggcacatttatgctggcaaagatgctgacaagataagagagtttctg
caaaagatagcaaaggagcaaggcctagaagttttaccagagcatgatccaatccgtgat
cagagttggtatgtgaacaaaaaacttcgccaaagactttttgaagaatatggagtaaaa
acctgcacagttattcagttccttggtgatgctattattctaccagcaggagcacttcat
caggtgcaaaattttcacagctgcgttcaagtaactgaagactttgtgtctccagaacat
cttgtacagtcatttcacttaacgcaggagctgaggctgtcaaaggaagaaatcaattac
gatgataaactgcaggttaaaaatatcttgtatcacgcagttaaagaaatggtgagagct
ttgaagattcacgaaggtgaaatggaagatacggatgagaactga
DBGET
integrated database retrieval system
