KEGG   Corvus brachyrhynchos (American crow): 103623742
Entry
103623742         CDS       T08418                                 
Symbol
ERCC8
Name
(RefSeq) DNA excision repair protein ERCC-8 isoform X1
  KO
K10570  DNA excision repair protein ERCC-8
Organism
cbrc  Corvus brachyrhynchos (American crow)
Pathway
cbrc03420  Nucleotide excision repair
cbrc04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:cbrc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    103623742 (ERCC8)
  09124 Replication and repair
   03420 Nucleotide excision repair
    103623742 (ERCC8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cbrc04121]
    103623742 (ERCC8)
   03400 DNA repair and recombination proteins [BR:cbrc03400]
    103623742 (ERCC8)
Ubiquitin system [BR:cbrc04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     103623742 (ERCC8)
DNA repair and recombination proteins [BR:cbrc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      103623742 (ERCC8)
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_EML_2 EIF3I Beta-prop_RIG_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_EIPR1 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_EML ANAPC4_WD40 NBCH_WD40 WD_LRWD1 Beta-prop_IFT122_1st WDR90_beta-prop_4th WD40_RFWD3 Beta-prop_RIG_1st WD40_MABP1-WDR62_1st Beta-prop_WDR19_1st Beta-prop_Nup120_160 Beta-prop_IFT140_1st Beta-prop_LRRK2 Beta-prop_DCAF12 Beta-prop_WDR35_TULP_N Beta-prop_Vps41 eIF2A Beta-prop_SCAP Beta-prop_HPS5 Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 103623742
NCBI-ProteinID: XP_008641116
LinkDB
Position
Unknown
AA seq 341 aa
MLSGGSDGVIVLYDLENLSRKPSYTCKALFTVGRSHPDVHKFSVETVQWYPHDTGMFTSS
SFDKTLKIWDTNTLQPADIFHFEGTVYSHHMSPVATKHCLIAVGTKSPKVQLCDLKSGSS
SHILQGHRQEVLAVSWSPRHEYILATGSADGTVKLWDVRRASGCLSTLDQHNGEKSKASS
EAANTAHNGRVNGLCYTNDGLHLLTIGTDERMRLWNSSTGENTLVNYGKVCNESRKGLKF
AISCGCNPEFAFVPYGSTIAVYAVFTGELITMLRGHYSTVNCCVFQPHFQELYSGSKDCN
ILAWIPAPREPVPDDISEKSLPQQHLNPAYEDAWSSSDDEG
NT seq 1026 nt   +upstreamnt  +downstreamnt
atgttatctggtggatcagatggtgttattgtactttatgaccttgaaaacttgagcagg
aaaccaagttacacatgtaaagcactttttactgttggaaggagtcatcctgatgtacat
aaattcagtgtggagacagtccagtggtatcctcatgacacaggcatgtttacatccagc
tcatttgataaaaccttgaaaatatgggatacaaatactttacaacctgcagatatattt
cactttgagggaacagtctatagccatcacatgtctccagttgctacaaagcattgttta
atagcagttggtaccaaaagccctaaagtacagctctgtgacttgaagtctggatccagt
tctcacattctgcagggtcacaggcaggaagtgctggcagtttcttggtccccacgtcat
gaatatattttggcaacaggaagtgctgatggtacagtaaaattatgggatgtgaggaga
gcttctggatgtctgagtacacttgatcagcacaatggagaaaagtccaaagcatcttct
gaggcagcaaacactgctcacaatgggagagttaatggtttatgctatacgaatgatgga
cttcacctgttaaccattggtacagatgagcggatgcgactctggaacagctccactgga
gaaaacaccttagtgaactatgggaaagtctgtaatgaaagtaggaaaggactcaaattt
gccatctcttgtggttgtaatccagagtttgcctttgttccatatggaagtaccattgct
gtttatgcagttttcacaggagaactgataactatgcttagaggacattatagtactgtc
aactgctgtgtatttcaacctcattttcaggaactttatagtggtagcaaagactgcaat
atccttgcatggataccagctccacgagagccagttcctgatgatatttctgaaaagtct
ctgcctcaacaacatttaaatccagcatatgaagacgcatggagcagcagtgatgatgaa
ggctga

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