Corvus brachyrhynchos (American crow): 103623933
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Entry
103623933 CDS
T08418
Symbol
FAM188B
Name
(RefSeq) protein FAM188B isoform X2
KO
K22647
ubiquitin carboxyl-terminal hydrolase MINDY-3/4 [EC:
3.4.19.12
]
Organism
cbrc
Corvus brachyrhynchos (American crow)
Brite
KEGG Orthology (KO) [BR:
cbrc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cbrc04121
]
103623933 (FAM188B)
Enzymes [BR:
cbrc01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
103623933 (FAM188B)
Ubiquitin system [BR:
cbrc04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
MINDY
103623933 (FAM188B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MINDY-3_4_CD
Motif
Other DBs
NCBI-GeneID:
103623933
NCBI-ProteinID:
XP_008641335
LinkDB
All DBs
Position
Unknown
AA seq
756 aa
AA seq
DB search
MDNAFVEEVAASLVREFLSRKGLKKTITTMDRELPRSALSINNRNELRNVLHLHSLYKQN
KAKENPLKTLLEIITNYFLEHRGTSRSTGSSSALSAPQSKSSASHPSDLPDEDHGNANAL
DESKTQASRYDVENPLDKIPPPRKHQHRSEKCHPGTTHSSNLPCAWDKKLKDSQEDLKAA
PVSEELKSTGKEKPRPRAGLTAKGMMAGPVASPPEDLQKRRLSKRSTSISSTAQLRGEGH
LEEQDLSVPSTDFQESKASPTKSNAEFTSKTLPSSHTSSASEKPRNSPKDPDDFFSKLLS
ERERAKTEERKSLPSSGADSSEKSLKVSAPHRHSGAGREKKERSLKKTESRLSGHRKSPT
STGYKEDQMKEVLELVDVEDEETTGEVNKTPDLSTIYMLQIMSKAIDISLAKELKNLLFG
SSLCCFSEEWKIQSFTFNNIPQLKYGIVQKKGGPCGVLAAVQACVLQQLIFADSNRNRDP
RCLQPSEAHRTKCLSLALADILWRAGGHEKALVALPSGRQQFTPTGKYKADGILETLILH
SATRYEDLVLFLQQNIHQFEIGPYGCILLTVSVILSRSINLVRNDFDVLTNRLIGSHGYC
TQELVNLLLTGKAVSNVFNNVIELDSGNGNITILKGITSRSDIGLLSLFEHYDVCQVGCY
LKTPKFPIWLVCSESHFSVLFCLEKDLLSDWKTGRRFDLYYYDGLANQDEEIRLTVDTTQ
VCPENKENDLTPPLEHCIRTKWQGAVIDWNGTEPIL
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atggacaacgccttcgtggaagaagtggccgcatcactggtgagagagtttctcagtaga
aagggtttgaagaaaaccatcaccaccatggaccgggagcttccccgctctgcactcagc
atcaataacaggaatgagctccggaatgtcctgcacctgcactccttgtacaaacagaac
aaggcaaaggagaacccactgaaaacactgcttgaaattattactaattacttcctggag
caccgtgggacttccaggagcacgggttccagctctgctctgtcagctcctcagagtaag
agctcagcatcccacccatccgacctcccggatgaggaccatggcaatgccaatgcactg
gatgaaagcaaaactcaggcctccaggtatgatgttgagaatccactggataaaatccct
ccacccagaaaacatcagcacaggagtgaaaaatgccacccagggacaacccacagcagt
aacttaccctgtgcttgggacaagaagttaaaagacagtcaagaggatttaaaggcagct
ccggtttctgaggagctgaaatccacagggaaggagaagccaaggcccagggctggtctc
actgccaagggaatgatggctggaccagtagcaagtccaccagaggatctccaaaaaagg
aggctttccaaacgatccacgagcatcagcagcacagcacagctcaggggtgaaggacat
cttgaagaacaagacctgagtgtcccaagcactgattttcaggaaagcaaagcatctcca
acaaaatcaaatgcggaatttacatcaaaaactctgccaagctcacacaccagttctgcc
tcggaaaaaccaaggaacagccccaaagatccagatgactttttttccaagctgctgtct
gagagagagagggccaagactgaggaaagaaaatcacttccaagctctggtgcagacagc
agtgaaaaaagccttaaagtgagtgcccctcacagacattcgggggctgggagagaaaag
aaggagagatccctcaagaaaactgagagtcggttgtcaggtcacaggaagtctccaaca
tccactggctataaagaagaccagatgaaagaagtcctagaattggtcgatgttgaggat
gaagagacaactggagaagttaataagaccccagatctttcaacaatttatatgcttcaa
atcatgtcaaaggcaattgatatttctcttgcaaaagaattaaaaaatctgctgtttggt
tctagtctttgttgcttcagtgaagagtggaaaatccagagttttacatttaacaatatc
ccacagctaaaatacggcattgtgcagaaaaagggtggcccatgtggagttctggctgcg
gtccaagcctgtgtcctgcagcagctgatctttgcagacagcaacaggaacagagacccc
cgttgcctccagccctcagaagctcacaggaccaagtgcctctccttggctctcgctgac
attctgtggcgtgcggggggccacgagaaagccctcgtggcactgccatcaggaagacag
cagttcactcccacaggaaaatacaaggcagatggaatcctagaaactctaatacttcac
agtgccacaagatacgaggatctggtcctatttctacagcagaatatccaccagtttgaa
attggtccctatgggtgcatcctcctgactgtgtctgtcatcttatcaagatccatcaac
ctggtgcgcaatgacttcgatgtgctcacaaaccgcctgattggcagccatggctactgc
actcaggaattggtgaacttgcttttgactggcaaagctgtgtccaatgttttcaacaac
gtgatagagctggactctgggaatggcaacatcaccattctgaaaggcatcacgagtcgc
agtgacatcggtttgctgtccctctttgagcactatgatgtctgtcaggttggttgttac
ttgaagacccccaagttcccaatttggctggtttgcagtgaaagccacttcagtgtgctg
ttttgtttggaaaaggatttgctcagtgactggaaaacgggacggaggtttgatctctat
tactacgatggcttggccaaccaggatgaagagatacggttgacagtggatacaactcag
gtgtgccctgaaaataaagaaaatgatcttactcctccacttgagcactgtattaggaca
aagtggcaaggagctgtcatcgactggaacggcacggaacccatcttgtga
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