| Entry |
|
|---|
| Symbol |
TARBP1
|
|---|
| Name |
(RefSeq) probable methyltransferase TARBP1
|
|---|
| KO |
|
|---|
| Organism |
cbrc Corvus brachyrhynchos (American crow)
|
|---|
| Brite |
KEGG Orthology (KO) [BR:cbrc00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:cbrc03016]
103624087 (TARBP1)
03036 Chromosome and associated proteins [BR:cbrc03036]
103624087 (TARBP1)
Enzymes [BR:cbrc01000]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.34 tRNA (guanosine18-2'-O)-methyltransferase
103624087 (TARBP1)
Transfer RNA biogenesis [BR:cbrc03016]
Eukaryotic type
tRNA modification factors
Methyltransferases
103624087 (TARBP1)
Chromosome and associated proteins [BR:cbrc03036]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
103624087 (TARBP1)
|
|---|
| SSDB |
|
|---|
| Motif |
|
|---|
| Other DBs |
|
|---|
| LinkDB |
|
|---|
| Position |
Unknown
|
|---|
| AA seq |
1278 aa
METLEGNQIHVIKPVLPKLNSLYELAISGDKGCWLFHPSWHMCIYRRMFESENKTLTKEG
ILHFLELYETKHLPNSLGFSEFVIGPLMDALSESSLYSRTPGQSIGACPPLGIRLQKFLA
TYLTLLPEEEKGSFLLKFIQKMTSRHWCAVPILFLSMALASIPACKVLGAEGLHALRDVL
QCTMITHQILLRGAAQCYLLQTTMHLTDVEKVSFPEVSSFLLSLRPEESLRRDTLLWTEL
CSWLQVNDRCFRKSVTSDFEHQETSSLCQYVHSLVGEYLKTPASERENCFMPDWFEAKLV
STMILLAADVEQMKNKYSGKSNIEWIELEAFLNPLLDVLMKLGSNAYIPTVKTDKSLQLL
LKLLQTRWLKCSNSQDDEVLVFIWKSLVTPVESILEFVLRRLTTNELSTVGDLDRCDLYL
TVIPETVNLCLKVNWKKMPSIKNFLSSLINASIRNLQERNSEKEPKMKEQIRKVASMASL
AAVCEIIGGKPEAHLESLPSVDALKKFISFSQFNEVLKKPSHVEEKNSLCDETTSQGWGK
IVARYIRDQWICLRFVLNSFPTLPQGYEETSEMSFSTVERSKKTLQSALEALSILPSDQV
LPVFDCMKVLVPKLLDSSESLCIEAFDLAWKIISSLSNTQLIFWANLKAFAQFIFDTEVL
AVAASAKGQAYAKIKEIIFKLIDLSTTKTGVFNVVLSHCCQSWIFPTVDERSALTNAFLN
AGNYSELITEACVFGTVFRRDQRLIQDVHAFIENLGEKCAANVVTESTNRDDHYVRVCAV
KFLCLVDASNILHKAFMEDIFIKLLDKDELVSRSRTRYYANSLQHRVKNRVWQTLLVLLP
KLNQNFLCGALDRVFQAGFSNNQASVKYFIEWIIILSLHKYPQFLDKFWDCFCYDEEKLK
TSICTFLSVLAHFDIILQNTSEKKPALKKALIVVLQWCFNHNFSVRLYALVALKKIWGMC
RMLHVEEFEALTPVIESSLQQVENMHGTGNARRNWQRIQDHFFFATFHPVEDYSLETIFY
TLPRLSELAEDEWISLSKFDRFTDIPLPPAFQGYHSRRELRDLKPSDWSQQDMGSHSAEA
DSQPEWTDVQKKIIPWKNSTPSLDLETAFQDRAAKLGKSNSRLIVVASLIDKPTNLGGLC
RTSEIFGASALVVGSLHYIQDKQFQHLSVSAEQWLPLVEVKPSQLVDYLQQKKTEGYTII
GVEQTAKSFDLTEYCFPEKSLLLLGNEHEGIPANLIHHLDVCVEIPQQGIIRSLNVHVSG
ALLIWEYTRQQVIKQKQQ |
|---|
| NT seq |
3837 nt +upstreamnt +downstreamnt
atggaaactttggaaggaaaccagatccatgttataaagccagtattaccaaaactaaac
agtttatatgagcttgccatatcaggggataaaggttgttggctgtttcacccatcgtgg
catatgtgcatttatagacgaatgtttgagagtgagaataaaacactgacaaaggaaggc
attcttcattttctggagctttatgaaacaaagcatcttccaaattcacttggtttctca
gagtttgttattggaccactaatggatgccctttcagaaagttccctctacagcaggaca
ccaggtcaatcaataggagcttgtcctcctttgggaataaggttacagaagtttttggct
acttatctcactcttcttccagaagaagaaaaaggtagcttcctgttaaaatttattcag
aagatgacgagtaggcactggtgtgctgttcctattctgtttctttctatggctttggca
tctatccctgcatgtaaagtacttggtgctgaaggccttcatgctttaagagatgtcctc
cagtgtactatgattacacatcagattttgttgcgtggagctgctcagtgctatcttctt
caaacaactatgcatttgacagatgtggagaaagtgtccttcccagaagtttcaagcttt
cttctgtcccttagaccagaggagtccctaaggagagatactttgttgtggacagagctt
tgcagttggttgcaagtgaatgacaggtgcttcaggaagtctgtaacctctgattttgaa
catcaagagacatcatcattatgtcaatatgtacacagtcttgtgggagagtaccttaag
acacctgcatctgaaagagaaaattgctttatgcctgactggtttgaagctaagcttgtc
tccacaatgattctgttggctgctgatgtggagcagatgaagaataaatacagtggaaaa
agcaacatagagtggattgaactagaggctttcttgaaccctcttctggatgtcttgatg
aaacttggcagtaatgcttacataccaacagtgaaaacagataaaagccttcagcttctc
ttgaagttattgcagacccgttggttaaaatgttccaattcgcaagatgatgaagtactg
gtttttatctggaaatctcttgtgacacctgtggagagtattcttgaatttgttctccga
cggcttactaccaatgagttaagcactgttggcgacctggatcgttgtgatctgtacttg
actgtaattccagagacagtgaatttgtgcttgaaagtcaactggaagaaaatgccatct
atcaagaatttcctttcatccctgataaatgcgtctattcgtaatcttcaggagagaaat
tctgaaaaggagccaaagatgaaggaacaaatcagaaaagtagctagcatggcttcactt
gcagctgtttgtgagataataggtgggaagccggaagcgcacctggaatctctgccttct
gtggatgctctgaagaaattcatttccttttctcaattcaatgaagtattaaagaagcca
tctcatgttgaagaaaaaaatagcttatgcgatgaaacgacatctcaaggatgggggaaa
attgttgcacgctacattcgtgaccagtggatttgccttcgttttgttttaaattcattt
ccaacactgcctcagggttatgaagaaacttcagaaatgtcattttctacagtagaaagg
tcaaaaaaaactctacagtctgcattggaagccctgtctattcttccttcagaccaagtt
ttacctgtgttcgactgcatgaaagtccttgttcccaagcttctggactcatcagagtct
ctctgcatagaagcatttgatttggcttggaaaattatatcctctttgagcaacacacag
ctaatattttgggccaatctaaaagcatttgctcagttcatctttgatactgaggttcta
gctgttgctgcaagtgcaaagggtcaagcatatgccaaaataaaagagataattttcaag
ctcatagatctgtccactacaaagactggagtcttcaatgtagtccttagtcattgttgt
cagtcttggatatttcccactgttgatgagagaagtgccttgacaaatgctttcttaaat
gctggaaattatagtgaacttatcactgaggcttgtgtctttggaactgtgtttaggaga
gatcaaagactcattcaggatgtgcatgccttcatagaaaatcttggagaaaaatgtgca
gcaaatgttgttacagaaagtacaaatcgagatgatcactacgttcgtgtttgtgctgtt
aaatttctctgcttggtggacgcatcaaacatcttgcataaggcgtttatggaagacatt
ttcatcaagctacttgataaagatgaacttgtatccagatctagaacacgatattatgcc
aactctttacagcatagagttaaaaaccgggtatggcagacactcttagttcttctccca
aagcttaaccagaattttttgtgtggagctcttgacagagtttttcaggctggattcagt
aataatcaggcatctgtgaaatacttcatagagtggattatcatcttgagtctacataaa
tatccccaattccttgataaattctgggattgcttttgctatgatgaagaaaagcttaaa
acaagcatctgcacatttttatcagtgttggcccactttgacatcattcttcagaatacc
tcagagaagaagccagctttgaagaaagccctcatagttgttctgcagtggtgtttcaac
cataatttcagcgttcgactttatgcgttagtcgcccttaaaaaaatctggggtatgtgc
agaatgctgcatgtggaggaatttgaagctctgacaccagttattgaatctagccttcaa
caagtggaaaacatgcacggcacagggaacgccagaaggaattggcagcgaatccaagat
cacttcttctttgcaacatttcatccagttgaggattatagtctagagacgatattttat
actcttccccgcctttcggaactcgctgaagatgaatggatctccctctctaaatttgac
agattcactgacattcctttgccaccagcatttcaggggtaccattcccgaagggaactt
cgtgatctgaaaccaagtgactggtctcagcaagacatgggttcacattcagctgaagca
gacagccagccagagtggactgatgttcagaaaaagattataccctggaagaacagtact
cctagtttagacttggaaacggcttttcaggatcgtgctgctaaacttggcaaatcaaac
agcagattgattgtggtggcttcacttattgataaacctaccaatttaggaggtttgtgt
cgtacaagtgaaatatttggggcatctgcactagttgttggcagtcttcattatatacag
gataagcagtttcagcatctgagtgtttctgcagagcagtggctcccccttgttgaggtg
aaaccatctcagcttgttgattatttacagcagaagaaaacagaaggctacactattatt
ggtgtggagcagacagctaaaagttttgatcttacagaatattgcttcccagagaaatca
ctattattgctgggaaatgaacatgaaggaatcccagccaacctgattcaccacctggat
gtctgtgtggaaattcctcagcagggcatcattcggtcactcaatgttcatgtgagcgga
gctctgctgatctgggagtacacaaggcaacaagtcatcaagcaaaaacaacaataa |
|---|
