Corvus brachyrhynchos (American crow): 103624274
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Entry
103624274 CDS
T08418
Symbol
SAMHD1
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
cbrc
Corvus brachyrhynchos (American crow)
Pathway
cbrc03250
Viral life cycle - HIV-1
cbrc04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
cbrc00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
103624274 (SAMHD1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
103624274 (SAMHD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbrc03400
]
103624274 (SAMHD1)
DNA repair and recombination proteins [BR:
cbrc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
103624274 (SAMHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HD
PDEase_I
ODP
HD_assoc_2
Motif
Other DBs
NCBI-GeneID:
103624274
NCBI-ProteinID:
XP_017602429
LinkDB
All DBs
Position
Unknown
AA seq
595 aa
AA seq
DB search
SELLSIAENTRVNSRGSDENLLFCLKLLLLQLQERQRPRCFTEQEVLLRRGRVSPISLGE
IPGIDSCPAERLEVLACLTQLRQQHLEVMKVFNDPIHGHIEMHPLLVQIIDTPQFQRLRY
IKQLGGTYFVFPGASHNRFEHSLGVGYLAGYLVRTLKERQPELDITQRDILCVEIAGLCH
DLGHGPFSHMFDGRFIPLTRPDLKWKHETASVQMFEHLITSNKLEEVMKSYGLVLEEDML
FIKEQIGGPIDETSCVTSWPYRGRPKEKSFLYEIVANKKNGIDVDKWDYFARDCHHLGIP
NNFDYKRLLIFTRVCEVKNQKHICTRDKEVGNLYEMFHTRYCLHRRAYQHKTGNIIEIMI
TEAFQKADKFFEIRGSGGKVYHISTAMEDMEAYTKLTDCIYQEILHSSHPELEEAREILH
KVERRELYKFLGETRPESKKEIVKSNSLAESIANSKPEKDPPDVELKAENFIVDIINMDY
GMKEQNPIDNVHFYCKADPSKAVSISKEQVSKFLPIIFMEQVVRVYYKSQDPDVISAAKQ
YFIQWCMENDFTKPQDSDVVAPHLTPMKKTWNNLTDDEHTRASEPSCRQRLPFDE
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
agtgagcttttgagtattgctgagaacacaagagtgaactccaggggttctgacgagaac
ttacttttctgcctgaagttgctgctgctccagctccaggaacgacagcggccccgatgt
tttacagagcaggaggtgctgctcaggagaggccgggtgtctcccatctccctgggagaa
atcccgggcattgacagctgcccagctgagcgactggaagtgctggcgtgcctgacacag
ctgcgacagcagcacttggaggtgatgaaggtttttaacgatcctattcatgggcacatt
gaaatgcatcccctgcttgttcagatcattgacacccctcaattccagcgcctccggtac
atcaagcagctgggtggcacgtactttgtttttccaggagcctctcacaaccgctttgaa
cactccctaggggttggctaccttgcaggatatctggttcgtacactgaaggagagacaa
ccagaactggatataacccagcgagacatcctctgtgtagaaattgctgggctttgtcat
gatttgggtcatgggccattttcacacatgtttgatggaagatttattccactcactcgt
ccagatttgaagtggaagcatgaaactgcttctgttcaaatgtttgagcacttgatcact
tccaataaactagaagaagtcatgaagtcgtatggtcttgtcctggaagaagatatgctc
ttcatcaaggaacaaataggagggcctatagatgaaacttcctgtgtgacatcatggccc
taccgtggtcgaccaaaggagaaaagtttcctctatgagatagtagctaacaaaaaaaat
ggcattgacgttgacaagtgggattattttgcaagggactgccatcacctgggaatccca
aataattttgactataagcgattgcttatcttcactcgggtctgtgaagtgaaaaaccag
aagcacatctgtacccgtgacaaggaagttggaaatttgtacgagatgttccatacccgg
tattgcctgcaccggagagcatatcagcataagactggcaacatcattgaaataatgatt
acagaagcctttcaaaaagcagacaaattttttgaaataagaggctctggagggaaagtg
tatcacatttctacagcaatggaggacatggaagcctacactaaactaactgactgtatc
taccaggaaattctgcactcaagtcatccagaactggaggaggcacgagaaattttgcat
aaagtagaacgacgtgaattatacaagtttttaggagagactcgacctgaatcgaagaag
gaaattgtaaagagtaatagcctggcagaaagcattgctaattccaagccagagaaggac
cctccagatgtggagctaaaggctgagaatttcatagttgatattatcaacatggattat
ggaatgaaagaacagaatccaattgataacgttcatttctattgcaaggctgatccttcc
aaggcagtcagtatcagtaaagaacaggtttcaaagtttttaccgataatatttatggag
caggttgtccgggtttattacaaaagtcaggatccagatgttatttcagctgcaaaacag
tactttattcagtggtgtatggagaatgatttcaccaaaccacaggatagtgatgttgtt
gcccctcatctaactccaatgaagaaaacctggaataacctgacagatgatgaacacaca
agagcctcagaacccagctgcagacaaaggcttccttttgatgagtaa
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