KEGG   Corvus brachyrhynchos (American crow): 103624322
Entry
103624322         CDS       T08418                                 
Symbol
COL6A3
Name
(RefSeq) collagen alpha-3(VI) chain isoform X1
  KO
K06238  collagen type VI alpha
Organism
cbrc  Corvus brachyrhynchos (American crow)
Pathway
cbrc04510  Focal adhesion
cbrc04512  ECM-receptor interaction
cbrc04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:cbrc00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    103624322 (COL6A3)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    103624322 (COL6A3)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    103624322 (COL6A3)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cbrc04147]
    103624322 (COL6A3)
   00536 Glycosaminoglycan binding proteins [BR:cbrc00536]
    103624322 (COL6A3)
Exosome [BR:cbrc04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   103624322 (COL6A3)
Glycosaminoglycan binding proteins [BR:cbrc00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   103624322 (COL6A3)
 Hyaluronan
  Extracellular matrix or blood plasma proteins
   103624322 (COL6A3)
SSDB
Motif
Pfam: VWA VWA_2 Collagen Kunitz_BPTI VWA_3 fn3 Ig_J DUF6559
Other DBs
NCBI-GeneID: 103624322
NCBI-ProteinID: XP_017602589
LinkDB
Position
Unknown
AA seq 3213 aa
MRKHRHLPLVAMFCLLLSGFGSVGAQQQAAVKTVAVADIIFLVDSSWSVGKEHFQLVREF
LYDVVKALDVGGNDFRFALVQFSGNPHTEFQLNTYLSTRDVLSHIANMTYVGGGTEPGKG
LEYLIEKHLTKAAGSRASEGVPQVIIVLTDGRPRDDVALPSSVLNSARINLFAVSVQDPV
EGELQEVASEPLDTHRFNLENFTTLHGIVGDLVASVRSSMTPERAGAKGLVKDITAQESA
DLIFLIDGSNNIGGVNFPAIRDFLVNLIEILRVGAQQIHIGVVQYSDQPRTEFALNSYST
KADVLDAVKALSFRGGEEANTGAALEFVVENLFTQAGGSRIEEAVPQILVLISGGESSDD
IREGLLAVKQAGIFSFSIGVLNADSAELQQIATDGSFAYTALDIRNLDALRELLLPNIVG
VAQRLILLAAPTIVTEVIEVNKKDIVFLIDGSTALGAAPFNAIRDFVAKIVQRLEVGPDL
IQVAVAQYADTVKPEFYFNTHQTRKDVMANVRKMKLMGGTTLNTGSALDFVRNNFFTSAA
GCRIEEGVLPMLVLITGGKSRDAVDQAAAEMKRNRIVTLAIGSRNADLTELQEIAHERDF
VFNPNDFRLQFMQAILPEVLSPIRTLSGGVLVQEPSPVQVTKRDIIFLLDGSLNVGNANF
PFVRDFVATLVNYLDVGSDKIRVGLVQFSDTPKTEFSLYSYQTKSDIIQRLGQLRPKGGS
VLNTGSALNFVLSNHFTEAGGSRINEQVPQVLVLVMAGSSADPFLQVSNELARAGVLTFA
VGVRNADKAELEQIAFNPRMVYFMDDFSALAALPQELNKPITTYVSGGVEEVPLAPTESK
KDVLFLIDGSANLLGSFPAVRDFVHKVISDLNVGPDATRVAVAQFSDTIQVEFDFAEYPS
KQDMLVKVKRMKIKTGKQLNIGAALDEAIRRLFVKEAGSRIEEGVPQFLVLLVAGRSTDD
VEEPSDVLKQAGVVTFGIKAKNADPVQLERIVYAPQFLLNVESLQRISELQPSIVNLLRT
VQLQPTVVERGEKKDVVFLIDGSDGVRRGFPLLKTFVQRVVESLDIGRDRVRVAVAQYSN
TIQPEFLLDTHEDKADLISAIQQLKLMGGSPLNTGAALDYLIKNVFTVSSGSRIAEGVPQ
FLILLTADRSQDDVRRPSVVLKTSGTVPFGIGIGNADLTELQTISFLPDFAISVPDFSQL
DSVQQVVSNRVIRLTKQEIESLAPDLVFTSPSPAGVKRDIVFLVDGSRYAAQEFYLIRDL
IGRIVNNLDVGIDTTRISVVQFSEHPHVEFLLNTHSTKDEVQNAVRQLRSKGGQLVNVGE
ALEFVAKTIFTRPSGSRIEEGVPQFLVILSSRRSDDDFEYPSLQVKQVGVAPMMIAKNVD
TDEMIQISLSPEYIFQVSSFQELPSLEQKLLTPIETLTVDQIRRLLGDVQPPIDVSGDEK
DIVFLIDSSDSVRPDGLAHIRDFISRIVQQLEVGPNKVRIGVVQFSNGVFPEFYLKTHKS
KNAVLEAIRRLRLRGGSPLNAGKALDFVVKNYFIKSAGSRIEDGVPQHLVVILGDRSQDD
VNRPARVITSTNIKPLGVGARNVDRDQLQIITNDPGRVLVVQDFTGLSTLEQRVQNILDE
LPIPTTDSPGPFLPVGKKQADIVFLLDGSINLGRDNFQEVLQFVYSVVDAIYRDGDSIQV
GLAQYNSDVTDEFFLKDHSTKAQILDAISKVIYKGGRVANTGAAIKHIQERHFVKEAGSR
IDQRVPQIAFIVTGGKSTDDAPRASLEITQKGVKVFAVGVRNIDLKEVSQVASESAMSFR
VSTAQELSELNEQVLVTLEAAMEERLCPGTTDVTRDCDLDVIIGFDVSDVGPGQSIFSSQ
RGLESRVESVLNRLTQMQKISCTGNQAPNVRVAIMAQAQGGPVEGLDFSEYRPELLERFL
DMRTRGPYYLRADTLRSYLSKFRSSPSGSTKVIIHFTDGVDEPINQLEAASSTLHSEGVN
ALIFVGLDRVTNFDRLMQLEFGRGFTYNRPLRVNLLDLDFELAEQLDNIAERTCCKVPCK
CSGQRGDRGVPGPIGPKGVTGDLGYGGYPGDEGGPGERGPPGMNGTQGFQGCPGHRGTKG
SRGFPGEKGELGEMGLDGIDGEEGDKGLPGSSGEKGYSGRRGDKGVKGERGERGDRGLRG
DPGDSGADNTQRGSRGQKGEIGPMGDPGPAGLEGQDGGVGRKGMAGRRGPIGVKGTKGSP
GQAGPAGEQGMRGPQGPPGQVGTPGIRGEQGVPGPRAGSGPPGPAGERGRIGPLGRKGEP
GNPGLKGPNGQPGPRGEMGDDGRDGIGGPGPKGRKGERGFIGYAGPKGGPGDRGVAGGPG
PKGNRGRRGNAGQPGIPGQKGEIGYPGPSGLKGEKGESRDQCALVRNIKDKCPCCYGPKE
CPVFPTELAFAIDTSSGVVREVFNRMKQTVLRVVNNLTIAESNCPRGARVALVTYNNEVT
TEIRFADARKKSSLLQQIQNFQATLTTKPRSLETAMSFVARNTFKRARSGFLMRKVAVFF
SNGDTRASPQLNDAVLKLYDAGVVPVFLTSRQDAVLARALEINNTAVGHAIVLPTSGSQL
NETIQRLLTCHICLDVCDPHPSCGIGGQRPAFRDRRAAPTDVDTDIAFILDSSESTTPLQ
FSEMRKYISHLVTNLEISSEPKVSQHHARVAVLQQAPYEHETNSSFPPVKTEFSLTDYAS
KEKIINYLHNQMTQLHGTRALGSAIEHTIAHVFESAPNPRDLKVIVLMMTGKVNKKELEH
LQRVVINAKCKGYFFVILGIGRKVNAKNIYSLASEPNDVFFKLVDKPGELHEEPLLRFGT
LLPSFIRSEFAFYLSPEIRKQCEWFQNGQQAQSQHPVLTGQKAVFVAPNATITQTFTAST
TVSATIKPVASTHARTTPASTTTQARATETTPASSVVRGNATAQGAAGATAHAKASGRAA
TNATATAAGGRRRHSAKTHDIQITDVTESSARLRWASPEPHNTFDVTVTLAHDHSLVQRQ
NLTGTEHVIRGLRSGQKYIVVITGYQKSQPKVTYTGSFSTKSPAQPQVSLANMMLNTEPL
EGPESDWPDPCLLDFDMGMQCKDYQIVWFFDSKHKFCSQGWYGGCGGNANRFETEAECNN
KCLKPSAAEKAMQQPPLEKRLSSVMDICRLQKDEGTCRNFVLKWYYDPETKSCARFWYGG
CGGNENRFNTQKECEKLCIPGTINPGVVTTIGT
NT seq 9642 nt   +upstreamnt  +downstreamnt
atgaggaaacatcgacatttgcccctcgtggcaatgttttgcctcctgctctcaggcttt
ggctcggttggtgcccagcagcaagcagctgtcaaaaccgttgccgtggctgatataata
tttctagtggattcctcctggagcgttgggaaggaacacttccaactcgttcgagagttt
ctgtatgatgttgtaaaagctttagatgtgggaggaaatgattttcgctttgccctggtc
cagttcagcggaaacccgcacacagagttccagttaaatacctacctctccacccgggac
gtcctgtcccatattgccaacatgacttacgtggggggaggcaccgagcctggaaaagga
ttagagtacctaatcgagaagcacctcactaaagctgctggaagcagagccagtgaaggc
gtgccccaggttattatagtgctaacagacggacggccccgggatgatgtggctctgccc
tcatctgtccttaactcggcccgtataaacctgtttgcggtcagcgttcaggacccagtg
gaaggggagttacaggaagtagcaagcgaacccctcgatacgcaccgcttcaacctagag
aattttaccactctccacggcatagttggagacttagtggcgagtgtccgctcctccatg
actccagaaagggctggagccaaaggactggttaaagacatcacagctcaagagtctgct
gaccttattttccttattgacggatcaaacaacatcggaggtgtcaattttccagccata
cgcgatttccttgtaaatttgattgaaatcctcagagttggagctcagcagatacacatt
ggggtggtgcagtatagtgatcaacccagaaccgagttcgctttgaacagctactccaca
aaagcggatgtcctggatgccgtgaaggcactcagcttccgcgggggcgaggaagcgaac
accggtgcggcactggagtttgtggtggagaacctcttcacccaggcaggaggcagcagg
atagaggaagcggtgcctcagattttagtgctgataagtggtggagagtctagtgatgat
atccgagagggcttgttagcggtgaagcaagctggtatattttcgtttagcattggggtc
ctgaatgctgacagtgcagagctgcagcagattgctactgatggaagcttcgcctatact
gccctggatatccgtaaccttgatgctcttcgagaattattactgcccaacattgttgga
gtggcccaaagactcattttgttagcggccccaaccattgtgactgaagttattgaagtg
aacaagaaggatatagtcttcctgatagatggttcaactgctttgggggctgcccccttt
aacgcaattcgtgatttcgttgccaaaattgtccaaaggctggaggttggacctgacctg
atccaagtggcggtggcacagtacgcagacactgtgaagccagagttttattttaacacc
caccagaccagaaaggatgtgatggccaatgtgaggaagatgaagctcatgggtggcacg
acactcaacactggctcagcgctggactttgtgaggaacaacttcttcaccagtgctgct
gggtgcaggatagaggaaggggtgctccccatgctggtgctcatcactgggggtaagtcc
agggatgctgttgaccaagccgcggcagagatgaaaaggaaccggatagtgacccttgcc
attgggtcgagaaacgccgacctgacagagcttcaagaaattgctcatgaaagagatttt
gtgttcaacccaaacgacttccgccttcagttcatgcaagccattcttcctgaagtgctg
tcacctatccggacactctctggaggagtgcttgtccaagagccatcaccagttcaagta
accaaaagggatatcatctttcttttggatggatcactcaacgttggaaatgccaacttc
ccctttgtgcgggactttgttgccaccctagttaactaccttgatgtcggcagtgacaaa
atccgagttggcttagtgcaatttagcgacactcccaaaaccgagttctccctgtactcc
taccaaaccaaatcagacataatccagcgtttggggcagctgaggcccaagggggggtca
gtgctgaacactggctccgcactgaactttgtgctctcgaatcatttcacggaggctggt
gggagcagaataaatgaacaagtgccccaggtcctagtcctggtgatggcagggagctct
gccgatcccttcctccaagtttccaatgaattagctcgggccggagtgctgacttttgct
gttggcgttaggaatgcggataaggcagaacttgaacagattgcctttaatccaagaatg
gtgtattttatggatgatttcagtgctctggcagctttaccccaggagttaaataagcct
ataacaacatatgttagtggaggtgtggaagaggttccactcgccccaacagaaagcaag
aaagatgttttattcctgattgatggctcagccaacctcttgggcagctttcctgccgtc
cgggattttgtacacaaagtaatttctgacctgaatgtgggtcccgatgccacgcgagtc
gctgtagctcagttcagtgacaccatccaagttgaatttgattttgctgaatacccatca
aagcaagacatgcttgtcaaagtgaaaaggatgaagattaaaactgggaagcaactgaac
attggagctgcacttgatgaagctatacggaggctgtttgtgaaggaagctggaagcagg
atcgaagaaggggttcctcagtttttggtcctccttgttgctggaagatcaaccgacgat
gtggaggagccatcagatgttctgaagcaagctggagttgtaacctttggtatcaaagcc
aaaaatgccgaccccgtacagctggaaaggattgtttacgccccgcagttccttctgaat
gttgaatccctccaacggatttcagagcttcagccaagcatagtcaacctgttgagaaca
gtccagcttcagccaacagtagttgagagaggtgagaagaaggatgtggtgtttctgatc
gatggctcggatggtgtcagaagaggtttccctctcctgaagacgtttgtccaaagagtt
gtcgagagcctggacattggccgtgacagggtgcgtgtggctgtcgcacagtacagcaac
accatacagcctgagttcttgctcgacacccacgaggacaaagcagatctcatcagcgcc
atccagcagctgaagctcatgggagggtctcctctgaacactggggcagccctcgactat
ctcatcaagaatgtattcacagtgtcaagtggcagcaggatagcggagggcgtcccgcag
ttcctgatcctgctgactgctgaccggtcccaggacgatgtcaggaggccctcagtggtc
ctgaagacgagtggcacggtgcccttcggcattgggatcggaaatgccgacctcacagag
ctgcagaccatttccttcctcccagattttgctatctctgtgcccgacttcagccagctg
gattcggtgcagcaggtcgtctccaacagagtcatccggctgaccaagcaagagatagag
tctcttgcccctgacctggtttttacatcacccagcccagcgggtgtgaagagggacatt
gtgttcctggttgatggctcccgctacgccgcccaggagttctacctcatccgtgacctc
atcgggaggatcgtgaacaacctggacgtgggcatcgacaccaccaggatttcggtggtc
cagttcagtgagcacccccatgtggagttcctgctcaacacccactccaccaaggacgag
gtgcagaatgccgtgaggcagctgcggtccaagggcggccagctggtgaacgtgggggag
gccctggagtttgtggccaagaccatcttcacccggccctccgggagccgcatagaggag
ggcgtcccgcagttcttggtcatcctctcctcccgcaggtccgacgatgactttgaatat
ccatccctccaagtcaagcaagtgggggtggcacctatgatgatagcaaagaatgtggat
actgatgagatgatacagatttcccttagtcctgaatatatattccaagtctccagcttc
caggaactgcccagcctcgagcagaagctgctgactccaattgaaaccctgactgtggac
caaatcaggcggctgctgggagatgtgcaacctcccatagatgtttctggagatgaaaag
gacatagtcttcctcattgacagctctgacagtgtcaggccggatgggcttgctcatatt
cgggatttcatcagcagaattgtccagcagctggaagtggggccaaacaaagtgcgtatt
ggggtggttcagtttagcaatggtgtcttccctgagttctacctgaagacccacaagtcc
aaaaacgctgtcctggaagccatccgccgcttgaggcttagaggtgggtcacccctgaat
gctggcaaagccctggacttcgtggtgaagaactacttcatcaagtctgcggggagcagg
atagaagatggagtgccccagcacctggtcgtcatccttggagaccggtcccaggatgat
gtaaacagacctgccagagtgatcacttccacaaacatcaaacctctgggtgttggagcc
aggaatgtggacagggaccagctgcagatcattaccaacgatcctgggcgcgtgcttgtg
gtacaggacttcacaggactctcgaccttagaacagagggtgcagaatattcttgatgag
ctcccgatacctacaacagactcacctggaccattcctacctgtaggtaaaaagcaggct
gatattgtgtttttgctggatggctccatcaatctggggagagataacttccaagaagtt
ctccagtttgtctactctgtggtggatgccatttacagggatggcgactctatccaggta
ggactggcccagtacaactcagatgtcaccgatgagtttttcctcaaggaccattccacc
aaagctcagattttagatgctatcagcaaagtcatctacaaaggtgggcgggtggcgaac
accggtgcggccatcaagcacatccaggagagacactttgtgaaggaggccggcagccgg
attgaccagagggtgccccagatcgccttcatcgtcacaggtgggaagtctacggatgat
gcgccaagggcctccttggaaatcacgcagaaaggcgtcaaggtgttcgcagtcggtgtg
agaaacatcgacctgaaggaagtcagccaggtggccagtgagagcgccatgagtttcaga
gtatccacagcccaggagctgtcagagctgaatgagcaggtcctggtcacgctggaagct
gccatggaggagagattgtgcccaggaacaacagatgtgacaagagattgtgacttagac
gtgataattggcttcgatgtcagtgatgttgggcccggtcaaagcatattcagctcccag
cgaggtctggagtcgagagtggagtctgtgctgaacaggctaacgcagatgcagaagatc
agctgcactggcaaccaggcacccaatgtcagagtggccatcatggcccaggcccagggg
ggacctgtggaggggctggacttctccgagtaccggcccgagctcttggagaggttcctg
gacatgcggacccgcgggccctattacctcagggcagatacactgaggtcctacctgagc
aaattccgatcctcgccctctggcagcaccaaggtcataatccattttactgatggtgta
gatgagccgataaatcagctggaggctgcttcatctactttacactcagaaggagtcaac
gctctcatctttgtcgggctggaccgagtgaccaactttgacagactgatgcagctggag
tttggccgtgggttcacctacaacagaccactcagagttaatctgctggacttggatttt
gagctggcagagcagcttgacaacatcgcagagaggacgtgctgcaaggtgccctgcaag
tgctcaggacagagaggggacagaggtgtgccaggccctataggaccaaagggtgtcaca
ggagatcttggctacggaggctaccctggtgatgaaggaggaccgggtgagcgtggacca
ccgggtatgaatgggacgcaaggtttccagggatgccccgggcacagaggaacaaagggt
tctcggggattcccaggagagaagggtgaactgggagaaatgggtctggatggcattgat
ggagaagagggagacaaggggttgcccggctcttctggagagaagggatattctggcagg
aggggagataagggagttaagggtgaacgaggagaacgaggtgaccgtgggctccgtgga
gatccgggagattcaggagctgataatactcaacggggctccagaggacaaaagggtgaa
attggaccaatgggagatccaggacctgcagggctggagggccaagatggtggagtcggg
aggaagggaatggcaggacgaagagggcccataggagttaagggcaccaagggctcgcct
ggtcaagcagggccagctggagaacaaggcatgcgagggccacagggtccacctggccag
gttggcacgccaggcatcagaggagagcagggtgtccctggacccagggctgggagtgga
cctccaggacctgcaggagaacgtggcaggattggtcccctgggaaggaagggtgaacct
ggaaatcctggactcaaagggccgaatggacagccaggcccacgaggagagatgggtgat
gatggacgagatggaattggtggcccgggtcctaaaggcaggaagggagaacgcggcttc
ataggttatgcagggccaaagggtggacctggtgaccgtggtgtcgctggaggccccggc
cccaaaggaaacagaggtcgcagaggaaatgcaggacaacctgggatacctggtcagaaa
ggagagattggatatcctgggccatctggccttaaaggcgagaaaggagaatccagagat
caatgtgcgctggtgcggaacatcaaagacaaatgcccttgctgctatggtcccaaggag
tgccctgtcttcccaactgagctggcctttgctattgacacctcctcgggcgtcgtgagg
gaggttttcaacaggatgaagcaaaccgtgctcagagtggtcaacaacttaaccatcgcc
gagagcaactgtccccggggggcacgggtggctctggtcacctacaacaacgaggtcacc
accgagatccgctttgctgatgccaggaagaaatccagcctcctccagcagatccaaaac
tttcaggcaaccctgaccacgaagccacgcagcctagaaactgccatgtccttcgtggcc
aggaataccttcaagcgtgcccgcagtggctttctgatgaggaaggtggctgtcttcttc
agcaacggggacacgagagcatccccacagctcaatgatgccgtgctgaagctctatgat
gccggggtcgtgcccgtgttcctcaccagcaggcaggatgcggttcttgccagagctctg
gagatcaacaacacagcggttggtcatgccattgttcttccaaccagcggcagtcagctg
aatgaaaccattcagaggctcttgacttgtcacatttgtttggatgtgtgtgacccccat
cccagctgcggtataggtggccagagacctgcattcagagacagaagggcagcccccaca
gatgtggacacggacatagcctttatcctggacagctctgagtccaccacccctctgcag
ttcagtgagatgaggaagtacatttcccaccttgtaactaacctggaaatcagctcagag
ccaaaagtatcccagcaccatgccagagtggccgttctccagcaagcaccttacgaacac
gaaaccaactcaagcttcccaccagtaaaaactgagttctcactaactgattatgcatcc
aaagagaagatcattaattacctccacaaccaaatgacccagctccatggcacgagggct
ctaggaagtgcaattgaacacacaatcgctcatgtttttgaaagtgcgccaaaccctcgg
gacctaaaagtcatagttctgatgatgacaggaaaagtgaacaaaaaagaattggagcac
ctgcagagggttgtcatcaatgcaaaatgcaaagggtacttctttgttatcttgggcatc
ggcaggaaggtgaatgccaagaatatctacagccttgccagcgagccaaacgatgtgttc
ttcaagctggtcgataagccaggagagctccatgaagagcccttgctgcgttttgggaca
ctgctgccatcctttatcagaagtgaatttgctttctacttgtctccagagataaggaaa
cagtgtgagtggttccagaatggtcagcaagcccagagccagcaccccgtgctcactggg
cagaaagcagtgtttgtggctcccaacgccaccatcacccagaccttcactgccagcacc
acggtcagcgcaaccatcaagccagtggcgagtacccatgccagaaccactcctgccagc
accacaacccaggccagagccaccgagaccaccccggccagctctgtggtccgggggaat
gccactgcccagggagcagccggtgccactgcccatgccaaagccagtggccgggccgcc
accaacgccacagccaccgcggccggtggcaggaggagacacagcgcaaagacccacgac
atccagatcacagatgtcaccgagagcagtgccaggctgcgctgggccagccccgagcca
cacaacacctttgatgtcactgtcactttggcccatgaccactcccttgtgcagaggcaa
aacctgactggcaccgaacacgtcatccgagggctcaggagtgggcaaaaatacatcgtc
gtcatcactggctaccagaaatcacagcccaaagtaacctacacagggtcattcagcaca
aagagcccggcgcagccccaggtgtccctggccaacatgatgctcaacaccgagccactg
gaggggcctgagagtgattggccagacccttgcttgctggactttgacatgggcatgcag
tgcaaggactatcagattgtgtggttctttgactccaaacacaagttctgcagccagggt
tggtatggtggctgtggaggtaatgccaatagatttgagaccgaagctgagtgcaataac
aaatgcttaaagccatcagcagctgagaaagccatgcagcagccaccccttgagaaaaga
ttatcatcagtcatggatatctgccggctgcagaaggacgagggcacctgcaggaacttt
gtgctgaagtggtactacgaccccgagaccaagagctgcgcccgcttctggtacggcggc
tgcggcggcaacgagaacaggttcaacacacagaaagaatgtgaaaaactctgcatccct
ggtaccatcaaccccggcgtggtgacgacgatagggacatag

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