Corvus brachyrhynchos (American crow): 103624332
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Entry
103624332 CDS
T08418
Symbol
DHX58
Name
(RefSeq) probable ATP-dependent RNA helicase DHX58
KO
K12649
ATP-dependent RNA helicase DHX58 [EC:
5.6.2.6
]
Organism
cbrc
Corvus brachyrhynchos (American crow)
Pathway
cbrc04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cbrc00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
103624332 (DHX58)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cbrc04054
]
103624332 (DHX58)
Enzymes [BR:
cbrc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
103624332 (DHX58)
Pattern recognition receptors [BR:
cbrc04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
103624332 (DHX58)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIG-I_C-RD
RIG-I_C
Helicase_C
ResIII
DEAD
YqzN_YkzM
TTRAP
Hydantoinase_B
OST48_N
Motif
Other DBs
NCBI-GeneID:
103624332
NCBI-ProteinID:
XP_008641791
LinkDB
All DBs
Position
Unknown
AA seq
633 aa
AA seq
DB search
RHLQSRPGGKVAVLVNKVHLVDQHTEKEFQALQDTFKVASISGDTSHKAFFACLVKENDV
IICTAQILQNALVSTEEDMHVELTDFSLLVIDECHHTHKDAVYNKIMLRYLQHKLSREQE
LPQVLGLTASPGTGGATSFEEAVEHILQICANLDTEKITSVQDEAQHLQSHVPQPKKQYD
LCQERVQDPFGEQLKKMMVQIQQYMEKPGLPWDFGTQIYEQRIVELEKRAAEMFCRKTRV
CALHLRKYNDALLINDTVRMIDAFQCLQQFYSAERDEKDPTEQFLIATFKENRARLQALA
GDQRYENPRLGQLEGILREHFEPLGASRGIVFTKTRQSAHSLLSWLQTTATLQHIRATVL
TGAGYSNQTRHMTQNEQQDVIKQFREGALNLLFSTSVAEEGLDIPECNIVVRYGLMTNEI
AMMQARGRARAENSVYSVLAKANSREVARELLNEDRVELMKRAIQAVQAMPEQEYNQKIQ
ELQRVAVASWLMKESRISERRQLHDPDAVRLYCVNCNMAVCHGSDIRTVEGMHHVNVNPE
FRLYYRVSSGKIQFQRTFRDWEPGCRIACSACSQDWGMEMLYRQVKLPILCIKNFVVETP
AEKRRYKKWSAVTFPIKAFDYLEYCADTHGLSF
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
cggcacctgcagagccggccgggcggaaaggtggccgtgcttgtcaacaaggtgcacctg
gtggaccagcacaccgagaaggagttccaggcactgcaggacaccttcaaggtggcatcc
atcagtggggacaccagccacaaagccttcttcgcctgcctggtgaaggagaacgatgtt
atcatctgcacagcccagatactgcagaacgccctggtcagcacggaggaggacatgcac
gtggaactgacagatttctcgctgctggtgatagacgagtgccaccacacgcacaaggac
gccgtctacaacaagatcatgctgagatacctccagcacaagctcagcagggagcaggag
ctgccacaggttctggggctgacggcgtcgcctggcactgggggggcaacgtccttcgag
gaggccgtagagcacatcctgcagatctgtgccaacctagacactgagaagatcacatcg
gtgcaggacgaggcgcagcacctgcagagccatgtcccccaacccaagaagcagtatgac
ctgtgccaggagcgagtgcaggacccctttggtgagcagctgaagaagatgatggtgcag
atccagcagtacatggagaagccgggtctcccatgggactttggcacgcagatttacgag
cagcgcatcgtggagctggagaagagagctgcagagatgttttgtcgcaagacccgggtg
tgcgccctgcacctgcgcaagtacaatgacgctctgctgatcaatgacaccgtgcggatg
attgacgccttccagtgcctccagcagttctacagcgctgagagggatgagaaggacccc
actgaacagttcctcattgccacattcaaggagaacagggcaaggctgcaggcacttgcc
ggggaccagcgctatgagaaccccaggctgggccagctggaggggatcctgcgtgagcac
tttgagcccctgggcgcttctcgtggcatcgtcttcaccaagacaaggcagagcgctcac
agcctgctcagctggctgcagaccacggccacgctccagcacatcagggccaccgtcctc
actggcgctggctacagcaaccagaccaggcacatgacacagaacgagcagcaggatgtg
atcaagcagttccgtgagggagccctcaacctgctcttctccaccagtgtggctgaggag
ggcctggacatccctgagtgcaacatcgtggtccgctatgggctgatgaccaatgagatc
gccatgatgcaggcccggggccgtgcccgtgctgagaacagtgtctactctgtccttgcc
aaagccaacagcagagaggtggcccgagagctgctcaacgaggaccgggtggagctcatg
aagagggcgattcaggcagtgcaagccatgcctgagcaggagtacaaccaaaagatccag
gagctgcagcgggtggccgtagccagctggctgatgaaggagtccaggatcagtgagcgg
cggcagctgcacgacccagatgctgttcgcctgtactgtgtcaactgcaacatggccgtg
tgccatggcagcgacatccgcacagtggagggcatgcaccatgtcaacgtcaaccccgaa
ttcaggctgtattacagagtttcctctgggaaaatacaattccagcgcactttcagggac
tgggagcctggctgccgtattgcctgcagcgcctgcagccaggactggggcatggagatg
ctgtaccggcaggtgaagctgcctatcctctgcatcaaaaactttgtggtggagacaccg
gcagagaagaggaggtacaagaagtggagcgctgtgacgttccccatcaaggcgtttgac
tacctggagtactgcgctgacacccatggcctgtccttctag
DBGET
integrated database retrieval system
