Corvus brachyrhynchos (American crow): 103624344
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Entry
103624344 CDS
T08418
Symbol
BARD1
Name
(RefSeq) BRCA1-associated RING domain protein 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
cbrc
Corvus brachyrhynchos (American crow)
Pathway
cbrc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cbrc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
103624344 (BARD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbrc03019
]
103624344 (BARD1)
04121 Ubiquitin system [BR:
cbrc04121
]
103624344 (BARD1)
03036 Chromosome and associated proteins [BR:
cbrc03036
]
103624344 (BARD1)
03400 DNA repair and recombination proteins [BR:
cbrc03400
]
103624344 (BARD1)
Messenger RNA biogenesis [BR:
cbrc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
103624344 (BARD1)
Ubiquitin system [BR:
cbrc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
103624344 (BARD1)
Chromosome and associated proteins [BR:
cbrc03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
103624344 (BARD1)
DNA repair and recombination proteins [BR:
cbrc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
103624344 (BARD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_6
Ank
Ank_4
Ank_2
Ank_5
Ank_3
BRCT_2
BRCT
zf-RING_5
zf-C3HC4_2
ANK_LRRK2
zf-C3HC4
NIBRIN_BRCT_II
zf-C3HC4_4
zf-RING_UBOX
Siva
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
103624344
NCBI-ProteinID:
XP_008641799
LinkDB
All DBs
Position
Unknown
AA seq
766 aa
AA seq
DB search
MAPPGPPGSHPRAALGRLERALSCSRCAGVLREPVSLGQCEHVFCLSCVGDCVGTECPVC
HVPAWVQDAQINRQLDNMIQLCSKLRQLLGADASDSAEVTSTPTDSDLGKKSKKEQIKMW
FSPRSRKIRCVVKRSQAETKSNDLGQDTSSVYDFFPSPPQEKPSKPTKRPTQRQRKNMKK
KHLADINKEWNLEKPEQKGVEEKIPKEKCVTICSQPVVLCTPEPESPEERPQQESVKEAD
SSNNTEDMEVLPQAESPKKKDSGEVVCSARDSKEKYCAAETTLSIEKAVMPLKRGRQQSR
LQGTPQSKRARRSERDVPGKSGRQANGLEESLQGSPISPATEHQTPVQISSSASNLTDTG
MKTRRSAALQVINSPSLSESPSTPSTSKTCSQVATPLSPFVLKSPGGNTIARRNYKGETL
LHVASIKGDLAAVEELLKNGADPNVKDNAGWTPLHEACNHGHREVVELLLQHRALVNTTG
YQNDSPLHDAARNGHVAIVELLLLHGASQDAVNIFGLRPVDYAESEKMKSVLMLPVKNES
FSLNQPSEALSSSQPRNGPLGVLGSNLSAEQQKLLNKLATVLKAQRCTEFNSRVTHLVIP
DVPMPSTVKCMMAVLTGCWVLKFEWVQACLQSCVREQEEKYEVQGGPQRGRLNREQLLPK
LFDGCYFYFLGSFKHHQKSDLLDLVKAAGGQVLVRQPKPDSDVTQTINTVAYHAEPTSDQ
RLCTQYVIYDVASKFQPEKIRQGKVWMAPSSWLIDCVMSFQLLPVK
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgcccgggccccccgggtcccacccccgcgccgcgctggggcggctggagagg
gcgctgagctgctcccgctgcgccggcgtcctgcgggagcccgtgtccctggggcagtgc
gagcacgtcttctgcctatcctgcgtgggtgactgtgttggcaccgagtgccccgtgtgc
cacgtgccagcctgggtgcaggacgcacagatcaaccggcagctggataacatgatccag
ctctgcagcaagctgcggcagctcctgggcgccgacgcctcagattcagcagaagttaca
tccacaccgactgactcagacttgggaaaaaagagcaagaaggaacagataaaaatgtgg
tttagtccaagaagcaggaagattcgatgtgttgtgaagaggagtcaggctgagactaaa
agcaatgaccttggtcaagacacatcttcagtttatgatttctttccttcccctcctcaa
gagaagccctccaagccgacaaaaagaccaacccagagacagaggaagaacatgaaaaag
aaacatctagcagacattaacaaagagtggaacttagagaaacctgagcagaaaggagtc
gaggagaagattcccaaggaaaagtgtgtgaccatctgcagtcagccagtagtgctgtgc
actccagaaccagagagtcctgaagaaagacctcagcaggagtctgtaaaggaagctgac
tccagcaacaatacagaagatatggaagttctaccacaggcagaatccccaaagaagaaa
gatagtggtgaggttgtgtgctctgcacgagatagcaaggaaaaatattgtgctgcagag
acaacactctcaatagaaaaagcagttatgcctttgaaacgtggaaggcagcaatccaga
cttcagggtactcctcagtctaaaagagcaaggagaagtgagagggatgttcctgggaag
tcaggcaggcaggccaatggcttagaggagtcactgcagggctcccccatctccccagcg
acggaacaccagacaccagttcagatttcttcctctgcatccaatctcactgacactgga
atgaagacaagaagatctgcagcccttcaagtgataaacagtccttcactttcagaatct
ccttctaccccatccacttccaagacttgcagccaagtagcaacaccactcagtcctttt
gtgttgaaatcccctggtggcaacacaattgccagaaggaattacaagggagagactttg
ctccatgttgcttccatcaagggtgacttagcagctgtggaggagctgctgaaaaacggg
gcagatcccaatgtcaaagataatgctggctggacaccactgcacgaggcgtgtaaccac
gggcacagggaggtggtggagctgctgctgcagcaccgggcgctggtgaacaccacgggc
taccagaacgactccccgctccacgacgctgccaggaacgggcacgtggccatcgtggag
ctgctgctcctgcacggcgcctcccaggatgcagttaatatatttggtctgcggcctgtg
gactatgcagaaagtgaaaagatgaaatctgtgctaatgttaccagtgaagaatgaatca
ttttcacttaaccagccctctgaggcactgagctccagccagccaagaaatggacctctt
ggtgtactggggagcaatcttagtgcggagcagcagaaattgctgaacaaattagcaaca
gtcctgaaggcccagaggtgcactgaatttaacagcagagtaactcatcttgttatcccc
gatgttccaatgccaagtactgtcaaatgcatgatggctgttctgactggatgttgggtc
ctcaagtttgaatgggtacaagcctgtctgcagagctgtgttcgagagcaagaagagaag
tacgaagtccaaggtggcccccagcgagggcggctcaaccgggagcagctgctgcctaag
ttgtttgatggatgctacttctattttttgggatctttcaaacatcaccagaagagtgat
ctgctggacctggtgaaagcagcaggaggccaggtcctggttaggcagcccaaaccagac
agtgatgtgacacagaccatcaacacagtggcctaccatgcagagcccacctctgaccag
aggctctgcacccaatatgtcatctatgacgtggcttccaagttccagccggagaagatc
cggcagggcaaggtgtggatggccccctccagctggctcatagactgtgtgatgtcattt
cagctcctgcctgtgaagtga
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integrated database retrieval system
