Corvus brachyrhynchos (American crow): 103624371
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Entry
103624371 CDS
T08418
Symbol
PDZRN3
Name
(RefSeq) E3 ubiquitin-protein ligase PDZRN3 isoform X1
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
cbrc
Corvus brachyrhynchos (American crow)
Brite
KEGG Orthology (KO) [BR:
cbrc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cbrc04121
]
103624371 (PDZRN3)
Enzymes [BR:
cbrc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103624371 (PDZRN3)
Ubiquitin system [BR:
cbrc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
103624371 (PDZRN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
103624371
NCBI-ProteinID:
XP_017602730
LinkDB
All DBs
Position
Unknown
AA seq
780 aa
AA seq
DB search
MGCSLCTLQKPEEQYKLLYEVCQVNGKDLSKATHEQAVEAFKTAKEPIVVQVLRRAPRAK
AFAPAHDPQLVDVATQTDITFEHIMALSKMGSPTPPIPVLDPYLLPEDHPSVHEYYDPND
YMGGIHQEMDRDELELEEVDLHRVNSQDKLGLTVCYRTDDEDDMGIYVSEIDPNSIAAKD
GRLREGDRIIQINGIEVQNREEAVALLSSEESKNISLLVARPEIQLDEGWMDDDRNDFLD
DLHMDMLEEQHHQAMQFTASMLQQKKHEEDGGTTDTATILSNQHEKDSGVGRTDDSTRND
ESSEQENNGDDHTTSSNTLGSQKKLTYSHDTLGSGDMQFSNESFISADCTDVDFLGIPVD
ECERFRELLELKCQVKSANPYSLYYHNSTLEMSKSDQESVDRELEMLNEELRNIELECLN
IVRAHKMQQLKEQYREPWMLHNSGFRNYNTSIDVRRHELSDITELPEKSDKDSSSAYNTG
ESCRSTPLTLEISPDNSLRRTAEGINCQGNEGTVAYNVSQKNLFAGSESHESSAGKCHAS
AKDPDLGKQLESKERKGSDGSKSPTHGQKPSGSYVSPYHHSPYKHAHIPAHAQHYQSYMQ
LIQQKSAVEYAQSQMSLVSMCKDLASGQSEPRMEWKVKVRSDGTRYITKRPVRDRLLRER
AIKIKEERSGMTTDDDAISEMKMGRYWSKEERKQHLVKAKEQRRRREFMMQSRLECLKEQ
QGAEEKKEMNIIELSHKKMMKKRNKKIFDNWMTIQELLTHGTKSPDGTRVYNSFLSVTTV
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgggatgcagtttgtgcactctgcagaagccagaagagcagtacaagttactgtatgaa
gtttgtcaggtcaatgggaaggatttatccaaagccacccatgagcaggcggtggaagca
ttcaaaacagccaaggagcccatcgtggtgcaggtgctgaggagggccccacgcgccaag
gccttcgccccggcccacgacccgcagctggtggatgtggccacccagaccgacatcacc
ttcgagcacatcatggccctcagcaagatgggctcgcccaccccacccatccccgtgctg
gacccctacctcttgcctgaagaccatccatccgtgcatgaatactatgacccaaatgac
tacatgggaggaattcatcaagaaatggaccgggatgagttggaattagaggaagtggat
ttacatagagtgaacagccaggacaagcttggccttactgtctgttacagaacagatgat
gaagatgacatgggtatttatgtgagtgagattgatcccaacagcatcgctgcgaaagac
gggcggctccgagaaggggatcgcatcatccagatcaatggcatcgaggtgcagaaccga
gaggaagctgtggcacttctctccagcgaggagagcaagaatatctccttacttgtggca
agaccagaaattcagctggatgaaggatggatggatgatgacagaaatgattttctggat
gacttgcacatggacatgttagaggaacagcaccaccaggcaatgcaatttactgccagc
atgcttcagcagaagaagcacgaggaagatggaggcaccacagacacagccactattttg
tccaaccagcacgagaaggacagtggtgtggggcgcacggatgacagcactcgcaacgat
gagagctctgagcaggagaacaatggggacgatcacaccacctcctccaacactttgggc
agccagaagaagctgacctacagccatgacaccctgggaagtggggacatgcagttcagc
aatgagtcgttcatctcagctgactgcaccgacgtcgacttcctcggcatccccgtggac
gagtgcgagcggttccgggagctgctggagctgaagtgccaggtgaagtctgccaacccc
tacagcctgtattaccataacagcaccctggagatgagcaaaagcgaccaagagagtgtt
gacagagagctggagatgctcaacgaggagctgcgcaacattgagctggagtgcctgaac
atcgtgagagcccacaaaatgcagcagctgaaggagcagtaccgggagccctggatgctg
cacaacagcggcttccgaaactacaacacgagcattgatgtccgcaggcacgagctctcg
gacatcaccgagctgcccgagaagtccgacaaggacagctcgagtgcctacaacacgggc
gagagctgccggagcactccgctcacgctggagatctcccctgacaattccctgcgcaga
actgcagaaggcattaactgtcaaggtaatgaggggacagtggcatataatgtctcccaa
aagaatttgtttgccggctcagaaagccatgaatccagcgctggtaaatgccacgcctcc
gctaaagatcctgacctcggcaagcagctggagagcaaggagagaaaaggcagtgatggc
agcaaaagccccactcacggtcagaaaccctcgggctcctacgtgtccccataccaccac
tctccctataaacacgctcacatccctgcccatgcccagcactaccagagctacatgcag
ctgatccagcagaaatccgctgtggaatatgcacagagccagatgagcctggtgagtatg
tgcaaggacttggcctcgggccagagcgagcccaggatggagtggaaagtgaaggtcagg
agcgacgggacacgctacatcaccaagaggccggtgagggacaggctgctgagggaacgg
gccataaagatcaaggaggagcgcagtgggatgaccacggatgacgatgccatcagtgag
atgaagatgggccgttactggagcaaggaggagaggaagcagcacttggtgaaagcaaag
gagcagaggaggcggcgggagttcatgatgcagagcaggttagagtgcttaaaggagcag
caaggtgcagaggagaagaaggagatgaacatcattgaactgagccacaaaaaaatgatg
aagaagagaaataaaaaaatatttgacaattggatgacaatccaagaactgctaacccat
ggaacaaaatcaccggacggcacgcgggtgtacaattccttcctgtcagtgactactgta
taa
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