Corvus brachyrhynchos (American crow): 103624408
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Entry
103624408 CDS
T08418
Name
(RefSeq) pre-mRNA-processing factor 39-like
KO
K13217
pre-mRNA-processing factor 39
Organism
cbrc
Corvus brachyrhynchos (American crow)
Brite
KEGG Orthology (KO) [BR:
cbrc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cbrc03041
]
103624408
Spliceosome [BR:
cbrc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
103624408
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
HAT_Syf1_CNRKL1_N
TPR_14
HAT_Syf1_CNRKL1_C
TPR_16
Motif
Other DBs
NCBI-GeneID:
103624408
NCBI-ProteinID:
XP_017602750
LinkDB
All DBs
Position
Unknown
AA seq
384 aa
AA seq
DB search
MTQKSHCLPKSHWVGTGGSRSDSPGHHWLPRCGAPAPVLTVALPVPPGRAQNLLGAARRA
FDAFFLHYPYCYGYWKKYADMERRLGSARRAEEVLERGLQSIPLSMDLWIHYISFLQSTL
DPALPETAQRIRGAFEAAVAAAGMDFRSDKLWESYVEWERERGDLRAVTAIYDRLLSMPT
QLYSHHWEKFKEHVLQNPPLAILSPEEARPRLRYPRNEDLDQEKIRELVISMRQQIYAQN
EAEVSKRWNFEDGVGGRGRAPVKPLERAQLRNWREYLDFEVAAGSHERSIVLFERCLIAC
ALYEEFWVKYTRYLESRTVPGARSVFQRACGFHLPRKPNIHLLWAAFEEKQGNVEEARSI
LRCFEAAVPGLAMVRLRRVSLATP
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgacccaaaaatcccattgcctgcctaaatcccactgggttgggactgggggctccaga
tcagacagtcctggccaccactggctcccccggtgcggagcccccgccccggttctgact
gtggctctcccggtgccgccgggccgtgcccagaacctgctgggagccgcgcgccgggcg
ttcgacgccttcttcctgcactacccctactgctacggctactggaagaagtacgcggac
atggagcggcgcctgggcagcgcccggcgcgccgaggaggtgctggagcggggtctccag
tccatcccgctgagcatggatttatggatccactacatctccttcctgcagtccacgctg
gacccggcgctgcccgagaccgcccagcgcatccgcggcgcgttcgaggcggccgtggcg
gcggccgggatggatttccgctcggacaagctctgggaatcgtacgtggagtgggagcgg
gagcgcggcgacctccgcgccgtcaccgccatctacgaccgcctgctgtccatgcccacg
cagctctacagccaccactgggagaagttcaaggagcacgtgctgcagaacccccccctg
gccatcctgtcccccgaggaggcccgcccgaggctcaggtacccccggaatgaggatctg
gaccaggagaagatccgggagctcgtgatctccatgaggcagcaaatctacgcccagaac
gaggccgaagtcagcaagcgctggaatttcgaggacggggtgggtggaaggggacgtgcc
cccgtgaagccgctggagcgggcgcagctgcggaactggcgcgagtacctggacttcgag
gtggccgcggggtcccacgagcgcagcatcgtcctgttcgagcgctgcctcatcgcctgc
gccctctacgaggagttctgggtcaagtacacgcgctacctggagtcccgcacggtgccg
ggcgcccgcagcgttttccagagggcctgcggcttccacctgccccgcaagcccaacatc
cacctgctctgggccgccttcgaggagaagcaagggaacgtggaggaggcccggagcatc
ctgcgctgcttcgaggcggcggtgccggggctggccatggtgcggctgcgccgggtgagc
ctggcaacaccatga
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