KEGG   Corvus brachyrhynchos (American crow): 103624538
Entry
103624538         CDS       T08418                                 
Symbol
EXOSC1
Name
(RefSeq) exosome complex component CSL4 isoform X2
  KO
K07573  exosome complex component CSL4
Organism
cbrc  Corvus brachyrhynchos (American crow)
Pathway
cbrc03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cbrc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    103624538 (EXOSC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cbrc03019]
    103624538 (EXOSC1)
Messenger RNA biogenesis [BR:cbrc03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     103624538 (EXOSC1)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     103624538 (EXOSC1)
SSDB
Motif
Pfam: EXOSC1 ECR1_N RRP4_S1
Other DBs
NCBI-GeneID: 103624538
NCBI-ProteinID: XP_008642049
LinkDB
Position
Unknown
AA seq 195 aa
MAPPARYCVPGERLCSTEEATAGSGTYTRHGFIFSSLAGCLERRNEDSELPVVSVVRDSE
SQLLPNVGAVVTCKVCSINSRFAKVHILYVGSTPLKSTFRGTIRREDIRATEKDKVEVYK
SFRPSDIVLAKVISLGDAQSNYLLSTAENELGVVVARSEAGVQMVPISWCEMQCPRTHTK
EFRKVARVQPQFLQT
NT seq 588 nt   +upstreamnt  +downstreamnt
atggcgcctcccgcacgctactgcgtccctggtgagcggctgtgcagcacggaagaggcc
acggctggcagtgggacctacacccgtcatggtttcatcttctcctcgctggccggctgc
ctggagaggaggaatgaggacagcgagctgcccgtggtgtcggtggtgagagacagcgag
tcccagctcctgcccaacgtgggggccgtggtgacatgcaaggtctgcagcattaactcc
cgctttgccaaggtgcacatcttgtatgttggctccacaccactgaaatccaccttccga
gggaccatacggagagaagatatccgagccacggagaaggataaggtagaagtgtacaag
agcttccgccccagtgacatcgtcctggccaaagttatctccttgggggatgcgcagtcc
aactacctgctgagcacagcagagaatgagctgggcgtggtggtggcacgaagtgaggca
ggggtgcagatggtgcccatcagctggtgcgagatgcagtgcccacggacacacaccaag
gagttccgtaaggtggcccgggtgcagccccagttcctgcagacatga

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