Corvus brachyrhynchos (American crow): 103624569 Help Entry 103624569         CDS       T08418                                  Symbol PDCD11 Name (RefSeq) protein RRP5 homolog   KO K14792   rRNA biogenesis protein RRP5 Organism cbrc  Corvus brachyrhynchos (American crow) Brite KEGG Orthology (KO) [BR:cbrc00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03009 Ribosome biogenesis [BR:cbrc03009]     103624569 (PDCD11) Ribosome biogenesis [BR:cbrc03009]  Eukaryotic type   90S particles    Other 90S particles     103624569 (PDCD11) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  S1_RRP5 S1 HAT_Syf1_CNRKL1_N HAT_PRP39_N OB_RRP5_4th Suf HAT_PRP39_C TPR_14 OB_RRP5 HAT_Syf1_CNRKL1_C TPR_19 UTP6_C TPR_15 ARM_TT21_5th NRDE-2 TPR_CcmH_CycH TPR_12 ARM_TT21 TPR_16 TPR_Slam Motif Other DBs NCBI-GeneID:  103624569 NCBI-ProteinID:  XP_008642084 LinkDB All DBs Position Unknown AA seq 1831 aa AA seqDB search MASMEENFPRGGIQKKPAEGKTPKPKLERDNLFDVQHEEKPQKRKRSQKDQGTQKKFKAD KTAAAEDNIMNIGPLTIEVLSEGMLLLGCIKEVSDYELAISLPNGLSGFVPVTQISDAYS KLLTKQVAQGELLEELNSLPDMYSPGTLVRCIVTSIEKSADGRRSVKLSIDPKKVNKGLS STALAAGMLLSGSVLSVEDHGYLIDIGVTGTHAFLPHQKAKNYIKAVKKGPDLKIGQNLN CLIVEVKNEGRVVCLSIDRSEVAASVASERQNWALSNLLPGLVVKARVQKVAPLGMKLTF LSYFTGIVDFMHMDPEKSMSYSPDQVVKACVLSVHPTSRAVRLTLRPPFLHPGGAPRQLP GQRMGAVLEEAMVKAFYKQFGAVFELDDGTLAFARLKHLSKTRKSFKPGAFKEGCKHKCR IIDYSLMDEMCVVSLKHQIIEARFLQYQDIHTGDVVQGKVLSLKPIGMQVKVADGIRGLV PSLHLSDVILKQPEKKYNIGDEVKCRVLECSPGGKKLILTLKKSLVQSKLPVLSSYEDAK PGLITHGFVVCAREFGCIVKFYNDVKGLVPKNELGSDPISCPDKVFYEGQVNNIPLLCHV FECKREICILDFVLNSAPGPEDKWKCTPKEKQEVKYQTGEIVDVKILKKKDNGLEVSILE DEDNVVAWIPTLHLSDFVATSKLLWHCLQEGDVLPRVMYLSVKGEHIILSRKSAVISAVQ EEQVVRSFSEIQPDMLLTGYVRNVMPFGVFVEFPFGVTGLAPKVSMSDKFVTDTKDHFVV GQTVIAKVMSTDEEKQRVLLNLKVSECSSGDSAAESFALLNQYFKELKEIRDLLRRGDPS ICELVPGKGVHLVVQDVREDGSALFSGSSVTGLTVTATRYHLGDKNIAPGEKRKAIVLHV DALTSEVYVSLREELLKQRPKRRLRENSQHSAVVQHITEHFAIVSLLETGQLAAVPIACH FNDTFRFDSEKLGVGQTISITLKAVKENDHGVLPAVQGPAKKNVFVRVRNESETALEEVL PAVKHSLSPGDVVTGTVKSVKPTHVTVAIDDKLTGSIHASRILDEVPLGSFPTSTLKAGQ KVTARVIGGRDVNTHRYLPITHPHFTQSIPELSIRPSEKEGEFTAMLNLKEDSSLKKLGL YNVGQTVTCFVKKYNVLKNWLEVEVGPDIRGRVPHLLLSLNTKVLKHPEKSFKNGQAISA TVTGTDATETNLCLSLTGIQSLEQDTISVGMITKVTPHIGLTIALPGGKTGKVSIFHLSD TYTEDPLGKFKVGKIVRCYILSNENGKIQLSLRQSRLNPKVNSKVEDIEIVSIKDVKKGQ LVRGYVKSVTPSGVFFGLSTSLLGRILFQNVSPYFVQKHSLYEKYLPEGKLLTAKVLGVN RREKHIELSLLPEDTGMPSVLPESLGLPQYGAEEEKKEPDDEQREEPKLKTKRRRGNSES GQEAKPKKRKICPAEENDSGIEVYYREEDDQEEEATEKKSKVRKPGEAPRLQVSMGFTWD EDSAVDIPVLDQKGESSESEEEEDMQPKLKKQTKKEKELEKQKKEKELCRVEAALMDPSR QPQSADDFDRLVLGSPNSSILWLQYMAFHLQATEIEKARAVAERALKTISFREEQEKLNV WVALLNLENMYGTEETLMKVFERAVQYNEPLKVFQHLCDIYATSEKYKQAEELYHTMLKR FRQDKSVWLKYASFLLKQGQTEATHRLLERALKALPTKEHLDVISRFAQLEFHSGDTEHA KALFESTLSSYPKRTDIWSIYMDIMIKHGSQKEVRDIFERVIHLSLAPKKMKFFFKRYLD YEKKFGTAESVLGVKRAALEYVETKSSLADT NT seq 5496 nt NT seq  +upstreamnt  +downstreamnt atggcatccatggaagaaaactttcctcgagggggcatccagaaaaaacctgcagaggga aaaacacccaagccaaagttagagcgggacaatttgtttgatgttcaacatgaagaaaaa cctcagaaaagaaaaaggagccagaaggatcaaggaacgcagaaaaagttcaaggcagac aaaacagctgctgctgaagacaatattatgaatattggaccactcacaattgaggtgctc agtgaggggatgctgctccttggctgtataaaagaggtcagtgactatgagctcgccatc agtttgcccaacggcctctccggatttgtgccggtcacgcagatcagtgatgcctacagc aaactgcttaccaagcaggtggcccaaggagaactcctggaggagttgaattcgctccca gacatgtattctccagggacactggtcaggtgcatcgtgaccagtattgagaaaagtgcc gatggacgtcgcagtgtcaagttatcgattgaccccaagaaggtcaacaagggcctgagc tctacagcactagcagcaggcatgctgctctctggctctgtcttgagtgtggaagaccat ggctacctcatagatattggtgtcactgggactcatgctttcctgcctcatcagaaagcc aaaaattacatcaaagcagtcaagaaagggcctgacttgaaaataggccagaacctgaac tgcctcattgtggaagtgaagaatgaaggcagggtggtctgtttgtccattgaccgatca gaggtggctgcatccgttgcctcagagcgacagaactgggcactctctaatttattgcca gggctggtggtgaaagctcgagtgcagaaggtggctccacttgggatgaaactgacattt ctgtcttacttcactggcattgtggatttcatgcacatggacccagagaaatccatgagc tattctccagatcaagtggtgaaggcctgtgtgctgtctgtacaccccacgtcgagggcg gtgcggctgacgctgcgcccgcccttcctgcaccccgggggagccccacgccagctcccc ggccagcgcatgggggcagtgctggaggaggccatggtgaaagccttctacaagcagttt ggggctgtctttgagcttgatgatggcactcttgcatttgcacggttgaaacacctttca aaaaccagaaaatcctttaaacctggggcgtttaaggaaggttgcaaacataaatgtcgg atcatagactacagcctgatggatgagatgtgtgttgtatctctgaagcatcagattatt gaagcacggtttctgcaataccaggatatccacacgggtgatgtggtgcagggcaaagtg ctctctctaaaacccattgggatgcaggtgaaagtggctgatgggattagaggacttgtg ccatccctccatctctctgatgtgatcctgaagcagcctgagaagaagtacaacatagga gatgaagtcaagtgtcgggtccttgagtgcagtcctggaggaaagaagctgatccttact ctaaagaaaagtcttgtccaatcaaagcttccagtcctctccagttatgaagatgcaaag ccaggcctgatcacacatggctttgtagtgtgtgcaagggaatttggctgcattgtgaag ttctacaatgatgtcaaaggtctggtacccaagaatgaactgggctcagatcccatatct tgtccagataaagtcttctatgaaggccaggtaaataatatacctctgttgtgccatgtg tttgaatgcaaaagagaaatctgcattctggattttgttctcaactctgctcctggccct gaggacaaatggaaatgtactccaaaggagaaacaggaagtgaaatatcaaacaggagag atagttgatgtgaaaatcttgaagaagaaagataatgggttagaagtttccatcttagaa gatgaagacaatgtggtagcctggatccccacactgcacctgtctgactttgttgctacc tccaagctcctgtggcactgtcttcaagagggagatgtcctgcccagagttatgtatcta agtgtcaagggagagcacattatcttgagcagaaagtctgcagtgatttctgctgtacag gaggagcaagttgtgagaagcttctctgaaatccagcctgacatgctgttgactggttat gtgaggaatgtgatgccctttggagtgtttgtggagttcccttttggtgtgacaggactg gcacctaaagtgagcatgagtgacaagtttgtgacagacaccaaggaccactttgtggtt ggacagactgtgattgcaaaggtgatgagcactgatgaggagaagcagcgtgtgctcctc aatctgaaggtgtccgagtgcagctcaggggattctgctgcagagagctttgccctcctg aatcaatatttcaaggagctgaaagaaatcagggacttgttgagaagaggggaccccagc atttgtgagttggtgcctgggaagggagtgcatctggtcgtgcaggacgtgagggaggat ggctcagcactgttcagtggcagctctgtcacaggcttgactgtaactgccacccgctac catttgggagacaaaaatattgctcctggtgagaaaaggaaggccattgttcttcatgtg gatgccctcacatccgaggtgtatgtttctcttcgggaagaactgttaaagcaaagaccc aagcgacggctccgagagaactcccagcactctgcggtggtgcagcacatcacagagcac tttgccatcgtgtctctgctggaaacaggccagctggcagctgtccccatcgcctgccac ttcaacgacaccttccgcttcgactcagagaaactgggggtgggacagacaatctctata accttaaaagcagtgaaggagaatgaccacggggtcttgccagcagtacaaggcccagcc aagaagaatgtttttgtaagggtgaggaacgaatcggagacggcattagaggaggtgctt cctgctgtgaaacactcgctgtccccgggggatgttgttactggtaccgttaaatccgtc aaaccaacccacgtcactgtggctattgatgacaagctgacaggttcaatccatgcctct cggattctggatgaagtgcccctaggctcttttccaacttctactctgaaagctggacag aaagtgactgctcgagtcattggaggcagagatgtgaatactcacaggtacctgcctatt acccatccacacttcacacaatccattccagagctcagcattcgaccaagtgaaaaagaa ggggaattcacagcaatgctgaaccttaaagaagacagttccctcaagaaactcggactg tacaatgttggacagacagtcacctgttttgtaaagaagtataacgtgctcaaaaactgg ctggaggtagaagttggccctgacattcgaggaagagttcctcacctgctgctgtctctg aacaccaaggtcttaaaacatccagaaaagagctttaaaaatggccaggcaatatcagct acagtgactggaacagatgccactgaaacaaacctctgcttgtcactcacaggaattcag tcactggagcaggacaccatctctgtaggcatgataacaaaggtgactccacacattggt ttgaccattgcactgccaggtgggaagactggcaaagttagcatctttcacctgagtgat acttacacagaggaccctctggggaagttcaaagttggcaagattgtcaggtgttacatc ctctccaatgagaatggtaaaatccagctatctctccggcagtcccggctaaatccgaag gtgaacagcaaagtggaggatattgaaatagtgagtattaaggatgttaaaaaaggccag ctagtgagaggctatgtcaaatcggttactccatcaggtgtattctttggcttgtccact tctctcctgggtcgaatcctgttccagaatgtttccccgtactttgtacagaaacactcc ttatacgaaaagtacctgcctgagggaaaactgctcactgccaaagtgcttggtgtaaat agaagagaaaaacatattgagctctctctcctgcctgaggacactgggatgccaagtgtc ttgcctgaatccctaggcctaccacaatatggtgcagaggaagagaaaaaagagccagat gatgaacaaagagaagagcctaagctgaagacaaaaaggagaagaggaaattctgaaagt ggtcaggaggcaaagccaaagaagaggaagatctgcccagcagaggaaaatgacagtgga attgaggtgtattaccgtgaggaggatgaccaggaggaagaggcaactgaaaagaaatct aaggtgaggaagcctggtgaagctcccaggctgcaagtttccatgggcttcacctgggat gaagacagtgcagtggatatacctgtgctggatcagaaaggagagagctcggagagcgag gaggaggaggatatgcagcccaagctaaagaaacaaacaaagaaggagaaggagctggag aagcagaagaaggagaaggagctttgcagagtagaggcagctctaatggacccgagtcgg cagccccagtcagcagatgacttcgaccgcctggtgctgggcagtcccaacagctccatc ctctggctgcagtacatggctttccacctccaggctacagagattgagaaggccagagct gtggcagagagagcacttaaaacaatcagtttcagggaagaacaggagaagctgaatgtc tgggtagctctgctgaacttggagaacatgtatggtactgaggagacactgatgaaggtc tttgagagagcagttcaatacaatgaacctctgaaagtcttccagcatctgtgtgacatc tatgccacttctgagaagtacaagcaagcagaagaattgtaccacacgatgctgaagcgt ttccgtcaggacaaatccgtgtggctgaaatatgcctctttcctcctgaagcaaggccag actgaggctacacacaggctcctggagcgtgctctcaaggctctgcccaccaaagaacat ttggatgtcatttcaaggtttgcacagctggagttccattctggggacaccgaacatgcc aaggccctctttgagagcactctcagcagctatcccaagcgaacagacatttggtccatc tacatggacatcatgatcaagcatggcagccagaaggaagtacgggacatctttgagagg gtcatacacctgagcctggcaccaaagaagatgaaattcttcttcaaacgctacctggat tatgagaagaaatttggtacagcagaaagtgtcctgggtgttaaaagagcagcactggag tatgtggagaccaagagttcccttgctgacacctaa

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