Corvus brachyrhynchos (American crow): 103624676
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Entry
103624676 CDS
T08418
Symbol
CFAP43
Name
(RefSeq) cilia- and flagella-associated protein 43
KO
K24223
cilia- and flagella-associated protein 43
Organism
cbrc
Corvus brachyrhynchos (American crow)
Brite
KEGG Orthology (KO) [BR:
cbrc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cbrc03037
]
103624676 (CFAP43)
Cilium and associated proteins [BR:
cbrc03037
]
Motile cilia and associated proteins
Tether/Tether head (T/TH) complex
103624676 (CFAP43)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_EML
CFAP43_N
WD40_CDC20-Fz
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
WD40
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
103624676
NCBI-ProteinID:
XP_017581371
LinkDB
All DBs
Position
Unknown
AA seq
1686 aa
AA seq
DB search
MQIPLATTFPFAQFFEKCVFLVNVLTFSCSIFSWVQGFSDKNFGFINDQTVCYPCGNYIL
FLDIETKKTRALQCQTGQVGAFAANANSQVLAFSDRKLNPIIYIYTFPELSKPTELKGDA
QLDYTLLSFSFTGPYLASYSSIPEFVLSVWNWQENILLCSESQPGLTGTSLSFNPMNWQQ
LCFVAESSVTIWHVERCKDEHHLTRHPVELPDGHGTVTPHEDLFFPPSRNDDPYHGPDLP
VSAIAGLEGDEAETFVPRNCIKTSVHPTAHCWTATSEIYMGCKEGYVLAIDAEKYSVSVL
QQKAPPEFMQKIADVVSYVRREAQKKKGGKPNNLQKPVLLAMAFCNEGLYAAGSEGILIF
YHIKELQYEMKICADISQPISSLIFSPDYTSLLLVTDQGTVYSYKPAHSGEAVKLLDTSS
SCFLAADFLTPGNNYCVSVTVSGEVQVWSLEDGTFLSKLNLGIEATSMACCPSSNSVAVG
TQIGQICFVDVTKAEAPRVVHKIFLSKLPVLSLHYDQRGQFLIARATEGHIFILDARPSE
LFQVLGYIVLADEVLHLSVISDLKNDLVEVMVLLNVAEVQQARLEIFHLSSAIATDNDKY
VNEQGVFNTSDLKKEQYDLDCPLSSAVRLKDNIVYGYCTCAPFICKYHLSEESKLEDPSV
YSSEKRIPSNQFGSGLLCLSPNSQWLAAAAKDGVLFIYNTSTLDILAQKHCQSYQGGGIR
SMVFSLDGNFILVNGENDCALVCLKWKEIKETEVEQAALYWQSLLEILNKSTSDENSFLK
SMPEWKFDPESTSKSLPEAPLKSSTAEVAEEDGNVTNTNDMTWIGQKMQKVMREDTRRFA
NQKEEVQMGIKKLRETIQKMMHENEQVPDIEKLEHWEFNLDLEEQERVQEEAERDVARAR
KEIEMENLSYCYLQDLIKYDCWDVMCVKGRAVKCFHMDCQVSNYPLKERSKEELETLKKV
LHLKKTETADLKAQKKTLEVDSETALSEEEGEKAAEEVADNGASHCLNGSLSCQYGGDTS
TLYHQCDLHTREQKLHQTILLKDVIYKVKTAFNEEFDAIVQQKEQEIARVKEANMKIREI
LEQLELQVEVWEPVLTDDEMPERALTVQDSEIKAEKYLTQEEKEQLELLAKLERERRLAA
MDDERLRALDDMMGGVLEIRREDVLKMDIPPPSFISRPEDLWSEEEKKTFEDYEKKVKEL
NEDKEEYREFLRNEWKKLEDSIKETTQNFDESVCKLSEKKVKSQMVIYQEELKIVNLIYA
LLLDEELDTREAGLHKFLTKKKKEKVKSARKILTAKNGVEAYTGPYKDAIHEGKSLEHGF
IEEFADIPEDLLHELLQLYKHRPETPWTETLLDTANPYVKGSPEDCQDALSLLMKAMDEL
DSPEHMPSGLDQSVWERFCLARRNKMESEELGKWKALALEEMQAFLRRRVDENEKMKSEL
ENIFQELTWLKEEKMKLQQNLMVQFLLKQGQVELGSTEVPDYSDAVLINRSVVEELNSTL
AAQGEKKITAMVEFKDFSKGIIQLEWEHKKMKMQIQDLTEKARDIVILPISKDCQLFLTV
QNYDTHIAQHLAGMEQSLGVMDKLHKKNVKNHQKKVRELKKGIRLKEQANYELSLQLKEM
LISVSERMHIIEAADTRDISEKITKQRYQEILKQKYLRNFIREQEKQLTILQSEAESLKP
RILHIV
NT seq
5061 nt
NT seq
+upstream
nt +downstream
nt
atgcagatccctttggctacaacattcccttttgcacagttttttgagaaatgtgtgttt
ttggttaatgttctaacattcagttgctctattttcagttgggttcagggattctcagat
aagaactttggctttatcaatgatcaaactgtctgctatccttgtggtaattacatcctc
ttcctggacatcgaaacaaagaagacaagagcactgcagtgtcagactggccaggtggga
gcctttgcagcaaatgccaacagtcaagtgctggccttttctgaccggaagctcaatccc
atcatatacatctacacttttcctgaactgagtaaaccgacagaattaaaaggtgatgct
cagctggactataccttactttcatttagtttcacaggcccatatctggccagttactct
tcgatcccagaatttgttctttcagtatggaattggcaagaaaatatcctcctgtgcagt
gagtctcagccagggctaacagggacctctctgagttttaaccctatgaattggcagcag
ctgtgttttgttgctgagagctccgttaccatctggcacgttgagaggtgtaaggacgag
catcaccttacgcgacaccctgtggaactccccgatggtcatgggactgtgactcctcac
gaggatttgtttttcccaccttctcgtaatgatgatccataccatggccctgatttgcca
gtttcagccattgctggcctggaaggagatgaagcagaaacatttgtgcctagaaattgt
attaagacttctgtgcatcccactgcccactgctggactgcaacctcagaaatatacatg
ggctgtaaagaaggatatgttttggcaattgatgctgagaagtacagtgtttctgttctt
caacaaaaagctccacctgagttcatgcagaaaatagcggatgtggtgtcctatgttcgt
agagaagcgcagaaaaagaaaggtggcaaaccaaacaatctgcaaaaaccagttttactt
gccatggcattttgtaatgagggactgtatgcagctggaagtgagggcattttaatcttt
tatcacatcaaagagctgcagtatgagatgaaaatctgtgcagatatctcacagcccatt
tccagcctcatattttctcctgattacaccagtcttctgcttgtcactgaccaggggaca
gtctatagttacaaacctgcccatagtggagaagctgtcaaactcttggacacatccagc
agttgttttctggcagctgattttcttactccagggaacaactactgtgtgtctgtaaca
gtttcaggtgaagtacaagtttggtccttggaagatggaactttcctcagcaagctaaac
cttggtattgaggcaacttctatggcttgctgtccctcctccaacagtgttgctgtaggg
acccaaataggtcaaatctgttttgttgatgttaccaaagctgaagctccacgcgttgtt
cacaaaattttcctttccaaacttccagtgctgtctttgcattatgatcagaggggccag
ttcctcattgcaagagctacagaaggacacatctttattctagatgctcgtccatcagaa
ttattccaagttctgggatatatagtactggcagatgaagtgctccacctttctgtaatt
tctgacttaaagaatgacttagttgaagtgatggtacttcttaatgtagcagaggtccaa
caagcacgactggaaatttttcatctgtcttcagcaattgcaacagataatgataagtat
gtgaatgaacaaggagtgtttaacactagtgacttgaaaaaggagcaatatgatctggat
tgccctttgagctcagcagtcagattgaaggataacattgtgtatggctactgcacctgt
gcacctttcatctgtaaataccacctctctgaagagagtaagttggaagatccatcagta
tattcatcagaaaagaggattcctagcaatcagtttggatcaggtttgctctgtttatca
cccaacagccagtggctggcagcagcagccaaggatggtgttttgtttatctacaatact
tctactctggatatacttgctcaaaagcattgtcagtcgtatcaaggagggggaatcaga
tccatggtattctccctggatggcaatttcatcctagttaacggtgaaaatgattgtgcc
ctggtgtgtctgaagtggaaggagataaaagaaactgaagtagagcaagctgctctttac
tggcaatctcttcttgaaatactgaacaagtctacttcagatgaaaattcatttttaaaa
tctatgccagaatggaagtttgacccagagtccacatcaaaatcacttccagaggcacca
ctgaaatcttccactgcagaggtggcagaagaagatggaaacgtcacaaataccaacgac
atgacatggatagggcagaaaatgcagaaggttatgagagaagacactcggagatttgct
aaccagaaggaagaagtgcaaatgggaattaaaaagctgcgtgaaactattcagaaaatg
atgcatgaaaatgagcaggtgccagacattgagaaacttgagcactgggagttcaacctg
gatttagaagaacaggaacgagtgcaagaagaggctgaacgagacgtggccagggcgagg
aaggagattgagatggagaatttatcctactgctatttgcaagatttaatcaaatatgac
tgctgggatgttatgtgtgtaaaagggcgtgcagttaagtgcttccatatggattgtcaa
gtgagtaattatccactgaaggaacgtagtaaagaagagctggaaactttgaagaaagtt
cttcacttaaagaagactgagacagctgatcttaaggctcagaagaaaactcttgaggtt
gactctgagactgctttatctgaggaagaaggagagaaggcagcagaagaagtggctgac
aatggtgcatctcactgcctaaatggaagcctgagctgtcagtatggtggcgacacatct
accctataccaccaatgtgacttgcacaccagggagcagaaactccatcagacaatatta
ttgaaggatgtaatttacaaagtgaaaactgcttttaatgaggaatttgatgcaattgta
caacaaaaggagcaggagatagcacgagtgaaagaagcaaacatgaagatccgagaaatc
ctggaacagcttgaacttcaagtggaagtgtgggagccagtccttacagatgatgagatg
ccggagcgagcgctcactgttcaggattcagagattaaagctgagaaatacttgactcaa
gaggagaaagagcaattggaattgctggctaagcttgaacgggaaagacgccttgctgct
atggatgatgaaagactgcgtgctcttgatgacatgatgggtggagtgctagaaatcagg
agggaagacgttttgaaaatggatatccctccaccttcttttatatccagacctgaggat
ctttggagtgaagaagaaaagaaaacatttgaagactatgagaaaaaagtcaaggaactg
aatgaagacaaagaagagtatagagagtttctaagaaatgaatggaagaaacttgaagat
tccatcaaggaaacaacacaaaattttgatgagagtgtctgcaaactctctgaaaagaaa
gtgaaatcacagatggtcatctaccaggaagaactcaaaatagtcaatctcatttatgct
ttactgttggatgaagagttggacaccagagaagctggacttcataaattccttacaaaa
aagaagaaagaaaaagtcaagagtgcaagaaaaatcctgactgcaaaaaatggtgttgag
gcttacacaggcccctataaagacgcaatacatgaagggaagagcctggaacatggtttt
atagaggagtttgctgatatacctgaggatctccttcatgaacttctacaactttacaag
catcggccagagaccccatggactgaaaccctccttgacaccgccaacccctatgtgaag
ggatcacctgaggattgccaagatgcactttcccttttaatgaaagccatggatgaactg
gatagtcctgagcacatgcctagtggcttagaccagtctgtgtgggaacgtttttgtctg
gctagacgaaataaaatggagagtgaggagctggggaaatggaaggccctagcactggaa
gagatgcaggcctttctccggagaagagtggatgaaaatgagaagatgaagtcagaatta
gagaacattttccaagaactcacttggctgaaggaggaaaagatgaagcttcagcagaat
ttgatggtccagtttttgctaaaacaaggacaggtggaattgggaagtactgaggtccca
gactacagtgatgctgttctcattaacaggagtgttgttgaagaactgaatagcactctt
gcggctcaaggagaaaaaaaaattactgccatggtagaatttaaagacttctctaaaggg
ataatacagctggaatgggaacacaagaaaatgaaaatgcagatacaagatctgacagag
aaggctcgggatattgtaatactacctatttcaaaagattgccagctattcctaactgtg
cagaactacgacacccacatcgctcagcacttagccgggatggagcagagtcttggtgtc
atggataagttgcacaagaagaatgtgaagaaccatcagaaaaaagttagagagctgaag
aagggcatccgtctaaaagagcaagcaaactacgagctcagcctgcagctgaaggaaatg
cttatctctgtgtcagaaaggatgcacatcattgaggcagctgacacacgggatatttct
gaaaagatcacaaagcagcgttaccaagagattttgaagcagaaatatctacggaacttt
ataagggaacaggaaaaacagcttacaattcttcagtcagaagctgaaagtctgaaacca
agaatactccatattgtttaa
DBGET
integrated database retrieval system
