Corvus brachyrhynchos (American crow): 103624681
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Entry
103624681 CDS
T08418
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 1 isoform X1
KO
K05034
solute carrier family 6 (neurotransmitter transporter, GABA) member 1
Organism
cbrc
Corvus brachyrhynchos (American crow)
Pathway
cbrc04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cbrc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
103624681
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cbrc02000
]
103624681
Transporters [BR:
cbrc02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
103624681
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
103624681
NCBI-ProteinID:
XP_008642199
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All DBs
Position
Unknown
AA seq
601 aa
AA seq
DB search
MGKMDNTSVELNSPSEVKQAALEEPEPISPEVVSTKKKKKKEIPDRGSWKGKFDFLLSCV
GYAIGLGNVWRFPYLCGKNGGGAFLIPYFLTLVFAGIPLFLLETALGQYTSVGGLGVWRL
APMFKGVGLAAMVLSFWLNIYYIVIIAWALYYLFNSFTADLPWQNCGNAWNTDHCFSNYS
LNDTTNLTSAVTEFWERNMHQMSGGLGEPGTIRWPLAGTLALAWLLVYFSIWKGVEWTGK
VVYFSATYPYFMLFILLFRGVTLPGAKEGILFYLTPDFRKLSDSEVWMDAATQIFFSYGL
GLGSLIALGSYNTFHNNVYRDSIIVCCINSTTSIFAGFVIFSIIGFMSHITKKSVSELAS
SGPGLAFLAYPQVVTQLPLSPLWSILFFSMLMMLGLDSQFCTVEGFITALLDEYPRVLRA
RKKIFIAVVCFISYLIGFSNITQGGIYVFKLFDYYSASGMCLLFLVFFETISISWCYGVN
RFYRNIEEMIGYKPCIWWKICWAFFTPLVCLGVFFFSVVEMTPLTLGKYVYPAWGQGIGW
LMALSSMVLIPGYMLYSFFTSTGTLRQRLQQMTQPRPEVHAQNNGLQPKTSLNGRISDAA
V
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagatggacaacacctccgtggagctgaattctccctctgaggtaaagcaggca
gccctggaggagccagagcccatcagccctgaggttgtgagcaccaagaagaagaagaag
aaggagatcccagacagaggttcctggaaggggaaatttgacttcttgctgtcctgtgtg
ggctatgctatcggtctgggcaacgtctggcgcttcccttatctctgtggcaagaatgga
ggaggggccttccttatcccttatttcctgacgctggtgtttgctgggattcctctcttc
ctgctggaaactgctctgggccagtatacctctgttggtggactgggagtctggagatta
gcacccatgttcaaaggtgtgggactggcagctatggttctgtccttctggctgaacatc
tactacattgtcatcattgcctgggctctctactatctcttcaactctttcactgcggac
ctgccgtggcagaactgcgggaacgcctggaacaccgaccactgcttctccaactactcc
ctgaacgacaccaccaacctcaccagcgctgtcaccgagttctgggagagaaacatgcac
cagatgtccgggggcctgggggagcctggcaccatccgctggcccctggctggcacactg
gccctggcctggctgctggtctacttctccatctggaagggtgtggagtggacgggcaag
gtggtgtatttctcagccacctacccctacttcatgcttttcatcctcttgttccgggga
gtcaccctgccaggagccaaggaggggatcctcttctacctcacgcctgacttcaggaag
ctttctgactctgaggtctggatggacgcagccactcagatcttcttctcctacggcctg
gggctgggctccctcattgctctggggagctacaacactttccacaacaacgtctacaga
gactccattattgtctgttgtataaactccaccacaagcatattcgcgggatttgtaatt
ttctctatcattggcttcatgtcacacatcacaaagaagtcggtgtcagagctggcctcc
tcaggtcctggactggctttcctcgcctacccgcaggttgtcacacagctgcccctgtcc
ccactctggtcaatcctcttcttctccatgctgatgatgctgggtctggacagtcagttc
tgcactgtggaagggttcattacagccctgctggatgaataccctcgagttctgagagcc
aggaagaagatcttcatcgcagtggtctgcttcatctcttacctcattggattctccaac
atcacgcagggcggcatttatgtcttcaagctgtttgattactactcagctagtggcatg
tgtcttctctttcttgtcttctttgagaccatctcaatttcttggtgttatggtgtgaac
aggttttacaggaacattgaagaaatgattggctacaagccttgcatctggtggaagatc
tgctgggccttcttcacacctcttgtctgcctgggtgtgttcttcttcagtgtggtggaa
atgactcctctgacactgggaaaatacgtctatcctgcgtggggacaaggcatcggctgg
ctcatggccctgtcctccatggttctgattccagggtacatgctctactctttcttcacc
tcaacagggactctccggcagcgtttgcagcagatgacacagcccaggccagaggtgcac
gctcagaacaacggcctccagccaaagacgtccttgaatgggaggatctcggatgctgcc
gtgtag
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