Corvus brachyrhynchos (American crow): 103624834
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Entry
103624834 CDS
T08418
Symbol
TRIP12
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12 isoform X4
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
cbrc
Corvus brachyrhynchos (American crow)
Pathway
cbrc04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cbrc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
103624834 (TRIP12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cbrc04121
]
103624834 (TRIP12)
Enzymes [BR:
cbrc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
103624834 (TRIP12)
Ubiquitin system [BR:
cbrc04121
]
Ubiquitin ligases (E3)
HECT type E3
103624834 (TRIP12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
WWE
UNC45-central
HEAT_2
HEAT_Maestro
Motif
Other DBs
NCBI-GeneID:
103624834
NCBI-ProteinID:
XP_008642375
LinkDB
All DBs
Position
Unknown
AA seq
2023 aa
AA seq
DB search
MSNRPNNNPGGSLRRSQRNTAGAQPQDDAVGGRGCSSSAVLIPQEDPERVNTSEKQKTGQ
VPKKDNSRGVKRSASPDYRRTNSPSSAKKPKALQHTETSSETNKPHTKSKRRHSDQEQPK
STQLPSTSKAHTRKGGAAGSSRSQKRKRTENLSCIKSGSSVESTGTEEKSAKVSKLASKS
VTSAKAGCSTITDSSSSASTSSSSSAVASASSTVPQGARVKQGKDQSKARRSRSASSPSP
RRSSRDKEPSKTGGSSKFDWAARFSPKVSLPKTKLSLPGSSKSETSKPGPSGLQAKLASL
RKSTKKRSESPPAELPSLRRSTRQKTTGSCASTSRRGSGLGKRGAAEARRQEKMADPDNN
QDGVNSSAARTDEPPQGAAASSSVAGAVGMTTSGESESDDSEMGRLQALLEARGLPPHLF
GPLGPRMSQLFHRTIGSGASSKAQQLLQGLQATDESQQLQAVIEMCQLLVMGNEETLGGF
PVKSVVPALITLLQMEHNFDIMNHACRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQCI
DVAEQALTALEMLSRRHSKAILQAGGLADCLLYLEFFSINAQRNALAIAANCCQSITPDE
FHFVADSLPLLTQRLTHQDKKSVESTCLCFARLVDNFQHEENLLQQVASKDLLTNIQQLL
VVTPPILSSGMFIMVVRMFSLMCSNCPTLAVQLMKQNIAETLHFLLCGASNGSCQEQIDL
VPRSPQELYELTSLICELMPCLPKEGIFAVDTMLKKGNAQNTDGAIWQWRDDRGLWHPYN
RIDSRIIEAAHQVGEDEISLSTLGRVYTIDFNSMQQINEDTGTARAIQRKPNPLANTNTS
GHSELKKDDARAQLMKEDPELAKSFIKTLFGVLYEVYSSSAGPAVRHKCLRAILRIIYFA
DAELLKDVLKNHAVSSHIASMLSSQDLKIVVGALQMAEILMQKLPDIFSVYFRREGVMHQ
VKNLAESEALLTSPPKVCTNGSGTLGTTTTISTGTATAASNAAADLGSPSLQHSREDSLD
LSPQGRLSDVLKRKRLPKRGPRRPKYSPPRDDDKVDNQAKSPTTTQSPKSSFLASLNPKT
WGRLSTQSNSNNIEPARTAGVSGLARAASKDTISNNREKIKGWIKEQAHKFVEHYFSSEN
MDGSNPALNVLQRLCTATEQLNLQVDGGTECLVEIRSIVSESDVSSFEIQHSGFVKQLLL
YLTSKSEKDAVSRDIRLKRFLHVFFSSPLPGEEPLGRLEPLENAPLLALVHKMNNCLSQM
EQFPVKVHDFPSGNGTGSSFSLNRGSQALKFFNTHQLKCQLQRHPDCANVKQWKGGPVKI
DPLALVQAIERYLVVRGYGRVREDDEDSDDDGSDEEIDESLAAQFLNSGNVRHRLQFYIG
DHLLPYNMTVYQAVRQYSLQAEEERESTDDESNPLGRAGIWTKTHTIWYKPVREDEDGNK
DCVGGKRGRAQTAPTKTSPRNSKKHDELWHDGVCPSVLNPLEIYLISTPPENITFEDPSL
DVILLLRVLHAISRYWYYLYDNAVCKEIIPTSEFINSKLTAKANRQLQDPLVIMTGNIPT
WLTELGKTCPFFFPFDTRQMLFYVTAFDRDRAMQRLLDTNPEINQSDSQDSRVAPRLDRK
KRTVNRDELLKQAESVMQDLGSSRAMLEIQYENEVGTGLGPTLEFYALVSQELQRADLGL
WRGEEVTLANPKGSQEGTKYIHNLQGLFALPFGRTAKPAHIAKVKMKFRFLGKLMAKAIM
DFRLVDLPLGLPFYKWMLRQETSLTSHDLFSIDPVVAKSIYHLEDIVRQKKRLEQDKTQT
KESLQYALEALTMNGCSVEDLGLDFTLPGFPNIELKKGGKDTPVTIHNLEEYLRLVIFWA
LNEGVARQFDSFRDGFESVFPLSHLQYFYPEELEQLLCGSKTDTWDAKTLMECCRPDHGY
THDSRAVKYLFEILSSFDSEQQRLFLQFVTGSPRLPVGGFRSLNPPLTIVRKTFESTENP
DDFLPSVMTCVNYLKLPDYSTIEIMREKLLIAAREGQQSFHLS
NT seq
6072 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaataacaatccaggggggtcactgcgacgttcacagaggaacact
gccggggcccagccacaagacgacgcagtaggaggaagaggctgtagttcatctgctgtt
ttaataccacaagaagatccggagagagtcaatacttcagaaaagcaaaaaacggggcaa
gtgcctaagaaagacaattctcgcggagttaaacgcagtgctagtccagattacaggagg
accaattctcctagctctgctaaaaaacccaaagcacttcaacatactgaaacttcctca
gaaactaacaagccacatactaaatctaagagaagacactcagaccaagagcagcccaag
tctacacaattgccatcaacaagcaaggctcacaccagaaagggtggagctgctggtagc
tcccgaagtcagaaaaggaaaaggacagagaatctgtcttgtataaagagtgggtcatca
gttgaatcaactggcactgaagaaaagtcagcaaaagtctccaagctggcttcaaaatcg
gtgacctcagccaaagctgggtgtagcaccatcaccgattcttcttcttcagcttccacc
tcctcctcctcttctgctgttgcctctgcttcttctactgttcctcagggtgccagagtg
aaacagggaaaggaccagagtaaggctagacgttcccgttccgcatccagccccagtcca
agaaggagtagcagggacaaagaaccgagtaaaacaggtggctcttcaaagtttgactgg
gctgctcgattcagcccaaaagtcagtctccctaaaacaaaactgtctctaccaggctct
tccaagtcggagacatcaaaacctggaccttcaggactacaggctaagctagcaagtcta
agaaaatctacaaagaagcgcagtgaatcaccacctgctgagctccccagtttacggcgg
agcacacggcaaaagaccacgggctcctgtgctagcaccagtcggcgaggctctggcctg
ggcaaaagaggagcagctgaagctcgccgacaggagaagatggctgatcctgacaacaac
caggatggagtcaactcttcagctgcacgaacagatgagcctccccagggagctgcagct
tctagttctgttgctggagctgtaggtatgacaacttctggagagagtgagtcagatgat
tctgagatgggaagactacaagctctattagaggctaggggtcttcctcctcacctgttt
ggccctcttggtcctcggatgtcgcagctcttccacaggacaattggaagtggagctagt
tctaaagctcaacagcttttacaaggtctccaagccactgatgaaagtcagcaactacag
gcagtgattgagatgtgccagctgttggttatggggaatgaagaaacgttaggaggattt
ccagtcaagagtgttgtaccagctttgataacactcctgcagatggagcacaactttgac
attatgaatcatgcatgtcgggccttaacatacatgatggaagcacttcccagatcatct
gctgtagtggtagatgcaattcctgtcttcttggaaaagctgcaagttatccagtgcatt
gatgtggcagagcaggcgcttacagccctggagatgttgtcacgcaggcacagtaaagcc
attctgcaggcaggtgggttggcagactgtttgctgtatctggaattcttcagtataaat
gcacaaaggaatgcactagctatcgctgccaactgctgccagagtataacgcctgatgag
tttcactttgtggcagactctttgccactgctaacacaaaggttaacccatcaggacaaa
aagtctgttgaaagcacttgtctctgttttgcacggctagtggacaacttccagcatgaa
gagaacttgctgcagcaggttgcttccaaggacttgttaacaaatatccagcagctcttg
gttgtgacacctcctatcctgagctcaggaatgttcatcatggtggtgcgcatgttctcc
ctgatgtgctccaactgccccacacttgcagtccagcttatgaagcaaaatattgcagaa
acgcttcacttcctcctttgtggagcctcaaatgggagttgtcaagaacaaattgacctt
gttccacgaagtcctcaagaactttatgaacttacttctcttatctgtgaactgatgcct
tgcctgccaaaagagggaatctttgctgttgatactatgctaaagaaaggaaatgcacaa
aatacggatggtgcaatatggcaatggcgagatgacaggggtctctggcatccgtataac
aggattgatagtcgaataatagaggcagctcatcaggttggtgaggatgagataagcctg
tctacacttgggcgtgtctatactattgattttaactctatgcagcaaataaatgaggat
actggaacagcccgtgccattcagcgaaaaccaaaccctttagccaatacaaacactagt
ggacattcggaattgaagaaggatgatgctcgagcacagttaatgaaagaggacccagaa
ctggcaaaatcctttatcaaaacattgtttggtgttctttatgaagtatatagttcttca
gctggacctgctgttagacacaagtgccttagagcaattcttaggataatttattttgct
gatgctgaacttctgaaggatgtgctgaaaaaccatgctgtttcaagtcatattgcctcc
atgctgtcgagtcaagaccttaagatagtagttggagccctgcagatggcagagatttta
atgcaaaagttacctgacatttttagtgtttacttcagaagagaaggggtgatgcaccaa
gtgaaaaacttggcagagtctgaggctttgctaacaagcccaccaaaagtatgcactaat
ggatcaggaacgctgggtaccactacgacaataagtactgggacagccactgctgccagc
aatgcagctgcagatttgggctctcccagcttacagcacagccgggaggattccttggat
ctgagcccacagggacgactgagtgatgttctaaagagaaaaagactgccaaaacgaggg
ccaaggagaccaaaatattcccctccaagagatgatgacaaagtagacaatcaagctaaa
agccctacaactactcagtctcctaaatcttctttcttggcaagtttaaatcctaagaca
tggggaagattaagcacacaatccaacagtaataatatcgaaccagcacgaacagcagga
gtaagtggtcttgcaagggctgcttccaaggataccatttccaataacagagaaaaaatt
aagggctggattaaggagcaagcccataaatttgtagaacattactttagttctgaaaac
atggacggaagcaatcctgcactaaatgtattacagagactttgcactgcaactgaacaa
ctcaacctccaggtggatggtggaacagagtgccttgtagaaatccgtagcattgtctcg
gaatctgacgtctcctcatttgaaatccagcatagtgggtttgttaaacaactgctgctt
tacttgacatctaaaagtgaaaaagatgctgttagcagggatatcagattgaaaagattt
cttcatgtatttttttcctctccacttcctggagaagagccccttggaagattagagcca
ttagaaaatgcacctttgttggcattagtccataaaatgaataactgcctcagtcagatg
gaacagtttcctgttaaagtgcatgacttccctagtggaaatggaacagggagcagtttt
tctcttaacagaggatcgcaagctttaaaattcttcaatacacatcaattaaaatgccaa
ctgcaaagacatccagactgtgctaatgtgaaacagtggaaaggtggccctgtgaagatt
gatcctctggctttggtacaagccattgaaagataccttgtagttagaggctatggaaga
gttagagaagatgatgaagatagtgatgatgatgggtcagatgaagaaatagatgaatct
ttggctgctcaattcttaaattcagggaatgtgagacatagattgcagttttacattgga
gatcacttgctaccatacaatatgactgtatatcaagcagtcaggcagtacagtttgcaa
gctgaggaagagagggaatctacagatgatgaaagcaacccattgggaagagctgggatt
tggacaaaaacacacaccatttggtacaaacctgtgcgagaggatgaagatggtaataag
gactgtgttggtggtaaaagaggaagagcacaaactgctcccacaaaaacctcccctcga
aattctaaaaaacatgatgaattgtggcatgatggtgtatgcccttcggtattaaatcct
ctggaaatttacctcatatctactccacctgaaaatataacatttgaagacccctcacta
gatgttattcttcttttgagagttttacacgctatcagtcgatactggtattacttgtat
gataatgcagtctgcaaggagataattccaacctcagagtttatcaacagtaaactgaca
gcaaaagcaaacaggcagcttcaggaccctttggtaattatgacaggaaacatcccaact
tggctgacagaacttggaaaaacatgcccatttttctttccatttgatacccgccaaatg
ctgttttatgtgacagcctttgaccgcgatcgagccatgcaaagactactggatactaat
ccagaaatcaatcagtcggattctcaggatagcagagtggcaccgcgactggacaggaaa
aaacgcactgtgaacagagatgagctgttgaaacaggcagaatctgtgatgcaggatcta
ggcagttcaagagccatgttggaaatccagtatgagaatgaagttggcacaggcctaggc
cctacactagagttctatgcacttgtatctcaggaactacagagagcagacttaggcctt
tggaggggagaagaagtgactttagccaatccaaaaggaagccaggaaggtaccaagtac
attcataaccttcaaggcctttttgcacttccttttggtagaacagccaagccagctcac
attgcaaaagttaaaatgaagttccgctttctgggaaaactaatggccaaggcaatcatg
gacttcagactggtggaccttcctcttggacttcctttttataaatggatgctacgacag
gaaacttccttgacttcgcatgacttgttcagtattgatccagtagtagccaaatcaata
tatcaccttgaagatattgtaagacaaaagaaaagacttgaacaggataaaactcagacc
aaagaaagtctacagtatgcattggaggctctgactatgaatggctgctcagtggaagat
ctagggctggacttcacacttcctgggtttcccaatatagagctgaaaaaagggggaaaa
gatacaccggtcactatccacaatttagaggagtatctcagattagttatattctgggca
ctaaatgaaggtgttgccagacagtttgactccttcagagatggatttgagtcggtcttc
ccccttagtcatcttcagtacttctatcctgaggagttggagcagctcttgtgtggcagc
aagacagacacttgggatgcaaagactttaatggaatgttgcaggcctgatcacggttat
acccatgacagtcgagcagtgaagtatctctttgaaattctcagtagtttcgatagtgag
cagcaaagactgtttcttcagtttgtgacaggcagccccagactgcctgtaggaggtttc
cgaagtttgaatcctcccttgacgattgtacggaagacatttgagtccacagagaatccc
gatgatttcttaccctcagtaatgacttgtgtgaactatctcaaattgccggactattca
actattgagataatgcgtgaaaaactcttgatagctgcaagagaagggcagcagtcattc
catctttcctga
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integrated database retrieval system
