Corvus brachyrhynchos (American crow): 103624873
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Entry
103624873 CDS
T08418
Symbol
COL4A3
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-3(IV) chain
KO
K06237
collagen type IV alpha
Organism
cbrc
Corvus brachyrhynchos (American crow)
Pathway
cbrc04382
Cornified envelope formation
cbrc04510
Focal adhesion
cbrc04512
ECM-receptor interaction
cbrc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cbrc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
103624873 (COL4A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
103624873 (COL4A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
103624873 (COL4A3)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
103624873 (COL4A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cbrc04147
]
103624873 (COL4A3)
00536 Glycosaminoglycan binding proteins [BR:
cbrc00536
]
103624873 (COL4A3)
Exosome [BR:
cbrc04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
103624873 (COL4A3)
Glycosaminoglycan binding proteins [BR:
cbrc00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
103624873 (COL4A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
103624873
NCBI-ProteinID:
XP_017582015
LinkDB
All DBs
Position
Unknown
AA seq
1494 aa
AA seq
DB search
MPGLQGAQGAQGYPGELGPQGPPGPLGMPGKPGPPGPKGLMGLKVIGAKGRKGDTGLTGP
PGPPGTVIVTLTGPDNMTDLKGEKGEKGSRGPPGPMGFTGPVGDSQSEKGDRGEPGAQGK
PGKEGAPGPPGLPGQKGEQGRPGLAGRRGAKGMKGNTGPPGARGRMEYYDYVVGEKGDEG
PPGPPGPKGQHGMPGPQGPPGAAGRPGVSRPGLRGPPGFPGPKGAKGEKGQTGLCIVGPP
GLPGITGRPGSIGLPGPPGEPGRVIFGTGLPGLPGEPGCTGPPGPPGDTGMKGDDALVCT
DCSYILGIPGLPGSPGPRGQDGMPGREGTTGPKGSPGSPGTPGFPGAQGPPGFRGDQGSK
GSKGEPGYVHPEGPKGERGDPGVRGDKGRKGSSGFLGRPGSKGSKGSKGEEGLAGSKGDR
GLPGLPGRLGLPGEMGLPGLPGYGPQGVRGFKGSKGIPGPPGLPGEAGLKGETSRATPLP
ALPGPQGPHGLPGPPGVPGRVGARGQPGDPGHSGPTGDTGFPGLGFPGNPGPKGDKGLAG
GRGPPGREGKTGDPGRAGNLGQPGQKGDPGMVIPGEPGRLGSPGGHGSPGSKGEGGLPGL
PGLPGHPGHDGDDGLRGNRGSPGLPGDPGFPGKPAECLIGLPGLPGGQGATGPPGGRGLQ
GSKGNLGPPGLSIPGIYGKPGEPGLIGLQGNTGLPGPKGQSGRPGISGLPGARGDPGVMG
LLGIPGSPGMVGIPGNPGVRGSPGFPGIKGRKGFLGEKGEPGDKGFPGPSETLVGIGDKG
ERGLKGVQGRMGLRGEKGDVGVQGPPGVDGSEGMPGLPGAKGFMGLPGIPGGQGFSGAPG
EKGDMGIPGPKGQKGSPGFPGPSGDPGPPGYGGFPGDKGDPGYPSAGPPGEPGPKGDPGP
PGVFGSKGEKGSQGHPGLIGEPGPHGIRGETGGAGIPGLCGPPGDTGVKGCQGHPGQQGV
PGPPGAAGVPGKHGLVGERGTQGQDGMPGPPGVKGEPGNTSESLPYMXYSHFAGIKGDMG
LPGFPGPPGVKGHQGDQGPVGPPGLVGLPGFQGATGMAITGQKGNRGIPGAHGRPGAPGF
PGLPGLSTLSVKGSKGVRGADGIPGPRGPAGDVGPPGPKGIEGRSGYPGARGHPGFLGFP
GVKGEKGNQGPPGPQGAEGPRGPKGQHGPPGVSGKIYSIPGSKGPPGLPGTPGTPGDQGI
QGIPGLQGPKGVKGLPGSFGHPGHPGLPGPKGDRGFPGQRGQPGLIGFPGLQGLPGSPGT
ITAGPTRRGFIFTRHSQTTKIPSCPHGTSQIYVGYSLLFVQGNERAHGQDLGTAGSCLQR
FSTMPFLFCSTNDVCSFASRNDYSYWLSTAVVMPPDMAPISGRALEPHISRCVVCEGAAM
VIAVHSQTTVVPACPDGWMSLWKGFSFVMYTSAGSEASGQALASPGSCLEEFRAVPFIEC
HGRGTCNYYTNSYSFWLASLNPRRMFRRPVSQTLKAGQLENIISRCQVCMKRPI
NT seq
4485 nt
NT seq
+upstream
nt +downstream
nt
atgcctggtctccagggtgcccagggtgctcaaggatatcctggggaacttggaccacag
ggccctccaggacctttaggcatgccagggaaaccaggacctcctggacctaagggtctt
atgggactgaaagtaataggagccaaaggaagaaagggtgacactgggttaaccggaccc
cctgggcccccaggaactgttattgtgacgttaactggaccagacaacatgacggacttg
aaaggagaaaaaggagaaaaaggatcaagaggacccccagggccaatggggtttacaggg
ccagttggtgattctcagagtgaaaagggtgaccgaggagaaccaggagcacagggcaaa
cctggaaaagaaggtgctccaggtccacctggcttaccgggccaaaagggtgaacagggc
aggccaggactggctggaaggcgaggagctaagggcatgaaaggaaacactggtccacct
ggagctcgtggtcgaatggagtattatgattatgtggttggtgaaaaaggggatgaagga
ccccccggacctccaggaccaaaaggtcaacatggcatgcctggaccacagggtcctcct
ggagctgccggtagaccaggtgtgtcaagacctggtctgagaggtcccccaggatttcct
gggccaaaaggagctaaaggagagaaaggacaaactggcttgtgtattgtaggccctcca
ggactgcctggtattactggcaggcctggttctattggattaccaggtcctccaggagaa
ccaggtagagtaatatttggaactggcctaccaggacttcctggagagccagggtgtaca
ggacctccgggacctccaggagatactggcatgaaaggtgatgatgctcttgtgtgtact
gattgcagctatattttgggaatacctggtcttcctggttctcctgggcctcgtggtcag
gatggcatgcctggtagagaaggaacaacaggtccaaaaggttctccaggttctccagga
acaccagggtttccaggggctcaaggacctccaggttttagaggagatcaaggaagtaaa
ggatcaaaaggtgagccaggatatgtacatccagaagggccaaaaggtgagcgaggagat
ccaggagtcaggggagacaaaggaagaaaaggttcaagtggatttctgggaagacctggc
tctaaaggatccaagggttctaaaggtgaagagggattggctggatcaaaaggagatcga
ggactacctggattgcctggtagacttgggcttcctggagaaatggggcttcctggactg
ccagggtatggaccacaaggagtaagaggttttaaaggctctaaaggaatacctggacca
cctggattacctggagaagctggtctgaaaggagagaccagtagggcaactccattacct
gcattgccgggacctcaaggaccacatggtttgcctggacccccaggagtgcctggtagg
gttggagcaagaggtcagccaggtgatccaggacattcaggaccaacaggtgacacaggc
tttccaggacttgggtttcctggaaacccaggtccaaaaggagataaaggacttgcagga
ggcagagggccaccaggtcgtgaaggaaagactggagatccaggccgagctggaaaccta
ggacaaccaggacaaaagggtgacccaggcatggttattcctggagagccaggaagactg
ggttcaccaggaggccacggcagtcctggctcaaaaggtgaaggtggacttccaggactt
ccaggcctaccagggcatcctggacatgatggtgatgatggcctaagaggaaatcgtggc
tcacctggacttcctggagacccaggttttccagggaaacctgctgaatgtcttattggc
ctgccaggtttgccaggtggccagggagctacaggcccaccaggaggaagaggtttacaa
ggttcaaaaggaaacctaggtcctcctggtttgagtatcccgggaatctatggaaagcct
ggggaacctggattaataggtcttcagggaaatacgggattacctggtcccaagggacag
tctggaaggccaggaatctctggtttgccaggtgcaaggggagatccaggtgtaatggga
ctgttaggaattcctggatcccctggcatggttggaataccaggcaacccgggagtgaga
ggttctcccggtttcccaggaataaaaggaaggaaagggtttcttggagaaaaaggcgaa
ccaggtgataaaggttttcctggaccatctgagactttggttggtattggggacaaagga
gaacgaggtttaaaaggagttcaaggccgaatgggtctaaggggagaaaaaggagatgtt
ggtgtgcaaggtcccccgggtgttgatgggtctgaaggaatgcctggtctaccaggagcc
aaaggatttatgggtcttccagggattcctggaggacaaggattctcaggtgcaccagga
gaaaaaggggacatgggaattccaggtccaaaaggccagaaaggatctccaggctttcca
ggaccatcaggtgaccctggtcctccaggctatggtggctttccgggtgacaaaggagat
cctgggtacccatcagctgggcctccaggagagcctggtccaaagggagatccgggtccc
ccaggagtttttggcagcaaaggagaaaaaggctcccagggtcatccaggacttatagga
gaaccaggaccccatgggatcagaggggaaactggaggtgcaggaatcccaggcctgtgt
ggaccccctggagatactggtgttaaaggatgtcagggccacccaggacagcagggagtc
ccaggccctcctggtgctgctggagtccctggaaaacatggacttgttggtgaaaggggt
actcaaggtcaggatggtatgcctggtcccccaggagtaaagggagaaccaggtaacaca
agtgaaagccttccctacatgtaatattcacactttgcaggaatcaaaggggacatggga
ctgcctggttttcctgggcctccaggtgtgaaaggtcatcagggagatcaaggacctgtt
ggacctcctggcttagtggggttacctggatttcaaggtgccacaggcatggcaatcact
ggccagaaaggaaacagaggtattcctggtgcacatggaagaccaggtgctcctggtttt
ccgggccttcctggtctttccactctcagcgtgaaaggaagcaaaggtgtcagaggggcg
gatggcataccagggccgaggggcccagctggtgacgttggccctcctggtcccaaagga
atagaaggtcgatcaggctatcctggtgctagagggcaccctggatttcttggattccca
ggtgtaaaaggagaaaagggtaatcaaggacccccaggaccacaaggtgcagaagggcca
aggggaccaaagggccagcatggcccacctggagtttctgggaaaatatactccatccca
ggaagcaagggtcctccaggactgccaggaaccccaggaacaccaggtgatcaaggaatt
caagggattcctggactacaaggacctaaaggagtaaaaggtctaccaggaagttttggt
catccaggtcatccaggactgcctggtccaaaaggagacaggggatttccaggacaaaga
ggacaacctggactgattggctttccaggtttgcaggggttacctggatcaccaggtact
atcactgctggcccaacaagaagagggtttatttttacccggcacagtcagacaacaaag
attccttcgtgcccacatgggacatcccagatctatgttggctattctctgcttttcgta
caaggaaatgaacgagcacatggacaagatcttggaacagctggtagctgcttgcagaga
ttcagcaccatgccattcttgttctgtagcaccaatgatgtttgtagctttgcttctcgc
aatgactactcatactggctgtccactgcagtagtaatgccaccagacatggcacccatt
tctggcagggcattagagccccacataagcaggtgtgtcgtctgtgaaggagctgcaatg
gtaatagcagttcacagccaaacaactgtagttcctgcatgtccagatggctggatgtct
ctctggaagggtttttcttttgttatgtacacaagtgctggctcagaagcttctggccaa
gcattggcatctcctggatcttgtctggaagaatttcgggccgtcccattcatagagtgc
catggcagggggacatgcaactactacacaaattcctacagcttctggttggcatcatta
aatccaagaagaatgttcaggagacctgtgtcacagactttgaaagcaggacaactagaa
aatatcatcagtcgttgtcaggtctgcatgaagagaccaatctaa
DBGET
integrated database retrieval system
