Corvus brachyrhynchos (American crow): 103625002
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Entry
103625002 CDS
T08418
Symbol
SLC8A1
Name
(RefSeq) sodium/calcium exchanger 1 isoform X1
KO
K05849
solute carrier family 8 (sodium/calcium exchanger)
Organism
cbrc
Corvus brachyrhynchos (American crow)
Pathway
cbrc04020
Calcium signaling pathway
cbrc04260
Cardiac muscle contraction
cbrc04261
Adrenergic signaling in cardiomyocytes
cbrc04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
cbrc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
103625002 (SLC8A1)
04020 Calcium signaling pathway
103625002 (SLC8A1)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
103625002 (SLC8A1)
04261 Adrenergic signaling in cardiomyocytes
103625002 (SLC8A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cbrc02000
]
103625002 (SLC8A1)
00536 Glycosaminoglycan binding proteins [BR:
cbrc00536
]
103625002 (SLC8A1)
Transporters [BR:
cbrc02000
]
Solute carrier family (SLC)
SLC8: Na+/Ca2+ exchanger
103625002 (SLC8A1)
Glycosaminoglycan binding proteins [BR:
cbrc00536
]
Heparan sulfate / Heparin
Others
103625002 (SLC8A1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Calx-beta
Na_Ca_ex_C
Na_Ca_ex
Motif
Other DBs
NCBI-GeneID:
103625002
NCBI-ProteinID:
XP_008642575
LinkDB
All DBs
Position
Unknown
AA seq
980 aa
AA seq
DB search
MFGTCLVEVAMSRVTHARTFPVSFPLLSLVLVLLFHAGGTHAESPSELPANDTEECAGSY
ICKKGVILPIWEPQDPSFGDKIARATVYFVAMVYMFLGVSIIADRFMSSIEVITSQEREI
TIKKPNGETSKTTVRIWNETVSNLTLMALGSSAPEILLSVIEVCGHGFTAGDLGPSTIVG
SAAFNMFVIIAICVYVVPDGEIRKIKHLRVFFVTAAWSIFAYTWLYIILSVSSPGIVEVW
EGLLTFFFFPICVVFAWIADRRLLFYKYVYKKYRAGKQRGMIIEHEGDRPSSKADIEMDG
KVANSHVENFLDGTLVLEVDEKDQDDEEARREMARILKELKQKHPDKEVEQLIELANYQV
LSQQQKSRAFYRIQATRLMTGAGNILKRHAADQARKAVSMHEVNSEVTENDPVSKLYFEQ
GTYQCLENCGTVALTIVRRGGDLTNTVYVDFRTEDGTANAGSDYEFTEGTVVFKPGETQK
EIRVGIIDDDIFEEDENFLVHLSNVRVSTEASDEGVLEASRVSTLACLGSPSTATVTIFD
DDHAGIFTFEEPVTHISESVGTMEVKVLRTSGARGNVIVPYKTIEGTAKGGGEDFEDTCG
ELEFQNDEIVKTISIKVIDDEEYEKNKTFYLEIGEPRLVEMSEKKALLLSELGGFTITGK
LWNGKPVFRKVQARDHPLPCTVVSIQEENEEKQPLTSKEEEXXXXXXXGRPVLGEHTKLE
IIIEESYEFKNTVDKLIKKTNLALVVGTNSWREQFIEAITVSAGEDDDDDECGEEKLPSC
FDYVMHFLTVFWKVLFAFVPPTDYWNGWACFVVSILMIGLLTAFIGDLASHFGCTIGLKD
SVTAVVFVALGTSVPDTFASKVAATQDQYADASIGNVTGSNAVNVFLGIGVAWSIAAIYH
AAHGQAFQVSPGTLAFSVTLFTIFAFISVGVLLYRRRPEIGGELGGPRTSKLLTSSLFIL
LWLLYIFFSSLEAYCHIKGF
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atgtttgggacctgcctggtggaagtggccatgtcacgggtaactcatgcacgcaccttc
ccagtgagcttccctctgctgagccttgtcctggtgctgctcttccatgcagggggcaca
cacgcggaaagccccagtgaactgcccgcgaacgacaccgaggagtgcgctggctcctac
atctgcaaaaagggtgtgattttaccaatatgggaaccccaggacccctcgtttggggac
aaaatcgcccgggcaacggtgtattttgtagcaatggtgtacatgttcctgggagtatcc
atcatagctgaccgcttcatgtcctccatcgaagtcattacgtcccaagagcgggaaata
accatcaagaagcccaatggcgagaccagcaaaaccactgtgaggatctggaacgagact
gtttccaacctcacgctgatggccttgggctcgtctgctccggagatcctcctgtctgtt
attgaggtgtgcggccatggcttcacggcgggggacttggggccaagcacgatcgtgggg
agtgctgcctttaacatgtttgtcatcattgcaatctgtgtgtacgtggtgccagatgga
gagataaggaagatcaagcacttgcgagtgttttttgtcacagcagcctggagcatcttt
gcctacacttggctttacattattttatctgtgtcttctcctgggattgtggaggtttgg
gaaggtttgctcaccttcttcttcttccccatctgtgtggtgtttgcctggatagctgac
aggaggctgttattttacaagtacgtctacaagaaataccgagctggcaagcagagaggg
atgatcatcgagcatgagggtgaccggccctcttccaaggctgacatcgagatggatgga
aaggttgctaattctcatgtggagaactttttggatgggacactagtgttggaggtggac
gagaaagaccaggatgacgaggaagccaggagggaaatggctcggatcctgaaggagctg
aaacaaaagcacccagacaaggaagttgaacagctcatagagttggccaactaccaggtc
ctgagccagcagcagaagagcagggctttttaccgcatccaggccactcggctcatgacc
ggcgcgggcaacatcttgaagagacatgctgcagaccaggcccgcaaagccgtcagcatg
cacgaggtcaacagcgaggtgaccgaaaatgatcccgtcagcaaactctactttgagcag
ggcacctaccagtgcttggagaactgtggcaccgtggccctgaccatcgtccgccgggga
ggagacctgaccaacacagtgtatgtcgacttccggacagaggacgggacggccaatgct
ggctctgactacgagttcactgaagggacagtggtcttcaagcctggagagacccagaag
gaaatccgtgttggcataatcgatgatgacatatttgaggaggatgagaacttcctggtc
catctcagcaacgtccgagtgagcaccgaggcctcagatgagggtgttcttgaggccagt
cgtgtctcaacactcgcctgcttgggatcaccatctactgccaccgtcaccatttttgac
gatgaccatgccggcatcttcaccttcgaggagccagtaacacacatcagtgaaagtgta
ggaaccatggaagtgaaagtgttgcgaacctctggagcacgaggaaatgttattgtgccc
tacaaaaccattgaaggcacggccaaaggtggaggagaggactttgaagacacctgcggg
gagctggagttccagaatgatgagatagtcaaaacgatatcgatcaaggtgatagatgat
gaggagtatgagaaaaacaagaccttctacctagagatcggggagccccggctggtggag
atgagtgagaagaaagccctgttgttgagtgagcttggtggcttcaccatcacagggaaa
ctctggaatggcaaacctgtcttcaggaaggtccaggctagagatcatcctcttccttgc
accgtggtctccatccaagaggagaatgaagaaaagcagccactgaccagcaaggaggag
gaagnnnnnnnnnnnnnnnnnnnngggcgcccagtcctgggggagcacaccaaactcgag
atcatcattgaggaatcctacgagttcaagaacacggtggacaagctcattaagaagacg
aacctggccctggtggttggcacaaacagctggagggagcagtttattgaggccattact
gtcagcgcgggggaagatgacgatgacgatgaatgtggggaggagaagctgccctcctgt
ttcgactatgtgatgcactttctgaccgtcttctggaaggtcctttttgccttcgtgccc
ccgacagactactggaatggctgggcttgcttcgttgtctccatcctcatgattggcctc
ctgacagctttcattggtgacctggcatcccactttggctgcaccatcggcttgaaggac
tcagtcactgcagtcgtgttcgttgcactggggacatcggtgccagacacatttgccagc
aaagtagcagcaacgcaggaccagtacgcggacgcctccatcgggaacgtcactgggagc
aacgctgtgaatgttttcctgggcattggggtggcctggtccattgcagccatctaccac
gcggcgcacggacaagccttccaagtctcccctggcacgctggccttctccgtcaccctc
ttcaccatttttgcttttatcagtgtgggagtgctgctctaccggcggagacccgagatt
ggaggtgagctgggcgggccgcggacttccaagctgctcacgtcctcactctttatcctc
ctctggctcttgtacatattcttctcatctctggaagcctactgccacataaagggcttc
taa
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