Corvus brachyrhynchos (American crow): 103625030
Help
Entry
103625030 CDS
T08418
Symbol
ATG16L1
Name
(RefSeq) autophagy-related protein 16-1 isoform X4
KO
K17890
autophagy-related protein 16-1
Organism
cbrc
Corvus brachyrhynchos (American crow)
Pathway
cbrc04136
Autophagy - other
cbrc04140
Autophagy - animal
cbrc04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cbrc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
103625030 (ATG16L1)
04136 Autophagy - other
103625030 (ATG16L1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
103625030 (ATG16L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cbrc04131
]
103625030 (ATG16L1)
03029 Mitochondrial biogenesis [BR:
cbrc03029
]
103625030 (ATG16L1)
Membrane trafficking [BR:
cbrc04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
103625030 (ATG16L1)
Others
Specific organelles associated proteins
Auto phagosome
103625030 (ATG16L1)
Mitochondrial biogenesis [BR:
cbrc03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
103625030 (ATG16L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
Beta-prop_THOC3
WD40_Prp19
WD40_WDHD1_1st
ATG16
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
WDR55
WD40_Gbeta
Beta-prop_WDR3_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_Aladin
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF4
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_IFT122_1st
ANAPC4_WD40
NBCH_WD40
eIF2A
Beta-prop_IFT140_1st
Beta-prop_DCAF12
WD40_RFWD3
Beta-prop_ACSF4
Beta-prop_NWD2_C
Beta-prop_HPS5
Beta-prop_WDR19_1st
Ge1_WD40
Beta-prop_WDR41
Beta-prop_VPS8
Tricorn_2nd
CCDC93_CC
Beta-prop_SPT8
ZapB
CCDC39
FKBP15
INO80F
Fez1
DUF8181
HTH_6
Tricorn_N
Peptidase_M15_4
Lipoprotein_6
PALB2_WD40
AP5B1_middle
DUF6383
HEF_HK
V_ATPase_I
FUSC
PUMA_CC
WHD_CYT4
DUF2332
CC_Bre1
Phage_GPO
YabA
Motif
Other DBs
NCBI-GeneID:
103625030
NCBI-ProteinID:
XP_008642637
LinkDB
All DBs
Position
Unknown
AA seq
561 aa
AA seq
DB search
MQSRHESSPGHDGTWNDAQLQELAQLKIKHQEELTELHKKRGELAQSVIDLNNQMQQKDK
EMQMNEAKIAEYLQKISELETECQELRSKLQDLERANQTLKDEYDALQITFNALEEKLRK
TTEDNQELVSRWMAEKAQEANRLNAENEKDSRRRQARLQKELAEAAKEPLPVEPDDDIEV
LADETSDTAEETSPVPAVSRTSSKRLSQPAGGLLDSISNIFGLSESPLLGHQSSDTARRR
SVSSFPAPQDNVEPHPGASKEVRVPTTAICVFDAHDGEVNAVQFSPGSRLLATGGMDRRV
KLWEVLGDRCEPKGSLSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDNRLRHTLTG
HSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQCVMSGH
FDKKIRFWDIRTESIVKELELLGRITALDLNPERTELLTCSRDDLLKIIDLRVSAVKQTF
SAQGFKCGSDWTRVVFSPDGNYVAAGSADGALYVWNVLTGKLERTLAKHHSSSINAVAWS
PAGAHVVSVDKGNKAVLWSEF
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgcagagtagacatgagtccagcccaggacatgatggcacatggaacgatgcacagctg
caggaactggcccagctgaagataaagcaccaagaggagctgactgagctgcacaagaaa
cgtggcgagctggcccagtctgtaattgatctgaacaaccaaatgcagcagaaagacaag
gagatgcagatgaacgaagccaagattgcagagtatttgcaaaagatttctgaactggaa
acagagtgccaggaattgcgtagcaaactgcaagatcttgagcgagctaatcagacactg
aaagatgaatatgatgctctccagatcaccttcaatgccttggaggagaaactaaggaaa
actactgaagacaaccaggagctggtctcacgttggatggcagagaaagcacaagaagcc
aatcgtttgaatgcagaaaatgaaaaggattcaaggagacgccaggccaggctgcagaag
gagctggcagaagctgccaaagagcccttgcctgttgaaccggatgatgatatcgaagtg
cttgcggatgaaacctctgacacagctgaggaaacttctccggtgccagctgtcagccgg
acatccagtaagcgactctcccagccagctggaggccttctggactctatcagtaatatc
tttggtctgtctgagtctccccttttgggacatcagtcttctgatactgccaggaggcgt
tctgtgtcctcattccctgcaccccaggataatgtagagccacatccaggtgccagtaaa
gaagtgagagtgcccactactgccatatgtgtctttgatgcacatgatggggaggtgaat
gcagtgcagttcagccctggctcccggttactagcaacaggaggcatggaccggagggtt
aagctgtgggaagtcttgggagataggtgtgagcccaaaggttccctctctggcagtaat
gctgggattacaagcatagaatttgatagtgctggttcttacctcttagcagcttcaaat
gactttgccagcagaatctggacagttgatgacaatcgattacggcacaccctgacaggt
cacagtggtaaagtcctgtcagccaagttcttgctggacaatgcacgtattgtttcggga
agtcacgaccggaccctcaagctctgggacctccgcagcaaagtttgtataaaaacagtg
tttgcaggatctagctgcaatgacattgtgtgtactgagcagtgtgtaatgagtggacat
tttgataagaaaattcgtttctgggacatcaggactgaaagcatagtgaaagaactggag
ctgcttggaagaatcacagctctggacctgaatccagagcgaacagagcttctgacctgt
tcccgtgatgatctactcaagatcatcgatctgcgggtcagtgctgtcaagcagacgttc
agtgcccagggattcaaatgtggctctgactggacgagagttgtgttcagccctgatggt
aactatgtggctgctggctcagctgatggggccctctacgtttggaatgtgcttactggg
aaattggagaggacgcttgcaaagcatcacagttcttctatcaatgcagtcgcgtggtcg
ccagcgggtgcccacgtggtcagtgtggacaaaggaaacaaggctgtgctgtggtctgag
ttttga
DBGET
integrated database retrieval system
