Corvus brachyrhynchos (American crow): 103625573
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Entry
103625573 CDS
T08418
Symbol
IFIH1
Name
(RefSeq) interferon-induced helicase C domain-containing protein 1
KO
K12647
interferon-induced helicase C domain-containing protein 1 [EC:
5.6.2.6
]
Organism
cbrc
Corvus brachyrhynchos (American crow)
Pathway
cbrc04622
RIG-I-like receptor signaling pathway
cbrc05164
Influenza A
cbrc05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cbrc00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
103625573 (IFIH1)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
103625573 (IFIH1)
05168 Herpes simplex virus 1 infection
103625573 (IFIH1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cbrc04054
]
103625573 (IFIH1)
Enzymes [BR:
cbrc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
103625573 (IFIH1)
Pattern recognition receptors [BR:
cbrc04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
103625573 (IFIH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIG-I_C-RD
RIG-I_C
ResIII
DEAD
Helicase_C
CARD_2
CARD
SWI2_SNF2
DUF3638
WDR93
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
103625573
NCBI-ProteinID:
XP_008643235
LinkDB
All DBs
Position
Unknown
AA seq
965 aa
AA seq
DB search
MGETTSQGETFQQPQTPRKHLVAASACLGSSQRPKHKICCSLAACYANPSLSQLPSPAEE
AEHDLCVHLVQLLHGTLVDRMRTVQVAEKCLEMGIFQDEDMDRIQTVADNRGNRDGAREL
LSRIVQKKDWFSSFLVALRETQHEDLADDLSGNTGGTENKQNGMEKSTNEEAEVTSQPGY
LRADNLKQEENVDDSFSSENSVLETSIEKNSVVSDSDVSIGDGSVSNLNENLGQSCTTSD
SDEDEGERRASPEPDLTLRDYQMEVAKPALNGENIIICLPTGSGKTRVAVYITKDHLDKK
RRASEPGKVIVLVNKVPLVEQHLQTEFSPFLKRQYQVIGLSGDSQLKISFPEVVRRNDVI
ISTAQILENSLLNASKEDEEGVHLSDFSLIIIDECHHTQKEGVYNNIMRRYLKEKMKNKK
LAKENKPQIPQPQILGLTASPGVGGATSYSKAEEHILKICANLDACRIMTVEEHVSQLKN
QVKEPSKKTVIADDKKRDPFKERITEIMTEIQNYCQLHPKSEFGTQTYEQWVIREERRAA
KEEKRRERVCAEHLKKYNDALQINDTIRMVDAYNHLNNFYKEEKSKKTVRSDDDDDDDDD
DEPAVSKQDETDEFLMGLFHAKKNQLKELTRQPENENEKLIKLRNTLMEEFTKTEEPRGI
IFTKTRLSAFALSQWIKDNPKFEEVGIKAHYLIGSGHNSEMKPMTQNEQREVIDKFRRGN
VNLLIATTVAEEGLDIKECNIVIRYGLVTNEIAMLQARGRARADESTYALVASSGSGAVE
REDVNIFREKMMYKAIQRVQKMPQEEYLNKIQSYQLQSIVEKQMKAKRDQHKTYKKNPSL
IKFLCKTCYKPVCSGEDIQVIEDMHHVSVRKDFQSLYHTRENRTLQDKNADYQTNGEIIC
KHCGQAWGNMMVHRGLDLPCLKIRNFVVVFADKKTTKQIFKKWGELPIRFPGFDYAAHCP
SSDEY
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaaaccacatctcagggagagaccttccaacagcctcagacaccaaggaagcac
ctcgttgctgccagtgcgtgcctgggcagcagccagcgcccaaaacacaagatatgctgc
agcctggccgcctgctacgccaaccccagcctgagccagctgccctcgccggcagaggag
gccgagcacgacctctgcgtgcacctggtgcagctgctccacggcacgctggtggacagg
atgcggaccgtgcaggtggccgagaagtgcctggagatgggcatcttccaggacgaggac
atggatcggatccagacagttgctgacaatcgtgggaacagagatggcgcgagggagcta
ctgagcagaatagtgcagaagaaagattggttctcttcttttttggttgctctccgtgaa
actcaacatgaagaccttgcagatgatttaagcggaaatacaggaggaacagaaaataaa
caaaatgggatggagaagagtacaaacgaagaagcagaagttacaagccaaccaggatac
ctcagagcagataatttgaaacaggaagaaaatgtggatgatagtttcagcagtgagaac
agtgtattggaaacatccatagaaaagaattctgtggtgtcagactcagatgtctccata
ggagatggaagtgtcagtaacttgaatgaaaacctgggacagagctgcacaaccagtgat
tcagatgaagatgaaggggagaggagagcctcacctgagccagatctgaccctgagagat
taccagatggaagttgcaaagccagcactgaatggggagaatattataatatgtctccct
acaggcagtggtaaaaccagagtggctgtttacattaccaaagatcacttggataagaag
agaagagcatcagagcctggaaaagtcatagtacttgttaataaggtgccattggtagaa
cagcatttacaaacagagttcagcccattcctgaagcgtcagtatcaggttattggttta
agtggtgattctcagctgaaaatctcatttcctgaagttgtcagaagaaatgatgtcatc
atcagtacagcacagatccttgagaattcactgttaaatgcatccaaggaagatgaagaa
ggtgtccacttatcagatttttccctcatcattatcgatgagtgccatcacactcaaaag
gaaggtgtctacaacaatataatgcgacgttacttaaaagagaagatgaagaacaaaaag
ctggcaaaagaaaacaaaccacagatcccacagcctcaaattctgggactgacagcctca
cctggtgtaggaggtgcaacatcctactcaaaagctgaagagcatattctgaaaatctgt
gccaatcttgatgcatgtagaattatgactgttgaagagcatgtctcccagctgaagaat
caggtaaaggagccctctaagaagactgtgattgcagatgacaaaaaaagggatccattt
aaagagagaattactgagataatgacagaaatacaaaattattgccagttgcatccaaaa
tctgagtttggaactcagacatatgaacagtgggtgatcagagaagagagaagagctgca
aaagaagaaaaacgcagggaacgtgtctgtgcagaacacttgaagaaatacaatgatgct
ctccagataaatgacaccatccgaatggtggatgcctacaatcacctaaataacttctat
aaagaggagaaaagtaagaagacagtaaggagtgatgatgatgatgatgatgatgatgat
gatgaaccagcagtatcaaaacaggatgaaacagatgaatttctaatgggtttatttcat
gcaaaaaagaatcagctgaaagagttgactagacagccagaaaatgaaaatgagaagcta
ataaagttgagaaatactctaatggaggagttcacaaagactgaggaacctcgaggaatt
attttcacaaagactcgtctaagtgcctttgctctatcccagtggattaaggacaaccca
aaatttgaagaagtgggaattaaggcccattatcttatcggctctggtcataacagtgag
atgaagcccatgactcagaatgaacaaagggaagttattgataaatttcgacgtggaaat
gtaaatttactaattgctactactgtagctgaggaaggcctggacatcaaagagtgtaac
attgttattcgctatggcctcgtcaccaatgaaattgctatgctgcaggctcgtggtcga
gctcgagctgatgaaagcacctatgctcttgtggcttcaagtggctcaggggctgttgaa
cgtgaagatgttaatatttttcgtgagaaaatgatgtataaggccattcagcgtgtccag
aagatgccacaggaagagtatttaaataagattcagagttaccagttgcaaagtatagtg
gaaaagcaaatgaaggcaaagagagatcagcacaagacatacaagaaaaatccttcacta
ataaaattcttatgcaaaacttgctacaagccagtatgttctggagaagacatacaagtt
attgaagacatgcatcatgtcagtgtgagaaaagatttccaaagtctttatcatacaaga
gaaaatagaacactgcaagataagaatgctgattaccagaccaatggggaaattatatgt
aaacactgtggacaagcttggggaaatatgatggtacaccgaggtcttgacctgccttgc
ctaaagattagaaattttgtggttgtgtttgcagacaagaaaacaacaaagcaaattttt
aagaaatggggagaactgcccatcaggtttcctggttttgattatgcagctcattgtcct
tcaagtgatgaatattaa
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integrated database retrieval system
