Corvus brachyrhynchos (American crow): 103625667
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Entry
103625667 CDS
T08418
Symbol
SLIT2
Name
(RefSeq) slit homolog 2 protein
KO
K06839
slit 2
Organism
cbrc
Corvus brachyrhynchos (American crow)
Brite
KEGG Orthology (KO) [BR:
cbrc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cbrc00536
]
103625667 (SLIT2)
Glycosaminoglycan binding proteins [BR:
cbrc00536
]
Heparan sulfate / Heparin
Axon guidance molecules
103625667 (SLIT2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
EGF
Laminin_G_1
Laminin_G_2
LRR_9
LRRNT
hEGF
LRR_1
LRRCT
EGF_TEN
LRR_14
EGF_DL_JAG
EGF_3
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
103625667
NCBI-ProteinID:
XP_008643350
LinkDB
All DBs
Position
Unknown
AA seq
1480 aa
AA seq
DB search
MWDLNGNNITRITKTDFAGLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNNLQLL
SELLFLGTPKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLE
VLTLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLGAAGGGRRXXXXXX
XXXXXXEVKRRECVCSDEEEGHQSFMAPSCSVLHCPTACTCSNNIVDCRGKGLTEIPTNL
PETITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISEAAPDAFQGLRSLNSLVLYGN
KITELPKGLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSP
LRAIQTLHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKFRC
SAKEQYFIPGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQKLNKIPDHIPQYTAEL
RLNNNEFSVLEATGIFKKLPQLRKINLSNNKITDIEEGAFDGASGVNELLLTSNRLESVQ
HKMFKGLESLKTLMLRSNRVSCVGNDSFTGLSSVRLLSLYDNQITTVAPGSFDTLHSLST
LNLLANPFNCNCHLAWLGDWLRKKRIVTGNPRCQKPYFLKEIPIQDVAIQDFTCDDGNDD
NSCSPLARCPAECTCLDTVVRCSNKGLKALPKGIPKDVTELYLDGNQFTLVPKELSNYKH
LTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPARTFDGLKSLRLLSLHGNDIS
VVPEGAFNDLSALSHLAIGANPLYCDCNMQWLSDWVKSEYKEPGIARCAGPGEMADKLLL
TTPSKKFTCQGPVDVNILAKCNPCLSNPCKNDGTCNNDPVDFYRCTCPYGFKGQDCDIPI
HACISNPCHHGGTCHLKEGEKDGFWCTCADGFEGENCEVNVDDCEDNDCENNSTCVDGIN
NYTCLCPPEYTAANLNEVEKGELCEEKLDFCAQNLNPCQHDSKCILTPKGYKCDCTPGYV
GEHCDIDFDDCQDNKCKNGAQCTDAVNGYTCICPEGYSGLFCEFSPPMVLPRTSPCDNYE
CQNGAQCIIKESEPICQCLSGYQGEKCEKLISINFINKESYLQIPSAKIRPQTNITLQIA
TDEDSGILLYKGDKDHIAVELYRGRVRVSYDTGSYPASAIYSVETINDGNFHIVELLAMD
QILSLSIDGGSPKIITNLSKQSTLNFDSPLYVGGMPVKNNIAALRQSPGQNGTSFHGCIR
NLYINSELQDFRNVPLQVGILPGCEPCHKKVCVHGTCHATSQSGFSCECEGGWTGPLCDQ
QTNDPCLGNKCVHGTCLPINAFSYSCKCLQGHGGVLCDEEEMLFNPCQSIRCKHGKCRLS
GLGKAYCECGSGYTGDSCDKEISCRGERVRDYYQKQQGYAACQTTKKVSRLECKGGCSAG
QCCGPLRSKRRKYSFECTDGSSFVDEVEKVVKCGCTSCPS
NT seq
4443 nt
NT seq
+upstream
nt +downstream
nt
atgtgggatcttaatggaaataacatcacaagaatcacgaagactgactttgctggtcta
aggcaccttcgagttcttcagctcatggagaacaagattagtactattgagagaggagca
ttccaggatttaaaagaactggagaggctgcgcctaaacagaaataacctccagttgctt
tctgaactgctctttctggggacaccgaagttatacaggcttgatcttagtgaaaatcag
attcaagcaataccaaggaaggcattccgaggagcagtagacataaaaaatctgcaactg
gattacaaccagatcagctgtattgaagatggggcatttagggctctgcgtgacctggaa
gtgctcactctcaacaataacaacatcactcgactgtctgtggcaagtttcaaccatatg
cccaaactcagaacattccgccttcactccaacaacctgtactgcgattgccacctggcc
tggctgtcggactggctgggggcggcgggcggcgggcggcgcgnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnncgaggtcaagaggcgcgagtgtgtctgcagcgatgaggaagaa
ggtcaccagtcctttatggctccatcctgcagtgtcttgcactgccctactgcatgcacc
tgtagtaacaacattgtggactgtcgtgggaaaggccttactgagatcccaacaaacctt
ccagaaaccattactgaaatacgcttggaacaaaattcaattaaggtcatacctcctgga
gctttctccccctataaaaagcttcgaagaattgacctgagtaataaccagatctctgaa
gcagctccagatgctttccagggcttacgttcactcaattcactagtcctctatggcaat
aaaatcacagaacttccaaagggcctgtttgaaggactcttttctctgcaactgctatta
ctgaatgccaacaagatcaattgtctgcgagttgatgcatttcaagatctgcacaacttg
aatcttctttctttgtatgacaacaagcttcagaccattgcaaaaggcaccttctcaccc
ctacgtgcgattcagaccttgcatttggctcagaacccatttatctgtgactgccatctg
aagtggctggcggattatcttcacacaaaccccattgagaccagtggtgcccgttgcacc
agcccccgccgtctggcaaacaaaaggatcggccagatcaaaagcaagaaattccgctgc
tcagctaaagaacagtatttcattccaggcactgaagattacagatccaaattaagtgga
gactgctttgcagatttggcctgccctgagaaatgtcgctgtgaagggaccacagtggac
tgctccaatcagaaactcaacaaaattcctgatcacatcccccagtacacagcagagttg
cgactaaataacaatgaattttcagtcctggaagctactggaatctttaagaaacttcct
cagctgcgtaaaataaacctgagcaataacaagattacagatatagaagaaggagcattt
gatggagcctctggtgtgaatgaactcttgctcacaagcaaccgcttggaaagtgttcaa
cacaaaatgttcaaaggactagaaagtctcaaaacactgatgctgaggagcaacagggtg
agctgtgtgggaaacgacagcttcacagggctgagctctgtccgcctgctctctctgtat
gacaaccagatcaccactgtggcgcccggctccttcgacacgctgcattcgctctctacg
ctaaacctcttggccaatcccttcaactgcaactgccatctcgcatggcttggagactgg
ctaaggaagaaacgcattgtgacggggaaccctcgctgccaaaaaccctacttcctcaaa
gagattcctatccaggatgtggcaattcaggattttacatgtgatgatggaaatgatgac
aatagctgctctcccctggcccgctgccctgcagaatgtacttgtctggacacagtagtt
cgctgcagcaacaaaggtctgaaagccttgcctaaaggcatcccaaaagatgtaactgaa
ctatatttggatggaaatcagtttacccttgttccaaaagagctttccaactacaagcat
ttaacactcatagatttaagtaacaacagaatcagcactctttctaatcagagcttcagc
aacatgactcagctgctcaccttaattcttagttacaaccgcctaagatgtatccctgca
cggactttcgatgggctgaaatcacttaggttgttgtctttacatggcaatgatatttct
gttgttcctgaaggagcctttaatgatctttcagcattatcacacctggctattggagca
aatcctctttattgtgattgtaacatgcagtggctatctgactgggtaaaatcagaatac
aaagaacctggtattgcacgttgtgctggtcctggagaaatggcagataaacttcttctc
acaactccttctaagaaatttacttgccaagggcctgtggatgttaatattcttgcaaag
tgtaatccctgtttatcaaatccatgtaaaaatgatggaacctgcaataatgatccagtt
gacttctacagatgtacatgcccatatggtttcaagggtcaagactgtgatattcccatt
catgcttgcattagtaacccgtgccaccatggtggaacttgtcacttgaaagaaggagaa
aaagatggtttctggtgcacttgtgcagacggatttgaaggtgaaaactgtgaagtaaat
gttgatgactgtgaagacaatgactgtgaaaacaattctacttgtgtggatggaattaat
aactatacttgcctttgtccacctgaatatacagctgctaatctgaatgaagtggaaaaa
ggtgaactctgtgaggagaaattagatttctgtgcccaaaacctgaatccttgccagcat
gattcaaagtgtatcttgacacccaaaggatacaaatgtgattgcacacctggatatgta
ggtgagcattgtgatattgactttgatgactgccaagacaacaaatgcaaaaatggagcg
cagtgcactgacgcagttaatggatatacatgcatttgtccagaaggatacagtggcttg
ttttgtgaattttcaccaccaatggttctacctcgcaccagcccttgtgataattatgaa
tgtcaaaatggagcccagtgtatcataaaagaaagtgaaccaatttgtcagtgtttatca
ggctaccagggtgagaaatgtgaaaagttgattagtataaacttcatcaacaaagaatcc
tatctgcaaatcccttcagctaagatacgcccccagaccaatatcactctacagattgcc
acagatgaagacagtgggatcctgctgtacaaaggtgataaagatcatatagcagtggaa
ctgtaccggggtagagtgagggtcagctatgacacaggatcatatccagcctctgctatt
tacagtgtggaaacaattaatgatggcaatttccacattgtggagctactagctatggat
cagattctatctttatctattgatggaggaagtcccaagataattaccaatttgtccaag
caatccactctgaattttgattctccgctgtatgtgggaggcatgcctgtgaaaaataac
atagcagctttacgccagtccccagggcagaatggcactagcttccatggctgcatccgt
aatctatatatcaacagtgaactccaggacttcagaaatgtgccactgcaagtgggaatt
ctgccaggttgtgagccttgtcataagaaagtttgtgtgcatggaacatgccatgctacc
agccagtcaggcttttcctgtgagtgcgaaggaggatggaccggacctctctgtgatcaa
caaactaacgacccatgtcttggaaataaatgtgtgcatggtacctgcttgccgatcaat
gcattttcatacagttgtaaatgcctgcagggacatgggggagtcctctgtgatgaagag
gaaatgctgtttaacccctgccaatccatcaggtgtaaacatggcaaatgtaggctttca
ggacttgggaaagcatattgcgaatgcggcagcggatacacgggggacagttgtgataaa
gaaatctcttgtcgaggggaacgagtccgagattactaccaaaagcagcaagggtatgct
gcgtgccagacgaccaagaaggtatcgagactagaatgtaaaggcgggtgctcagccggg
cagtgctgtgggccactacggagcaagagacggaaatactccttcgaatgcactgacggg
tcgtcatttgtggacgaggttgaaaaagtggtgaagtgtggctgtacaagttgtccctcc
taa
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