Corvus brachyrhynchos (American crow): 108447230
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Entry
108447230 CDS
T08418
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
cbrc
Corvus brachyrhynchos (American crow)
Pathway
cbrc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cbrc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
108447230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cbrc03021
]
108447230
03036 Chromosome and associated proteins [BR:
cbrc03036
]
108447230
Transcription machinery [BR:
cbrc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
108447230
Coactivators
SAGA/TFTC/STAGA complex
108447230
Chromosome and associated proteins [BR:
cbrc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
108447230
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
108447230
NCBI-ProteinID:
XP_017592043
LinkDB
All DBs
Position
Unknown
AA seq
679 aa
AA seq
DB search
TTIQLPPGFTIPPGMVLVRTDAGQLVMVPQQALAQAQMQAQVQTQGQGPASLSPRLSVPT
TGPVFRLSTAQQPTSVAASSVRLGLPVQAKVVPSTAAPVSATATLPGGAVLSHTTVSVAT
TSAQNLFKTTVATGTSSSQQPAVITGGQSQGSAQPQGQPRLPLPPHTAAQVPAQPLVIPS
SPVPGTTVVSQEMQENVKKCKNFLATLIKLASHNSPSPETSRNVKALVQDLLDAKIDPEE
FTGRLQTELKSSPQPYLVPFLKKSLPALRQSLLNSQHLVLQGQPSQQSLQQTKLSQVIPQ
SASGSISSVVTTQTIGIRQPNNICTVSVSNTVQPPQVKVVQSNQSSQLQIIQSTSAQTVK
RTPACQTTQIRMPVVITQTIRPQGTVGKAPTIQASKSPGGFGVQVSANQKNKLNDPGGGS
FRDDDDINDVASMAGVNLNEESARIMATNSDLVGTQIQSCKDEPFLAAIPLHKRILETAK
KLGITDVPAEVVTFISHATQNRLRTVIEKVTVITQHRMESYKDDEWYEQATDVRSQLKFF
EQLERLEKQRKDEQEREILLKAAKSRSRQEDPEQARLKQKAKEMQQQELAQMRQRDANLT
ALAAIGPRKKRKLDAPGLLTIGGEGVGVCAGSQAGLGTASPRQYPRQKITRVNLRDFIFY
MEQEREMSHSLLLYRALLK
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
actaccatccagctgccccccggcttcaccatcccgcccgggatggtcctggtgcgcacg
gatgctggacagctcgtgatggtgccccagcaggctctggcacaggctcagatgcaggct
caagtgcagacacagggacagggtcctgccagcctgtcacccaggctttctgtgcccaca
actggccctgtttttcgcctgtcaacagctcagcagccaacatccgtggccgcctccagc
gtccgcctgggcctccccgtgcaagccaaggtggtgccatcgacggctgcgcccgtcagt
gccacggccacgctgccaggaggggctgtgctctcccacaccacggtatcagtagctacg
acgagtgctcaaaatttgttcaagacaacagtagcaacgggaacttcatcttctcaacag
cctgcagtgatcactggtggacagagccagggctcagcccagccccaaggtcagccccgg
ctgccactcccccctcacacagcagcacaggtaccagcacagcccctggtcattcccagc
tctcctgtgcctggaactacggttgtatcgcaggaaatgcaagagaatgtgaaaaaatgc
aaaaactttttagctacccttataaaacttgcttctcataactcaccatcaccagaaaca
tcccgcaatgtgaaagctctggttcaagatttgttggatgcaaagattgatccagaagaa
tttacaggccgccttcaaacagaactcaaatcatctcctcagccatatcttgtacctttc
cttaagaaaagtctacctgcactgagacaatctttactgaatagtcaacatttggttttg
caaggacagccgtctcagcagtcactccaacaaaccaagctctcacaagttatacctcaa
tctgcctcgggaagcatttcctctgttgtcacaacgcagacaataggaataaggcaacca
aacaacatttgcaccgtctctgtatcaaatacagtgcagcctcctcaggttaaggtggta
cagtcaaatcagagttctcaactgcagattatccagtcaacatctgctcaaactgtgaaa
cgaacccctgcttgccagactacccagattaggatgccagtggtaataactcagaccatt
agaccacaaggcacagtagggaaggcaccaacaatacaagccagtaaaagtcctgggggc
tttggtgttcaggtctctgcaaatcagaaaaacaagctgaatgaccctggaggtggttct
ttcagagatgacgatgacatcaatgatgttgcctctatggctggtgttaatcttaatgaa
gaaagtgcccgaattatggctaccaactctgacttggttggaacccagatccagtcctgt
aaagatgaaccctttcttgctgctatacctctccataaacgcatacttgaaacggctaaa
aaactaggaattactgatgtgccagctgaggtcgttacttttatttcccatgcgacacag
aacagattaagaacagtgatagaaaaagtgacagtgataacccagcaccgaatggagtca
tacaaagacgatgaatggtacgaacaagccacagatgtccgatcacagctgaagttcttt
gagcagttggagcgtttagaaaagcaaaggaaagatgaacaagagagggaaatcttgctg
aaggctgctaagagtcgctcaaggcaagaagacccagagcaagctagactgaaacaaaaa
gcaaaggagatgcagcagcaagagcttgcccagatgaggcagagggatgccaatctaacg
gcactggcagccatcggtccccggaagaaacggaagctggatgcacctggcctgctcacc
ataggaggagagggtgtgggggtgtgtgctggcagccaggccgggctgggcacggcctcc
ccccggcagtacccccggcagaaaatcacgcgcgtgaacctcagggacttcatcttctac
atggagcaggagcgagaaatgagccattctctgctgctctaccgagctctgcttaaataa
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