Corvus brachyrhynchos (American crow): 108447295
Help
Entry
108447295 CDS
T08418
Symbol
COL25A1
Name
(RefSeq) collagen alpha-1(XXV) chain
KO
K24356
collagen type XXV alpha
Organism
cbrc
Corvus brachyrhynchos (American crow)
Brite
KEGG Orthology (KO) [BR:
cbrc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cbrc00536
]
108447295 (COL25A1)
Glycosaminoglycan binding proteins [BR:
cbrc00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
108447295 (COL25A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
108447295
NCBI-ProteinID:
XP_017592264
LinkDB
All DBs
Position
Unknown
AA seq
560 aa
AA seq
DB search
MDGKLGQPGPQGPPGPKGEKGDQGDQGPRGLPGFPTVAALHSNQILTVKGDQGQAGPPGP
PGPPGPRGPPGDTGKDGPRGMPGLTGEPGKPGEQGLTGPQGPPGQKGSVGVPGVPGRDGQ
VGEPGLPGIAGEKGEAGLKGDPGERGEKGDAGENGLKGDTGEKGDPGSSAAGIKGEPGES
GRPGQKGEPGLPGLPGLPGIKGEPGFIGPQGEPGLPGLPGTKGDRGEAGPVGKGERGEPG
IPGPKGKTGEPGSRGPKGSKGDTGERGDTGSAGPRGPPGQKGDQGATEIIDYNGNIHEAL
QRVATLTVTGPPGPPGPQGLQGSKGEPGSPGTPGADGEQGPKGSKGDTGDPGMPGEKGGI
GLPGLPGANGMKGEKGDIGLPGAQGPSVIGPPGPPGPHGPPGPMGPHGLPGPKGEPGLNG
LKGLKGEPGQKGDRGPLGLPGASGLDGKPGARGVDGPVGPHGPAGPKGERGEKGTVGDPG
PRGPYGLPGKDGEPGLDGFPGPRGEKGDIGEKGEKNTVGEKGKKGKKGPKGEKGEQGAPG
LDAPCPLGPDGLPMPGCWQK
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atggatggaaagctgggtcagcctggtcctcaaggccctcctggtccaaaaggcgagaag
ggagatcaaggtgatcagggccctcggggcctgccaggcttccccacagttgctgctctg
cacagtaatcagatcctcaccgtcaagggggaccaaggacaagctggaccccctggacct
ccaggaccaccaggacccagaggtcccccaggagatactggcaaagatggtcctcgtggg
atgcctggcttaacgggtgagccaggaaaaccaggagaacaaggactgacaggacctcag
gggcctccaggacaaaagggttctgtcggagtgcctggtgttccagggagagatggacaa
gtgggtgaacctggtttgcctggcatagcaggagagaagggagaagcagggctcaagggt
gaccctggagaaagaggagaaaagggggatgctggcgagaatggactgaagggtgacaca
ggagaaaagggtgaccctggctcttctgcggctggaattaagggtgaacctggtgaatct
ggacggcctggacaaaagggtgaaccaggccttcctgggcttcctggactccctggaata
aagggtgaaccaggtttcattggtccacaaggagaacctgggttgccagggctaccagga
acaaagggtgacagaggagaggcaggccctgttgggaagggtgagcgaggtgaacctgga
atccctggaccaaaggggaaaacaggtgaacctggatctagaggccccaaagggtcaaag
ggtgatacaggtgagagaggtgacacgggatctgcaggtccacggggaccacctggacag
aagggtgatcaaggtgcaacagagataattgattataatggcaatatccatgaagctctg
cagagggttgccaccctgactgtcacgggaccaccaggaccaccaggaccccaagggctg
caagggtcaaagggtgaaccaggatccccaggaactccaggagctgatggagagcagggt
cctaagggctcaaaaggagacacaggtgatcctggaatgcctggagaaaagggaggaatc
ggactgcctggcctaccaggagctaatggcatgaaaggcgaaaaaggagacattggtttg
cctggtgcccaaggtccttcagtgataggaccacctggaccaccagggccacatggtcct
ccaggccctatgggacctcatggactgcctggcccaaagggtgaaccagggttaaatggt
cttaaaggattgaagggtgaaccaggtcaaaagggtgacagagggccccttggtcttcca
ggagcatctggcttagacggaaagccaggagcccggggtgtagatggcccagttggtccc
catggccctgcaggtcccaaaggagagagaggtgagaagggaactgtaggtgaccctgga
cccagaggaccatacggcttgcctggcaaagacggcgagcctggccttgatggtttccct
ggtcctcgaggagaaaagggtgatataggagaaaagggagaaaagaacacagtgggggaa
aagggaaagaaaggcaaaaaagggcctaaaggggagaaaggagaacagggtgctcctgga
ttagatgcaccttgcccattgggtcctgatggattaccaatgcctggctgttggcaaaag
tga
DBGET
integrated database retrieval system