Corynebacterium breve: QP027_04170
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Entry
QP027_04170 CDS
T09532
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
cbre
Corynebacterium breve
Pathway
cbre03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cbre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QP027_04170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbre03019
]
QP027_04170
03009 Ribosome biogenesis [BR:
cbre03009
]
QP027_04170
Enzymes [BR:
cbre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
QP027_04170
Messenger RNA biogenesis [BR:
cbre03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QP027_04170
Ribosome biogenesis [BR:
cbre03009
]
Prokaryotic type
rRNA helicases
QP027_04170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
UvrA_inter
CMS1
adh_short
DUF6892
AAA_22
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
WIM68596
LinkDB
All DBs
Position
834461..836638
Genome browser
AA seq
725 aa
AA seq
DB search
MSNSENATGSENSPENFTESETQMNPQDVAVENTASDDTRDAENSEDTGVETENTDSTNE
DTEENNDVTSEPAAEESKEAANGFENLNLPDKVVQAVKRVGFEQPSAIQAETIPLLMEGR
DVVGLAQTGTGKTAAFALPILSQIDPSERHPQALVLAPTRELALQVADSFQSFADHLGKI
QVLPIYGGQAYGVQLSGLRRGAQIIVGTPGRVIDHLEKGSLDISKLRFLVLDEADEMLNM
GFQEDVERILEDTPDEKQVALFSATMPNGIRKISKQYLNDPAEVTVKSETRTNTNITQRY
LFTAHRNKLDAITRILEVTEFEAMIVFVRTKHETEEIAEKLRARGFSAAAINGDIAQQQR
ERTVDQLRDGRLDILVATDVAARGLDVERISHVLNYDIPNDTESYVHRIGRTGRAGRKGE
AILFVTPRERRMLRSIERVTNATIEEMDLPTVDEVNESRKANFADSITASLESKQIDVFR
SLVKAYSEANDVPMEDIAAALATQAQAGDEFLMKEPPKQKRDRDFDRGGRDFDRRDRGDR
RDRDFGDRRERGGRDRFERNGNFDTYRLAVGKRQHVRPGAIVGALANEGGLSSKDFGRIT
IAVNHTLVELPKNMDSSVLDRLSDTRISGQLINIERDHGGPQRDQGDDRGGYRGGRGGRD
RDDRGGRGGYRRDRGGRGDREDRGGYRGGRDRDDRGGYRGGRDRDDRGGYRGGRDDRGGR
GQWRD
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgagcaattccgaaaacgctaccggcagcgaaaattcgccggagaactttaccgagtcg
gaaactcagatgaacccgcaggatgtcgcagtggaaaatactgcttctgatgacaccagg
gatgcggaaaactctgaggataccggcgttgagaccgaaaacacggactcgaccaacgaa
gataccgaagaaaacaacgacgtaacctcagaacccgcagcggaggaatccaaagaagct
gccaatggtttcgagaacctcaacctgcctgacaaggtagttcaggctgtaaagcgcgtc
ggattcgaacagccatctgccattcaggcagagaccattccactgttgatggaaggccgc
gacgtagtcggccttgcacagaccggtactggcaagaccgcagcattcgcgctgccgatc
ctgtcccagatcgatccgtctgagcgtcacccacaagcactggtcttggcaccaacccgc
gagctggcactccaggtcgctgactctttccagtccttcgctgaccacctgggcaagatc
caggttctgccgatttacggcggtcaggcatacggcgtgcagctttccggcctgcgtcgt
ggcgcacagatcatcgtcggcacccctggccgtgtgattgatcacctggagaagggctcc
ctggacatctccaagctgcgtttcctcgtacttgacgaggcagacgagatgctcaacatg
ggcttccaagaagacgttgagcgcattctggaagacaccccggacgagaagcaggttgca
ctgttctcggcgaccatgccaaacggcattcgcaagatctccaagcagtacttgaatgat
cctgcagaggtcaccgtgaagtcggagacccgcaccaacaccaacatcacccagcgctac
ctcttcaccgcgcaccgcaacaagctcgacgcgatcacccgcatccttgaggtgaccgag
tttgaagcaatgatcgtgttcgtgcgcaccaagcacgaaaccgaagaaattgccgagaag
ctgcgcgcacgtggcttctccgcagccgcgatcaacggcgatattgcccagcagcagcgt
gagcgcaccgtcgatcagctgcgtgatggccgcctggacatccttgtcgcaaccgacgtc
gccgcccgtggcctggacgtagagcgcatctcacacgttttgaactacgacatcccgaac
gacaccgagagctacgtgcaccgcatcggtcgtacgggccgtgcaggtcgtaagggcgaa
gcgatcctgtttgttacccctcgtgagcgtcgcatgctgcgttccatcgaacgcgtgacc
aacgcgaccatcgaagagatggatctgccaaccgtcgatgaggttaacgagtcccgcaag
gctaattttgctgactccatcacagcgtcgctggaatccaagcagatcgacgtcttccgt
tcgctggtcaaggcatactccgaagcaaacgacgtcccaatggaggatatcgctgcggca
ctggctacccaggcgcaggctggcgacgagttcttgatgaaggagccaccaaagcagaag
cgtgaccgcgacttcgaccgtggtggtcgtgatttcgatcgtcgtgaccgtggtgaccgc
cgtgatcgtgacttcggtgatcgtcgtgagcgcggtggacgcgatcgcttcgagcgtaac
ggtaactttgacacctaccgacttgccgtgggtaagcgtcagcacgttcgcccaggtgcc
atcgtcggcgcattggctaacgaaggtggcttgagctccaaggacttcggtcgcatcacc
atcgctgttaaccacaccttggtcgagctgcccaagaacatggactcttccgtactcgat
cgcctgtctgatacccgcatttcgggccagctgatcaacattgagcgcgaccacggtggc
cctcagcgtgatcagggcgacgatcgtggcggctaccgcgggggacgcggtggacgcgac
cgagacgatcgcggtggacgcggcggataccgtcgtgaccgtggcggacgtggcgatcgt
gaagatcgtggcggctaccgtggcggacgcgaccgcgacgaccgtggtggttaccgcggg
ggacgcgaccgtgatgatcgtggtggttaccgcggtgggcgcgatgatcgcggcggccgt
ggacagtggcgcgactag
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