Culicoides brevitarsis: 134826975
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Entry
134826975 CDS
T10947
Name
(RefSeq) SR-related and CTD-associated factor 4 isoform X1
KO
K13191
RNA-binding protein 16
Organism
cbri Culicoides brevitarsis
Brite
KEGG Orthology (KO) [BR:
cbri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cbri03021
]
134826975
03041 Spliceosome [BR:
cbri03041
]
134826975
Transcription machinery [BR:
cbri03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
134826975
Spliceosome [BR:
cbri03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
134826975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
134826975
NCBI-ProteinID:
XP_063695559
LinkDB
All DBs
Position
1:complement(22301006..22305609)
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AA seq
1021 aa
AA seq
DB search
METVRLFNAELQSLYEITPPISKQKMGSITRTAMKSIKFYKHVVQSVEKFIQKCKTEYKI
PGLYVIDSIVRQSRHQFGPEKDVFAPRFARNMETTFAHLFKCPPEDKSKIIRVLNLWQKN
SVFPPETVQPLFDLANPDHPLHQSQALEAANNSMDQSLQLGPGDELLAGQDKSKPLDQNT
IRQLQQFQQMLMRQTSGENSSVKFNKNLLDFDYGEDEEDHGAHSSSPHASNAIPDPKSLT
QILSDPNIVKHLQNIQILKQNEMENQKNTKLTEMRLQEEKFEKHLATVLKKLPFANECDL
SKQSTNDYSLQSQTTYGMGSSAYNTLQYVQMQAEAGNMPDTDPEVQFVSSNDKDEVINLD
ANESRSSSPRHDRYRRRRSRSRSRDRSKRDRRRRTLSRSRSRSPRRSRRSREREREHEKE
RKRKGLPDIKKDHLSVCSTTLWVGHLSKLVQQEELSDTFGKYGDIVSIDMIPPRGCAFIV
MHRRQDAYKSMQALKGYKMHNRVITISWAAGKGVKSKEWKDYWDIDLGVSYIPWNKLTKT
TNFSELEEGGMFDEETMPSWLKDKLKEQPAKEEGEMAMPPNPLMFGVPPAIDTSQPPPAP
ALMIPNFPMTPVPRLITPMGIPVPMLNIPPPHMMMSNPASALMPLNPFSAPPPSFNAQLF
GNSVPVPITNATDDHMDIEGEEEMSNNSNKPPVKSHDGGYNAGANQKSYNQLQMGGGQRN
DDRTRDQQGRRDNSDRHDHRHGNRFNSAEREDSYERDSRRPRGLRNSGGPMRHDRERPLQ
DRLRDMAGNNGTPGGRYGPRGDNRGNYRNENYQGAMQRNDFNRGDDGYDRRNFGGNRFNN
NMPPMRGGRGGNQFGSRMQSNYGPRPGFQRYSMYDEERNNRGPDRRKQWNDDMEERPDRN
SPKYEKKQDEEETWDNEAEPRWNENESQTNEDCSASANSSNKNDTNAMNEPQDVPQSEEL
PQDQQESVVHSDNNVANQMQEENVVMEENVPQDTNASENMDNNQKENTETQEGGTTPLFD
E
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atggagactgttcggctgtttaacgcagagctgcaaagcttgtacgaaatcacacccccg
atatcaaaacaaaaaatgggctccattacccggacagcgatgaaatctataaaattctat
aagcatgtagtgcaaagtgtcgaaaagttcattcaaaaatgtaaaactgaatacaaaata
cccggattgtatgtgatagactcgattgtccgtcaatcaagacaccagtttgggccagag
aaggatgtttttgctcccagatttgcccgaaacatggagactacttttgcccacttattc
aagtgtccgccagaagataagagtaaaatcatcagagtgctaaatttgtggcagaaaaat
agtgtttttccacccgaaacagtccagccgctctttgatttggcaaatccagatcatccg
ttgcaccaaagtcaagctttggaagctgcaaacaactccatggatcaaagtcttcagttg
ggtccaggagacgaattgttagctggacaagacaagagcaagccattggatcaaaatacc
attcgacaattgcagcaatttcaacaaatgctaatgcgtcaaacatcgggtgagaactca
tcggtgaaattcaacaagaatcttctcgactttgattatggggaggatgaagaagatcat
ggtgcccatagctcgtcgcctcacgcttcaaacgccataccagatcctaaaagcttaaca
cagattttatcagatcccaatattgtaaagcaccttcaaaatattcaaatcttaaaacag
aacgaaatggaaaatcaaaaaaatacaaagctaactgaaatgaggttgcaagaggaaaaa
tttgaaaaacatttagccactgtcttaaaaaaacttccatttgctaacgaatgtgatcta
agcaaacaatcgacaaatgattattctttgcagagtcagactacttacggaatgggatcg
agcgcctataacaccttacaatacgttcaaatgcaagcagaggcagggaatatgccagat
accgatccagaggtccaatttgtgtcaagcaacgacaaggatgaagttataaacttagat
gccaatgagtctagatcttcgtctccgaggcatgataggtaccgtcgccgaagatcacgt
tcaaggtctagagatcgctccaaacgcgatcgaagaagacgcactctcagtagaagtcgt
agtcgttcaccaagacgtagcagaagatccagagaacgtgaacgagagcatgaaaaagaa
cgcaaacgaaaaggtttacccgacataaagaaagatcatttgagcgtttgcagtacgaca
ttatgggttggtcatctaagcaaattagttcaacaggaggaactatctgatacttttgga
aagtatggcgatatcgtcagtattgatatgattccaccgagaggttgtgcttttattgtc
atgcatcgtcgacaggatgcatacaaaagtatgcaagctctcaagggttacaaaatgcat
aatcgtgtaattacaatttcctgggctgctggcaaaggcgtaaaaagcaaagagtggaag
gattactgggatattgatttgggagtcagttacataccatggaataaattgaccaaaacc
actaatttttcggaactcgaagaaggtggtatgtttgatgaggagactatgccatcatgg
cttaaggataaactgaaagagcaacctgcaaaagaagagggagaaatggcgatgcctcct
aatcctttaatgtttggagttcctccagcaatagacactagtcaaccgcctccagctcca
gctttgatgataccgaatttcccgatgactcctgttcctagacttataacaccaatggga
attcccgtacccatgttgaatatcccacctcctcacatgatgatgtccaatccagcatcc
gctttaatgccattgaatccattttctgcgccacctccttcattcaacgctcaactgttt
ggtaactcagttccagttccaataaccaatgccacagatgatcatatggatattgaaggt
gaagaagagatgtctaacaacagcaataaacctcccgtgaaatcgcacgatggtggttac
aatgctggtgcaaatcaaaaatcttataatcaattgcaaatgggaggtggtcaaagaaat
gacgatcgaactcgagaccaacaaggtagaagagacaactctgatcgacatgatcatcgg
catggcaacagattcaactcagcagaacgtgaggactcctacgaaagggacagcagacga
ccaagaggattgagaaattcaggaggtcctatgcggcatgaccgggaaagaccgttacag
gaccgtttaagagacatggctggcaacaatggcactccaggtggtcgttatggtccacgt
ggtgataatcgtggaaattatcgcaatgaaaattatcaaggggcaatgcaaagaaatgat
ttcaaccgtggtgatgatggctatgatcgtcgaaatttcggaggtaatagatttaacaat
aatatgcctcctatgcgtgggggacggggtggaaatcaatttggatcgagaatgcagtcc
aattatggccccagaccagggtttcaacgatattcaatgtacgacgaggaacgtaataat
cgaggtccagatagacgtaaacagtggaatgacgatatggaagaaagacctgatcgaaat
tctccaaaatatgaaaagaaacaagatgaggaagaaacttgggacaatgaagcagagcct
cgatggaatgaaaatgagtctcaaactaatgaagattgttcagcatccgcaaattcttca
aataaaaatgacactaatgcaatgaacgaacctcaagatgtacctcagtcagaggagctg
cctcaagatcagcaagagtcagttgtgcattcagataacaacgtggcaaaccagatgcaa
gaggaaaatgtcgtcatggaggaaaatgtaccacaagacacaaatgccagtgaaaatatg
gacaacaatcaaaaggaaaacacagaaacgcaagaaggtggaacaacacccttgtttgac
gagtga
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