Culicoides brevitarsis: 134827014
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Entry
134827014 CDS
T10947
Name
(RefSeq) DNA repair protein complementing XP-C cells homolog
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
cbri Culicoides brevitarsis
Pathway
cbri03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cbri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
134827014
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbri03400
]
134827014
DNA repair and recombination proteins [BR:
cbri03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
134827014
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Transglut_core
ImpA_N
Motif
Other DBs
NCBI-GeneID:
134827014
NCBI-ProteinID:
XP_063695608
LinkDB
All DBs
Position
1:11882606..11886721
Genome browser
AA seq
1139 aa
AA seq
DB search
MSDEEEEWMSSEDDGDFSVSEDEWLPGSSEKKRKSRNDTMDSESDLSEEDEEDIETEDET
PDSGTPVKMTRKQAAKRGAVAKKKSPAGVRKLFSKYKAVPEATTSTTNVSTSLSDILKRS
QFQSKKLNSSQTESSQVSSTTKTLEDDDESSSSGDEHLVPADQINLNSDFFNVQPSTSRE
TQNEEPPDFDCNYGIEKSDESEEENDSETEFHGFSNESMNRSASKLPQKNKKKSQEKSKI
VDLQELHNFNKNLEDAKKKLEGFQSKNFAQEDVNVSQLLAMGEESAEKPKKSKETKSNKR
KHEESGSDWEEVEDELDNISCETQSKDLQITVELPGHSRKRTAKEVDIEAQIKRKLNNIK
KINQVYMHKVHLLCWIAYGNRVNKILNSPGLYKVALKTLPVPAKPCYPKDKTDIKYFENI
STWFRQQYSLTSQSVYPTMTTLPPLETSLTLQISNGKKMICKRDFCMAFIVLLRAMGFQA
RLVMSITGIPLKPPSSELCSLSKSKTFKGYKKQEEDNVKSPSKKTTLEELKKGRKKPEIK
EDPKPERKRKAPEDPKKSKKKRQDEPKLEQLDGANDTPPPKNRQKPSTSTNSVPSVDSPF
KKKIKGNTNGSPSIKLDNFAPPMKPKIKRLSEVPTFDVAPSPLKTRRQRQQEGSAPKMPA
KTKVTKTTSLPISNTKPETSTKKSPSILKTQTSSKKDPNSRKSVSFESPKPSTSKKSSGP
RGHQNKKQKIVIPSSDDEDLFEPDIVFNKPLVNKNVEKVKKIDRRMLSSDEDTPKRPGNK
KNHVNVWVEVYAEKEKRWITVDLFKGKVDCVDVICQNATSPITYVLAWNNDNSLKDVSPR
YCEHWNTVTRKLRVEKEWWDETIQPYLSKHVTERDKAENKYFEKIHSTKPMPTAISDFKN
HPLYALERHLLKFEALYPPDAQPIGWIRNEPVYPRDCVYTLLTREKWVKEARVVKLNEEP
YKIVTSPKWDKYAQKILKNCPVELFGIWQTAPYEPPTAENGIVPRNEYGNVELFKECMLP
KKTVHLKFAGLNKVCKKLNVDCAPAIVGFDFHNGWSHPVYDGFVVCEEFEELVTNAWIEE
QDELMKKEREKIEKRVYGNWRKLIKGLLIKKRLQARYNFEADDEEIEEEEEKTSKKSKK
NT seq
3420 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatgaggaagaagaatggatgtcaagtgaggatgatggcgacttttcagttagc
gaagacgagtggttgccgggttcgagtgagaaaaagcgaaaatcacgcaacgacacaatg
gattccgagagtgacttgagcgaagaggacgaagaagacatagaaactgaagatgagact
cccgattctggcactccggtaaaaatgacgcgaaaacaggcagcaaaacgaggtgcagtt
gcgaagaaaaaaagtcccgctggcgttcgaaagttattttcaaagtacaaagctgtcccc
gaagcaacaacatccactacaaatgtctcaacgagcctcagtgacatcctaaaacgatct
caattccaatcaaaaaagctaaattcatcacaaaccgagtcaagtcaagtgtcgtcgacg
acaaaaacgcttgaggatgacgacgaatcgagtagtagcggcgacgaacatctcgtacct
gcggatcaaatcaatttgaattccgatttttttaatgttcaaccctcgacgtcgcgcgaa
acgcagaacgaggaaccgccagactttgattgcaactatggcattgaaaaatcagacgaa
tctgaggaggaaaatgactcggaaacggaatttcatggatttagcaatgaatcaatgaat
cgcagtgcatctaaattacctcaaaaaaataagaaaaaatcacaagaaaagtcaaaaatc
gtagatttgcaagaattgcacaattttaataaaaatctcgaagacgccaagaaaaaatta
gaaggattccaatcgaaaaatttcgcccaagaagatgtaaatgtctcacaattgcttgcc
atgggcgaagaaagtgccgaaaaacccaaaaaatcgaaagaaaccaaaagtaataaacgc
aaacatgaggaatcgggttccgattgggaagaagtcgaagatgaattggacaacatttca
tgcgaaacgcaaagcaaggatttgcaaattaccgtcgaacttccgggtcacagtcgcaaa
cgaactgccaaagaagtcgatatcgaggcgcaaatcaagcgaaaattgaacaacatcaaa
aaaatcaatcaagtttacatgcataaagtgcatttgctttgctggatcgcttacggcaat
cgcgtgaataaaattttaaacagtcccggactctacaaagttgctttaaagactttgccg
gtgcctgcaaagccctgttaccccaaagataagaccgatatcaagtatttcgagaacatc
agtacgtggtttcgtcaacaatattcgttaacgagtcaaagtgtgtatccgacgatgacg
acattgccgccgctcgagacttcgttgacgttgcagatcagtaatggcaagaaaatgatt
tgtaaacgtgatttttgcatggctttcattgttttgttgcgagcgatgggatttcaggca
cgtcttgtaatgtcgatcacgggaattccattgaaaccgccttcgagcgagttgtgcagc
ttgtcaaaatctaaaacgttcaaaggatacaaaaaacaagaagaggataatgtcaaaagt
cccagtaaaaaaacgactttggaagagttgaaaaaaggacgcaaaaaacccgagatcaaa
gaagatccaaaacccgaacggaaacgaaaagcacccgaagacccaaaaaaatcaaagaaa
aaacgtcaagacgagccaaaattggagcaacttgatggcgccaatgacactcccccgccg
aaaaatcgtcaaaaaccatcgacatcaacgaattccgtgccctccgtcgacagtcccttc
aagaaaaagatcaaaggtaacacaaacgggtctcccagcatcaaactggacaactttgca
cccccaatgaagcctaaaattaaacgtctttcagaagtcccaacgttcgatgtcgctcca
agtcccttaaaaacgcgtcgtcaacgccaacaagaaggatctgcaccaaaaatgcccgca
aaaactaaagttaccaaaactacctcgttacccataagcaataccaagcctgaaacaagc
acaaaaaagtcaccatcgatcctaaaaactcaaacaagctcgaaaaaagacccaaattca
cgcaaatccgtttcattcgagagcccaaagccaagtacgagcaaaaaatcgagcggccca
cgtgggcatcaaaataaaaaacaaaaaattgtgattccaagcagtgacgacgaggatcta
tttgaaccggatatcgtcttcaacaagcctctcgtgaacaaaaatgtcgaaaaagtcaag
aaaatcgatcgtcgtatgttgtcaagtgacgaagatacgcctaaaagaccgggaaataag
aaaaatcatgtgaacgtttgggttgaagtttatgcggaaaaggaaaaacgttggattacg
gtcgatttatttaagggaaaagtcgattgcgtcgatgtaatttgccaaaacgcgacttcg
cccattacttatgtgcttgcatggaataatgacaactccttgaaggatgtttcgccgcgt
tattgcgaacattggaacacagtaacgcgaaaattaagagttgaaaaggaatggtgggat
gaaacaattcaaccttacttgtcgaaacacgtcacggaacgagataaagctgaaaataag
tattttgagaagattcattcgacgaaaccgatgccaactgcgatatcagacttcaaaaat
catccgttatacgccctcgaacgccatttactcaaatttgaggctctttatccgcctgat
gctcaaccaattggttggataaggaatgaacctgtttacccacgagattgtgtctacaca
ttactcacacgagaaaaatgggtgaaggaagctcgtgtcgtaaaactcaatgaggaacct
tataaaattgtcacatcaccaaaatgggacaaatatgcacaaaaaatcctcaaaaattgt
cccgtcgagctctttggaatttggcaaactgccccatatgagcctccaactgctgaaaat
ggcatcgttcctcgcaacgaatacggaaatgtcgaacttttcaaggaatgcatgttaccg
aagaagacagttcacttgaaatttgctggtttaaataaagtttgtaagaaattgaatgtc
gattgtgctccggctatcgttggattcgatttccataatggatggtcgcatcccgtgtac
gatggatttgttgtttgtgaggaatttgaagaacttgtcacgaatgcttggatcgaggaa
caagacgaattgatgaaaaaagaacgggaaaagatcgaaaaacgcgtttatggaaactgg
agaaaattaattaagggactgttgataaagaaacgtctgcaagccagatacaactttgaa
gcagatgatgaggaaattgaagaagaggaagaaaaaacttctaaaaagagtaaaaaataa
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