Culicoides brevitarsis: 134827320
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Entry
134827320 CDS
T10947
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
cbri Culicoides brevitarsis
Pathway
cbri03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cbri00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
134827320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cbri03021
]
134827320
03036 Chromosome and associated proteins [BR:
cbri03036
]
134827320
Transcription machinery [BR:
cbri03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
134827320
Coactivators
SAGA/TFTC/STAGA complex
134827320
Chromosome and associated proteins [BR:
cbri03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
134827320
STAGA complex
134827320
TFTC complex
134827320
SAGA complex
134827320
SLIK complex
134827320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
TFIID_NTD2
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_TEP1_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
NBCH_WD40
WD40_RFWD3
Beta-prop_SPT8
WD_LRWD1
Beta-prop_EIPR1
Beta-prop_WDR19_1st
Beta-prop_SCAP
Beta-prop_Vps41
Beta-prop_HPS5
Beta-prop_DCAF4
Beta-prop_WDR75_2nd
Ge1_WD40
eIF2A
Beta-prop_NWD2_C
YjhX_toxin
SLATT_fungal
Motif
Other DBs
NCBI-GeneID:
134827320
NCBI-ProteinID:
XP_063695991
LinkDB
All DBs
Position
1:complement(20288040..20290227)
Genome browser
AA seq
651 aa
AA seq
DB search
MTANKTDLLAVLQVLKRYNLKGTEELLKKEANLDETSTPQIANEEVTSVLAAYKSEGDPN
VYENSYLELRKFVEESLDIYRYELSMILYPVLVHMYIELLYNGHEDQAAQLMAKFGPEQE
YYYQDDLKKLAMVTRKDQISGNDLTETFKSNDFVIRISRDTLSLLKRHLHERKASVIMNI
VNEHLYFDLYEGVARNRQQCDATAGSMMGEAKRQDNKVKVYYGLLKEPDLQTVQVTAPIE
EDDDLDADDKPKKKKPKKDPLFSKKSKSDPNAPPIDRIPLPELRDVDKLEKLKALKEASK
RVALGPDSLPSVCFYTLMNAAYTVTCAEISEDSSLVAIGFSDSLIKVFSLTPGKLRELKA
ADALKEIDRDADDILVRMMDDKKPAETTRTFTGHAGPIYRCNFAPDRTLMLSCSEDCTIR
LWSLHTWTCLVVYKGHQYPVWDVRFSPHGHYFVSASHDRTARLWATDNHQPLRIFVGHLA
DVDCCIFHPNSNYVATGSSDRTVRLWDVVSGNHCRLMTGHKAQINTLCFSNCGKFLASGS
ADKRVLLWDLAHGHLIAALTGHTSSITSICFSRDGTVLTSASLDCSLKLWDFTKLCEDIS
GENINVSHNPDVKSGEPYLLRTFPTKASPIITLHFTRKNLLLAIGMLEYAQ
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgactgctaataagacagacttgctcgctgtcttgcaagttctcaaaagatacaattta
aagggcaccgaagaactcttgaaaaaagaagcaaatctcgatgaaacaagcacgccacaa
atcgccaacgaagaagtcacaagtgttctcgccgcctacaagagcgaaggcgaccccaat
gtctacgaaaactcctatttagagctccgtaaattcgtggaagagtctctcgacatttac
cgctacgagttatcgatgattttgtatcccgtacttgttcacatgtacatcgagttgctt
tacaacgggcacgaggaccaagcggcgcaattaatggcgaaattcggaccggaacaggaa
tattactaccaggacgacctgaaaaaactcgcaatggtgacacgaaaagatcagatttcg
ggaaatgatttgacggaaactttcaaatcgaacgatttcgttatccggatctcgcgagat
acgttgtcgttgctgaaaagacatttgcatgagagaaaagcctcggttattatgaatatc
gtgaatgaacatttgtatttcgacttgtatgaaggcgttgcacgaaaccggcagcaatgc
gatgccacagctggctcgatgatgggcgaggcgaaacgtcaggataacaaagttaaagtt
tattatggattactgaaggaacctgacctgcaaacggtgcaagtaacggcgcccattgag
gaagatgacgatttggatgcagatgacaagccaaaaaagaagaaaccgaaaaaagatcca
cttttttcgaagaaaagcaagtcagatccgaatgcgccgccaatagatcgcattccgttg
cccgaattgagggatgtggacaagctggaaaagcttaaagcgttgaaagaagcttcgaaa
cgtgtggctttaggtcccgatagtctcccgtcggtctgtttttacacgctgatgaatgcc
gcatataccgttacttgcgcggagatctctgaggactcgagtctcgttgctattggcttt
tcggactcgttaatcaaagttttttccttgactccgggtaaattgagagaattaaaggca
gcagatgcgctaaaagaaatcgatcgtgatgccgatgacattctcgttcggatgatggat
gacaaaaaacccgcagaaaccacgagaactttcaccggacacgcaggtcccatttatcgg
tgcaatttcgcacccgatcgaaccctcatgctttcatgctcggaagactgtacgatccgt
ttgtggtctctgcatacctggacttgcctcgttgtgtacaagggacatcaatatcccgtc
tgggacgtgcgtttttcgcctcacggacattatttcgtaagcgcttcacatgatagaaca
gctcgactttgggcaacggacaatcaccagccacttcgaatctttgtgggacacttggct
gacgtcgattgttgcattttccatccaaattcgaattacgtggcaaccggatcgagtgac
agaacagtcaggttatgggatgtcgtctcgggaaatcattgtcgcttgatgacaggccac
aaagcgcaaataaatactttgtgtttctcgaattgtggcaaatttttggcctccggatcg
gcagataagcgagttttgttgtgggatttggctcatggacacttgattgcagcgttaacg
ggtcacacatcgtcaattacgagcatttgcttcagtcgggatggaactgtgctgacatct
gcttccctggattgctccttgaagttgtgggattttacgaaattgtgcgaagatatcagc
ggggagaatataaatgtgtcccataatccggatgtcaagtcgggcgagccttatttactt
agaacgttcccaacgaaagcctcgccgatcataacgttgcattttacgaggaaaaattta
ctgctggcgattggaatgttggagtatgctcaataa
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