KEGG   Culicoides brevitarsis: 134827658
Entry
134827658         CDS       T10947                                 
Name
(RefSeq) replication factor C subunit 1
  KO
K10754  replication factor C subunit 1
Organism
cbri  Culicoides brevitarsis
Pathway
cbri03030  DNA replication
cbri03410  Base excision repair
cbri03420  Nucleotide excision repair
cbri03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cbri00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    134827658
   03410 Base excision repair
    134827658
   03420 Nucleotide excision repair
    134827658
   03430 Mismatch repair
    134827658
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cbri03032]
    134827658
   03400 DNA repair and recombination proteins [BR:cbri03400]
    134827658
DNA replication proteins [BR:cbri03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    134827658
DNA repair and recombination proteins [BR:cbri03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     134827658
SSDB
Motif
Pfam: RFC1 AAA_lid_RFC1 AAA BRCT AAA_22 AAA_14 Rad17 RuvB_N AAA_16 AAA_33 AAA_5 nSTAND3 RNA_helicase AAA_7 PTCB-BRCT AAA_30 AAA_18 AAA_17 NTPase_1 TIP49 Zeta_toxin BRCT_2 ABC_tran AAA_19 NPHP3_N
Other DBs
NCBI-GeneID: 134827658
NCBI-ProteinID: XP_063696478
LinkDB
Position
1:complement(27302176..27305846)
AA seq 977 aa
MSRDIRSYFSMGAAKKPKAPVDSPLKRKSVIALSDSDDDGKPKEQQKKASHHTKKRRVVD
SDDEEEEKKASKKEVKPKKEEKKQEKLKEVDPAAFFGNKEPLRVEKTVIPSSKKKKKDDL
FASDDEAELSMMDLDVSVAESPSKKKKENKTPPKKETPKKESSKKETPKKEKEVKTEKLT
PKKEEKPVKKEKSSPKVVKEEPKEEKPSTSKTPKGTPKTATKRKKPENEDEPVITDEERH
QRKVQAAILFRERQKHGGPTAHGSKEIPEGKPNCLAGMAFIITGELESQTREEAADLIKS
LGGRMMTTVSKKLSYMVVGELAGPAKIAKADEYGIPQINEDELLDLIREKSGIPKKNPVK
EEPKESPAKKIKKEESPKKVKKEEETKIPIKKEPEPSSSSSNIPKPPSKIDENSIAWVDK
YKPTNIKQIIGQQGPQSNCQKLINWLQKWDSNNDGKKKHARPNPWAKNDDGASFKAVLLS
GPPGVGKTTTAHLVCKELGYDIVEFNASDTRSKRLLQEEVATLLSNKSLNAYVHGTSKSA
SAKRVLIMDEVDGIGGNEDRGGAQELIQLIKTTHIPIICMCNDRNHQKMKTLVNYCFDLR
FSKPRVEQIRGAMMSVLFKEGMKIPKECLDEIISGTGNDVRQTLNHLAMYSASKDINASK
ESGDYKKEAKTAEKDVKIGPFDVARKVFDANEHKGLSLDDKLSFFFHDYNMASLFVQENY
LTVQPNAPKKTQMQLFAEVADSLSRGDMIEKRIRTDSAWSLLPVQGMYCSVIPGELLEGS
IGRINFPGWLGKNSKTMKRKRLAQEIHDHTRTCTSGSRLSIRLDYAQFLTKAIVDPLKQK
GMDGVPETLEVMKAYKLLREDIDSLVELSTWPKQKNPMDGIESKVKAALTRTYNKEVLPY
SFSALQNVKKKKVEVSEEYEGIGGDEEGLQDASGSEDEDDKLENNAFIKVKKPSAPKAAK
AGTSKEPKASSSKGKKK
NT seq 2934 nt   +upstreamnt  +downstreamnt
atgtcacgagacattcgatcgtacttttccatgggagctgcaaagaagcccaaagccccc
gtggactcgccgctcaagagaaagtcagtaattgctttgtccgacagcgatgacgatggc
aagccaaaagaacagcagaaaaaagcttcgcatcacaccaaaaagcgtcgagttgtggac
tccgacgacgaagaagaagaaaaaaaggcatcgaagaaagaagtaaaacccaaaaaggag
gaaaagaagcaagaaaaattaaaagaagtggatccagcagccttttttggcaacaaggaa
ccactgagagtggaaaaaactgtcattccgtcgtcaaagaagaagaaaaaggacgatttg
tttgcatccgatgacgaagcggaactgagcatgatggatttggatgtcagtgtcgccgaa
tctcccagcaaaaagaagaaggaaaataaaacgccaccgaaaaaggagactccgaagaag
gaaagttcaaagaaagagactccgaagaaggaaaaagaggtgaaaacagaaaaattaaca
cccaaaaaagaagagaaaccagtgaaaaaggaaaaatcttcaccgaaagtggtaaaagag
gagccaaaagaggaaaaaccaagtacatcaaagactcctaaaggcactccgaaaactgct
accaaacgtaaaaagcctgaaaatgaagacgaaccagtaatcaccgacgaagaacgccac
caacgcaaggtccaagcagcaattctcttccgcgaacgccaaaagcatggcggtccaacg
gctcatggcagcaaagaaattcccgagggaaaaccaaattgcttggctggcatggcattc
atcatcacgggcgaactcgaatcacaaactcgcgaagaagctgccgacctgataaaatcc
ttgggtggtcgaatgatgaccacagtctcgaaaaaactcagttacatggttgtcggagaa
cttgctgggcccgcaaaaattgccaaagccgatgaatatggaataccgcaaattaacgaa
gacgagttactggacttgattcgcgaaaaatcaggtattccgaagaaaaatccggtgaaa
gaggaaccaaaagagagtcctgcgaaaaaaattaaaaaggaagaaagtcccaaaaaggtg
aaaaaggaagaagaaacaaaaattccgattaaaaaagaacctgaaccgtcttcttcatcc
tcaaatattccaaaacctccttcaaaaattgatgaaaattccatcgcctgggtcgacaag
tacaaaccgacaaacatcaagcaaatcattggtcaacaaggtcctcaaagcaactgtcaa
aagttgataaattggctccaaaagtgggattccaacaacgatggcaagaaaaagcatgcc
cgtcccaatccatgggccaaaaacgacgacggcgcctctttcaaagccgttttactttcc
ggacctcccggagttggcaaaacaaccaccgctcacctcgtttgcaaggagctcggttat
gacattgtcgaatttaatgcctcggacactcgtagcaaacgtttgctgcaagaagaagtc
gccactttactctcgaataaatcactgaatgcctatgttcatggaaccagcaagtccgca
agtgccaaacgtgtcttaatcatggatgaagtcgacggaattggcggaaatgaggatcgt
ggcggtgcccaagagttaattcaactcatcaaaacgactcacatcccaattatttgcatg
tgcaacgaccgaaatcaccaaaaaatgaaaactttggtgaattattgctttgatttgcga
ttttccaagcctcgagtcgaacaaatccgcggggcaatgatgagtgtgttgttcaaagaa
ggcatgaagatcccaaaagagtgtttagatgaaataatttcgggaacgggaaacgatgtt
cgtcaaacgttgaatcatctggccatgtattcagcttccaaggacattaatgcgtcgaaa
gaaagtggcgattacaaaaaagaagcgaaaactgccgaaaaagacgtcaaaattggtcct
tttgatgtcgcgcggaaagtttttgatgccaacgagcacaaaggattgtctcttgatgat
aaattgagctttttctttcatgattacaacatggcatcactttttgtgcaggaaaattat
ctcaccgttcaaccaaatgccccgaaaaagacccagatgcagctttttgctgaagttgcc
gatagtttgagtcgtggcgacatgatcgagaagcgaattcgcacggacagtgcttggtca
ctgcttcccgtgcaaggcatgtattgctccgttattcccggagagcttctggaagggtcc
atcggtcgtataaacttccccggatggcttggaaaaaattccaaaacgatgaaacgcaag
cgtttagcgcaggaaattcatgatcacacacgaacttgcacttcggggtcccgattgtcg
atccgtttggattacgcacaatttttgaccaaagcgattgttgatccgctcaagcaaaaa
ggcatggatggcgtaccagagacattggaagtcatgaaagcttacaaattattgcgagaa
gacattgattccttagtggagctcagtacgtggcccaagcagaaaaatccaatggacggc
atcgaaagcaaggtcaaagcggctttgactcgtacttacaacaaggaagtgctgccgtac
tcgttctcagctctgcaaaacgtgaaaaagaaaaaagttgaagtttccgaggagtatgaa
ggaattggcggtgatgaagaaggacttcaagatgcttcgggatccgaagatgaggacgac
aaactcgaaaataatgcgttcattaaagttaaaaaaccctcagctccgaaagcggcaaag
gcgggcacgtctaaagagcctaaagcctcttcatctaagggaaaaaagaagtaa

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