KEGG   Culicoides brevitarsis: 134827726
Entry
134827726         CDS       T10947                                 
Name
(RefSeq) cleavage stimulation factor subunit 1
  KO
K14406  cleavage stimulation factor subunit 1
Organism
cbri  Culicoides brevitarsis
Pathway
cbri03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:cbri00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    134827726
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cbri03019]
    134827726
Messenger RNA biogenesis [BR:cbri03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     134827726
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 WD40_Prp19 Beta-prop_WDR3_1st WD40_CDC20-Fz WDR55 WD40_WDHD1_1st Beta-prop_EML_2 CSTF1_dimer Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_2nd ANAPC4_WD40 WD40_Gbeta Beta-prop_WDR36-Utp21_1st Beta-prop_CAF1B_HIR1 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_RIG_2nd Beta-prop_Aladin Beta-prop_TEP1_C Beta-prop_IFT140_1st Beta-prop_IFT122_1st WD40_RFWD3 Beta-prop_VPS8 WDR90_beta-prop_4th Beta-prop_HPS5 Beta-prop_WDR19_1st Beta-prop_NUP159_NUP214 Beta-prop_IFT140_2nd Beta-prop_EIPR1 Beta-prop_DCAF4 Ge1_WD40 Beta-prop_NWD2_C Beta-prop_WDR35_TULP_N Beta-prop_Vps41 Beta-prop_NOL10_N Beta-prop_SPT8 WD40_like Beta-prop_WDR75_2nd WDR54 Beta-prop_IP5PC_F Beta-prop_LRRK2 Frtz Beta-prop_IFT122_2nd Tricorn_2nd
Other DBs
NCBI-GeneID: 134827726
NCBI-ProteinID: XP_063696576
LinkDB
Position
1:complement(42295523..42297093)
AA seq 428 aa
MKDTEILDPTNTVKNREILYRLMISQLFYDGYHNLAVELTSIIRADPPCPPSDRLFHVMM
TGMANERKKKDEELASMEGTMGLDLEFETEGSALAPEPASYETAYVTSHKAACRAGCFTF
DGQLVATGSVDASIKILDVDRMLAKSAPEDLEPGRSEHGHPVIRTLYDHTDEVSVLEFHP
SEQILASGSRDCTVKLFDISKASVKKAHKVFTDCEAVRCVSFHPTGDYLAVGTNHSVLRV
YDISTGQCFVSPMASQHHKSEITCVKYAVTGKLYATGSTDGCIKIWDGVSGRCINTFIQA
HDGSEICSVVFTKNGKYLLSSGKDSLVKLWELNTSRCLIAYTGAGTTGKQEHSTQAIFNH
TEDFVLFPDEVTTSLCAWNSRNASRAHLMSLGHNGPVRHIVHSPTHAAFLTCSEDYRARF
WVRRQTSH
NT seq 1287 nt   +upstreamnt  +downstreamnt
atgaaggacacagaaatattggatccaacaaataccgtaaaaaatcgcgaaattttgtat
cgactcatgattagccaacttttctacgacggttatcacaatttggctgtcgaattaacg
agcatcattcgtgcggatcctccctgtcccccaagcgatcgtttatttcacgtaatgatg
acgggcatggcgaacgagcgcaagaaaaaagacgaagaactcgcttccatggaaggaaca
atgggtttagatctcgaattcgagactgaaggctccgcattagctcccgaaccagcaagt
tacgaaactgcttacgttacttcgcataaagcggcgtgtcgtgcgggatgttttacgttc
gatggacaactcgtggcaacgggaagtgtcgatgcgagtataaaaatcttggatgttgat
cgaatgttggcgaaatctgcgcctgaggatttagaaccgggtcgttcggagcatgggcat
cctgttataagaacactttatgatcacacagacgaagttagtgttttggaatttcatccg
tcggagcaaattttggcttccgggtcgagagattgcactgtgaagttgtttgacatctca
aaagcgagtgttaaaaaggcacataaagtttttacggattgtgaggcggtgcgatgtgtc
agttttcatccaactggagactatttggctgtcggaacgaatcattcggtattgagagtt
tatgatatctcgacgggacaatgtttcgtgagtcccatggcttcgcagcatcacaaatcg
gagataacttgcgtcaaatatgccgtcacgggaaaactttatgccacgggatcgactgat
ggatgcattaaaatctgggatggcgtcagcggcagatgcatcaacacatttattcaagcg
cacgacggctccgaaatttgtagcgtggttttcacgaaaaacggcaaatatctcttgtca
tcgggaaaagattcgctcgtcaagttatgggagctcaatacaagtcgatgtctcattgct
tatacgggcgccggaacaacgggcaaacaagaacacagcacacaagcgattttcaatcat
accgaagattttgtcttgttccccgatgaagtaacgacgtcgttatgcgcgtggaattcg
cgaaatgcatcaagagctcatttgatgtcactcgggcataatggtccagtgcgtcacatt
gttcacagtccaacacacgccgcattcctgacatgctccgaagattacagagcgagattc
tgggttcgaagacaaacgagccattaa

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