Culicoides brevitarsis: 134827759
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Entry
134827759 CDS
T10947
Name
(RefSeq) ATP-dependent RNA helicase DHX15 homolog
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
cbri Culicoides brevitarsis
Pathway
cbri03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cbri00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
134827759
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cbri03041
]
134827759
03009 Ribosome biogenesis [BR:
cbri03009
]
134827759
Enzymes [BR:
cbri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
134827759
Spliceosome [BR:
cbri03041
]
Complex A
U2 snRNP components
U2 related factors
134827759
Complex B
134827759
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
134827759
Ribosome biogenesis [BR:
cbri03009
]
Eukaryotic type
90S particles
Helicases
134827759
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
WHD_HA2
Helicase_C
DEAD
SRP54
AAA_19
nSTAND3
AAA_22
Cas3-like_C_2
ResIII
AAA_25
ATPase
ABC_tran
Flavi_DEAD
nSTAND_NTPase5
Pox_A32
AAA_7
T2SSE
Motif
Other DBs
NCBI-GeneID:
134827759
NCBI-ProteinID:
XP_063696627
LinkDB
All DBs
Position
1
Genome browser
AA seq
726 aa
AA seq
DB search
MSKRRIEVEDPYIKKMREEKGASSSSTSLGSAVSGGAVAKVAANTSLNPFTGIAYSANYH
TLYRKRITLPVFEYRADFMRLLAEHQRIVLVGETGSGKTTQIPQWCVEFAKSMGKKGVAC
TQPRRVAAMSVAQRVSEEMDVILGQEVGYSIRFEDCSGPKTLLKYMTDGMLLREAMSDPM
LEAYQVILLDEAHERTLATDILMGVLKEVIRQRPDLKLVIMSATLDAGKFQQYFDNAPLM
NVPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEDVEGDILMFLTGQEEIEEACKRIK
REMDNLGPEAGELKCIPLYSTLPPAMQQKIFEPAPPRKANGAIGRKVVVSTNIAETSLTI
DGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEKAY
KNEMQDNTYPEILRSNLGTVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALD
DDGNLTDLGAVMAEFPLDPQLAKMLIASCQHNCSNEILSITAMLSVPQCFVRPNEAKKTA
DDAKRRFAHIDGDHLTLLNVYHAFKQSNEDPNWCYENFVNYRSLKSADNVRQQLSRIMDR
FNLKRTSTDFTSREYYVNIRKALVQGFFMQAAHLERTGHYLTIKDNQIVQLHPSSCLDHK
PDWVIYNEFVLTTKNYIRTVTDVKPEWLIKIAPQYYDMNNFPQCEAKRQLELIQNRMESK
QFQKGF
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagcgacgaattgaagtagaggatccgtatataaagaaaatgcgggaagaaaag
ggcgcaagcagcagttcaacgtcactcggatccgctgtttcgggcggtgcggttgccaaa
gtcgctgcaaatacgagtttgaatcctttcacgggcatcgcttactctgccaattatcac
acgctgtatcgcaaacgtatcacattgcccgtgttcgagtacagagcggatttcatgcga
ttacttgcggaacatcaacgaattgtgttggttggcgagacgggcagtggaaaaacgacc
caaattccgcaatggtgtgtcgaattcgccaaatccatgggcaaaaagggagttgcttgt
actcaaccgagacgagtcgctgcaatgtcggtagcgcaacgtgtttccgaggagatggat
gtgatattgggacaagaagtcggctacagtattcgttttgaggattgttcgggaccaaaa
accttgttgaaatacatgacagacggtatgttgttgcgagaagcgatgagtgaccccatg
ttggaggcttatcaagtaattttgcttgacgaggctcacgaacgtaccttggcgacggat
attttgatgggtgtcttgaaggaagttattcgacaaagacccgatttgaagctcgttatt
atgtctgcgacactggatgccggcaaatttcaacaatatttcgataatgcgccgctcatg
aatgtacctggcagaacgcatcccgtcgaaattttttacacgcctgaaccggaacgcgat
tacttggaagctgcgattcgaactgtcattcagattcacatgtgcgaagatgtcgaaggg
gatattttgatgtttttgactgggcaagaagagatcgaggaagcatgtaagcgaattaag
cgtgaaatggacaatttgggacccgaagcgggagaattgaaatgtatcccgttgtattcg
acacttccgccggcaatgcaacagaagattttcgagccagcgcctccgcgtaaagcaaat
ggagcgattggaaggaaagttgtcgtttcgacaaatattgcagaaacgtctttgacaatt
gatggcgtcgtttttgtgattgatccgggatttgcgaaacaaaaagtttataatccacga
attcgagttgaaagtttgctcgtgtcgcctattagtaaggcaagtgctcaacagagagct
ggtagagcaggaagaacacgtcccggaaaatgtttccgattgtacacagagaaggcctac
aagaatgagatgcaagataatacttatccagaaattttgagatctaatcttggaactgtt
gtacttcaactgaaaaaactcggcatcgacgatttagttcatttcgattttatggatccg
ccagcgcctgaaacgctcatgagagctctcgagttactcaattacttggctgccttggat
gacgatggaaatttgacagatttgggcgctgtaatggctgaatttcccctcgatccgcaa
ttggcaaagatgttaattgcaagttgtcaacacaattgctccaatgaaattctgtccatt
accgcaatgttgtcggtgccgcaatgctttgtaaggccaaatgaagcgaagaagacagct
gacgacgccaaacggagatttgcgcacatcgatggcgatcatttgaccttgctgaatgtt
tatcatgcattcaaacaaagtaacgaagaccccaattggtgctacgagaactttgtcaat
taccgttcattgaaatccgccgacaatgtgagacaacagctttcgcgtatcatggatcgc
ttcaatttgaaacgaaccagcacggatttcacatcacgcgaatattatgtcaacatccgc
aaagccctcgtacaaggtttcttcatgcaagcggcacatcttgagagaacaggacactat
ctgacgatcaaagataaccaaattgttcagttgcatccctcgagttgtctggatcacaag
ccagattgggtgatttacaatgaatttgtactcacaaccaaaaattacattcgaactgtt
actgatgttaagcctgaatggctcatcaaaatcgctcctcaatactatgacatgaacaat
ttcccacaatgcgaggcgaaacgacagttagagttgatccagaatcgaatggaatcaaaa
caattccaaaaaggattctaa
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