Culicoides brevitarsis: 134827762
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Entry
134827762 CDS
T10947
Name
(RefSeq) transcription factor SOX-5-like
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
cbri Culicoides brevitarsis
Brite
KEGG Orthology (KO) [BR:
cbri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cbri03000
]
134827762
Transcription factors [BR:
cbri03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
134827762
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Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
SOXp
Motif
Other DBs
NCBI-GeneID:
134827762
NCBI-ProteinID:
XP_063696631
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All DBs
Position
1:6316625..6336071
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AA seq
467 aa
AA seq
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MNSIHQNMSLMNGANNNILSQAMKKPVDDHIKRPMNAFMVWSRLQRRKIAQENPKMHNSE
ISKRLGAEWKLLTEDEKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKALRREGYPYPMPY
PSVPVDALRAGYFGPGSAAYLSSHLSQSSPPTTQASLTSQMDVSKFALDRTAYLNSAAAN
ALYDTTKASAYSSAYLDPTSMLTKAYFDSKMYQDRANYAFDISKIYGGQQGSQQSQQSSQ
QNHHHHHHQNQFSNIDHIKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLT
EGQKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKTLVKSPTPNNISNNNNNNNNSQNNIS
VKDSPPQNTKYTYHNFDLTVPGISTRPPPLPFAPYTPYDFTFADLQARLNALYYHQCFGR
SSFNPMTESISPSPPSTYNKPPRSPPTISLPTTPPMHQTSPNGANVI
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgaacagtatacatcagaatatgtcgctaatgaatggagctaataataatattttatca
caagcaatgaagaaacccgttgacgatcacataaaacgtccaatgaatgcatttatggta
tggtctcgcttacaacgacgaaaaatcgctcaagaaaacccaaaaatgcacaactcggag
atatccaaacggttaggtgctgaatggaaattgctgacagaagatgagaagagacctttt
atcgatgaagcaaagcgtttacgagctctccatatgaaggagcatccagattacaaatat
cgaccaagacggaaacccaaagctttaagacgtgaaggatatccatatccgatgccgtat
ccatcagtccctgtagatgcattacgagctggctattttggtcccggaagcgctgcatac
ttaagcagtcatttgtcacagtcaagtccgccaactactcaggcatcattaacatctcaa
atggacgtctcaaagttcgcgcttgatcgaactgcttacttgaattccgctgctgcaaat
gctttatacgacacaacaaaggccagtgcttacagcagtgcatatctcgatccaacatcg
atgctaacaaaagcgtatttcgactcaaaaatgtatcaggatcgtgcaaattacgcgttt
gacatttccaaaatttacggagggcagcaaggaagtcagcaaagtcaacaaagcagccaa
caaaatcatcatcatcatcaccatcagaatcaattttctaacattgatcacatcaaacgc
cccatgaatgctttcatggtttggtcacgagggcagagacgaaaaatggcacaagacaac
ccaaaaatgcacaattctgaaatttcgaagcgacttggcgctgaatggaaattactcacg
gaaggacaaaaaagaccgtttattgatgaggcaaaaagattaagagctttgcacatgaaa
gagcatcctgactacaaatatcgtcctcgacgtaagccaaaaactctcgtgaaatctccg
acgcctaacaatattagtaacaacaacaacaacaataataattcgcaaaataatatttca
gtgaaggattcgcctccgcaaaatacaaaatacacatatcacaactttgacctaactgtt
ccaggcatatcaactcgccctcctcccttaccattcgcgccatatacgccttatgatttt
acatttgctgatcttcaagctcgtctaaatgcactttactatcatcagtgtttcgggaga
agttctttcaatccaatgacagaatcgatatcaccttcgcccccgtcaacgtataataag
cctccgagatcaccgccaacaatttctttgccaacgactcctccgatgcatcaaacttct
ccgaatggagcaaatgtcatttga
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