Culicoides brevitarsis: 134827832
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Entry
134827832 CDS
T10947
Name
(RefSeq) general transcription factor IIF subunit 1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
cbri Culicoides brevitarsis
Pathway
cbri03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cbri00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
134827832
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cbri03021
]
134827832
Transcription machinery [BR:
cbri03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
134827832
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
DUF3874
Motif
Other DBs
NCBI-GeneID:
134827832
NCBI-ProteinID:
XP_063696745
LinkDB
All DBs
Position
1:27724591..27728642
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AA seq
525 aa
AA seq
DB search
MSAAQGSSSTNPTVSVQEFTIRVPKNLKKKHHVMRFNGNLNVDFAQWKNVKMERENNMRE
FKGVEDDSPKFGAGSEYNKGLKEELRRRKFGIIAKRYRPDAQPWILKVGGKTGKKFKGIR
EGGVSDNAAFYVFTHAPDGAIEAYPLYEWYNFQPIQRYKTLSAEDAEQEFSNRKKTLNLF
ALMLRKRLKGEDDDTAGDLDDENAKKGGKGKKKDLTISEMDEWIDSDNDSDSDKSDKEKK
DPDSDVEVNKKKKNAPKKKRKNDVDDEAFEESDDGDEEGRELDYISDSSEADSLPAVPED
DDLQKNLESSESEEEEEKKSGEESEKSDEEKNKKDGKKDEGKETKDKKKKKKQKKKAGDD
KKDSSSDFSSDSSDSDNDNSNSKKKKKKDKNGKSGSNSRSGSPSLSQESNKRKGSSMPSD
LTSENSNSPVSTPAKKMKLDGPMIPPTFSGVVNSKDDYGITEDAVRRYLMRKPMTTTELL
TKFKNKKTGVSSDKLVETMTQILKKINPVKQTIKGKMYLSIKVPK
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctgcgcagggtagttcatcgacaaatcccacggtgtccgtgcaagagtttacg
atccgtgtgccgaaaaatttgaagaaaaagcatcacgtaatgcgcttcaacggcaatcta
aatgtcgattttgcacagtggaaaaacgtaaagatggaacgcgaaaataatatgcgcgaa
ttcaaaggcgtcgaagacgattcgcccaaatttggtgccggctcggagtacaacaaaggt
ctgaaagaggagttgcgacgtcggaaatttggcataatcgcgaaacgctatcgtccggat
gcgcaaccgtggattttgaaggttggcggcaagaccggcaagaaattcaaggggattcgg
gaaggcggcgtgagtgataatgcggccttttatgtgtttactcatgcgccagacggtgcc
atcgaggcatatccgctctacgaatggtacaacttccaaccgattcagcgatacaaaacg
ctgtcggccgaagatgccgaacaagagttctcgaaccgaaagaaaaccttgaatttgttc
gctttgatgttgcggaaacgcttgaagggcgaagatgacgacactgccggcgacttggac
gatgaaaatgccaaaaagggcggcaagggaaagaagaaagacctcacaatcagcgaaatg
gacgagtggatcgacagcgataacgacagtgattccgacaaaagtgataaggagaagaaa
gatcccgacagcgatgtcgaagtcaacaagaaaaagaaaaatgcgccgaagaaaaaacgc
aaaaatgacgttgatgacgaggcatttgaggaatctgacgatggagatgaagaaggtcgc
gaattggattacatttcagactcgagtgaagcagattcgttgccagctgtgcccgaagac
gatgatttgcagaaaaatctggagtcaagtgaaagtgaggaggaagaggagaagaaatct
ggagaagaatccgaaaaatcggacgaggaaaagaacaaaaaggatggcaaaaaggacgaa
ggcaaggaaacgaaagacaagaaaaagaagaagaaacagaagaaaaaggcgggagatgat
aagaaagactcgtcaagtgattttagctcggatagcagtgattctgataacgataacagc
aacagtaagaagaagaagaaaaaggacaaaaatggcaagagtggcagcaattcgcgttct
ggttcaccaagtttgtcacaagagtcaaacaaacgaaaaggatcaagtatgccatcagat
cttacctctgaaaacagtaacagtcccgtgtcgactcctgcgaagaagatgaagttagat
ggaccgatgattccacccactttttcgggagtcgtcaattccaaagacgattatggcatc
actgaagacgctgttcgtcgttacttgatgcgaaaaccgatgacaaccacggaactcctg
acaaagttcaagaacaaaaagactggcgtgagcagtgataaactcgttgagacaatgaca
caaattctgaaaaagataaatccggtgaagcaaactatcaagggcaagatgtacttgagc
ataaaagtgccgaagtag
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