KEGG   Culicoides brevitarsis: 134827849
Entry
134827849         CDS       T10947                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB3
  KO
K03011  DNA-directed RNA polymerase II subunit RPB3
Organism
cbri  Culicoides brevitarsis
Pathway
cbri03020  RNA polymerase
cbri03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cbri00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    134827849
  09124 Replication and repair
   03420 Nucleotide excision repair
    134827849
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cbri03021]
    134827849
   03400 DNA repair and recombination proteins [BR:cbri03400]
    134827849
Transcription machinery [BR:cbri03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     134827849
DNA repair and recombination proteins [BR:cbri03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      134827849
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_L
Other DBs
NCBI-GeneID: 134827849
NCBI-ProteinID: XP_063696772
LinkDB
Position
1:11860214..11861265
AA seq 279 aa
MPYANQPSVHITELTDENVKFIVEDTELSVANSLRRVFIAETPTLAIDWVQLESNTTVLA
DEFLAHRIGLIPLISDEVVERINFSRDCTCLDFCTDCSVEFTLDVKCTDEHTRHVTTADL
KSSDSRVLPVTSRHRDDDDNEYGEANDEILIVKLRKGQELKLRAYAKKGFGKEHAKWNPT
AGVCFEYDPDNSMRHTLFPKPDEWPKSEHTELDEDHFEAEYNWEAKPNKFFFNVESSGAL
KPEHIVIMGVQVLKNKLSNLQTQLSHETQQDALAIHPGI
NT seq 840 nt   +upstreamnt  +downstreamnt
atgccgtatgcgaatcagccatcagttcacatcaccgaactaactgacgaaaatgtcaaa
tttatcgtagaagacacggaattgagtgtggcaaacagcttacgccgagtatttatcgct
gaaactcccactctcgcgattgattgggtgcagttggaatcaaatacaacagttttggct
gacgaatttctcgcacatcgcatcggactcattccattgatctcggatgaggtcgttgaa
cgcataaatttcagcagagattgcacgtgtctcgacttttgcacggattgcagcgtcgaa
tttacgctcgatgtcaaatgcacagacgaacatacgcgtcacgtaacgacagcggatcta
aaatcgagcgattctcgcgttttgcccgtcacatcgaggcatcgcgatgacgacgataac
gaatatggcgaagcaaatgacgaaattttgattgtaaagttgcgtaaagggcaggaactg
aaattgcgtgcttatgcgaagaagggatttggtaaggaacatgccaaatggaatccgaca
gccggtgtgtgtttcgaatatgacccggataacagtatgcgacacacgttgttccccaag
cccgatgaatggccaaaaagtgaacataccgaattagacgaggaccatttcgaggcggaa
tacaattgggaagcgaagccaaacaagtttttcttcaacgtggagtcgtccggggctttg
aaacccgaacatattgtcatcatgggcgttcaggtgctcaaaaataaactttccaacttg
caaacgcaattgtcgcacgagacgcaacaagatgccttggcaatccatccgggaatctaa

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