Culicoides brevitarsis: 134827919
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Entry
134827919 CDS
T10947
Name
(RefSeq) protein polybromo-1 isoform X1
KO
K11757
protein polybromo-1
Organism
cbri Culicoides brevitarsis
Pathway
cbri03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cbri00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
134827919
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cbri03021
]
134827919
03036 Chromosome and associated proteins [BR:
cbri03036
]
134827919
Transcription machinery [BR:
cbri03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
134827919
Chromosome and associated proteins [BR:
cbri03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
134827919
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
BAH
HMG_box
HMG_WDHD1
HMG_box_2
DUF3461
Zap1_zf2
Motif
Other DBs
NCBI-GeneID:
134827919
NCBI-ProteinID:
XP_063696879
LinkDB
All DBs
Position
1:complement(26830758..26839782)
Genome browser
AA seq
1712 aa
AA seq
DB search
MSKRRIASRASSVATESSEEYITPDVAPSTRKRKKLDGSEQCQQCYDAIRNFKKEDGTTI
CDVFVRVPKRRTMPEYYEVVTDPIDLLKIQQKIKTDGYSSLTELQTDIELLVENAKAFYK
PDSEEYEDAVTLWEVFQTQKKKVEETNGSGKSSVEPVEDEPKGKTKPPTSSRPRRTTTLS
AQNGDDDDIDVYEELFAAVMTATDTDDRPLHTMFQLLPSKKLYPEYYQVIEHPIDLKFIA
NKIQTNAYENLTEMEKDLSQMTKNACLFNKPGSQIYKDAKTLRKIFTSKKIELESGRSIK
TQQNKKPSQALSAQIAALEDEQDGTDDENNEEEDEDEGPMRQLFDILYNTATTNGLNAGA
PLGESFWKLPNKRFNPDYYTTIKKPISMGQIRNKMIKGEYANITDMTSDLFLMLDNAKKW
FPSTNRVYKDAEKMRKLLNQKLVDGSLDQDDSDEENESEEEEESEEESSEDEQIIKKPTR
KSSIASSTPAKPLLPASGSKSVANNPAMKKKLLAIHEHLIDFTVDGRAICINFLEKPSKK
LYPDYYKVIAEPIDMQIIENRITQDKYETLDDVLADYQLLFSNCRKYNEVKSQIYQDANT
LEKALKKQIRELSGVPERKSIQRPHPSSPRTPKRPRIVTQRCQQLFETIRDYKEPKAKRQ
LSTIFLKLPSKADYPDYYEIIKHPIDMDRIQAKINKYNSLDEIVQDFALMFENACTYNEP
DSQIYKDALALQQICAQTKQKLRDMDNLIPDVQSAVQEILLSLFTAVYNLEDEEGRCLSD
SLAELPEYDQDGDEGDKKVRAISLDLIKRRLDKGLYKRLDAFQEDLFMVLDRARRLSRTD
SQVFEDSIEMQLVFLKKRDELCKNGDILQSPALLYTISQFNSAVEELRQSKQLEEQKDEA
PSTEEETSQEPLNVQEPGESMTIDEQKYSPGDFVYYELPENDVPGIIYITRLYTDSENVQ
MMEGNTFFRPYETYHIPTRRFMEQEVFKTDQHLSVPLSKIKGRCFVMCIRDYIQKKPEGF
EDKDVYVCESRYQTRARSFKKIKIWNNFNADVRFTTREEPLEINRVQSVFKNKSKEKEAP
KEEINFELDLALDTLEKQRPNVVLNVEGAEDGNTYYEQFNTVAAGVVKTGDFVYVATEAG
KQCVAQICSIWESKEGKSFFRGPWLLNPLEIPSSLIQTCYKQELMLSTVQETTQTASIVG
RCCVLEYLDYSTRRATEIPESDVFICESIYDEMKKQLNKISQPGAIRKFTHSKSVTPDEI
YHFKRAITPQKDMKIENGELVCVNDTSATEDDLDASLPDTPNNSQSSYISTPNNKNKPGG
RHNRGKVVTGYILYSSEQRKDRCELNPGMSFGEISRMLGDEWRNMDQKDRSVWEDKAAKL
NEAAKIKWREENAHLMNQPPDPNALTPGQGFLQNRENPIPNQIFDCRWRKCDFQFEDPAD
LLDHCITEKDGCLQRHLNQTDEKPEFYCLWRSCVRFKRGAPPFPNSMRLLKHVRDIHVYK
HMGKMVKPHDRNKNFVPRRTPLLPKPKIENDLLMSPLSHKQYMPPPPHQQPHMTHQIPNQ
MGYYPPQQQPGQQQFMQHPAYQPYANGQQMLTQVPNQTAFAPQMQQPSLLQFAAPQPDPL
FVSVPPRPQRVLHSDAYIKYIEGLQANTPSITPYERAIEATEMETAPPLPVSRLPGHWLG
KAGREKPDDVVNALWNLRNYMMKDVVQLYKSY
NT seq
5139 nt
NT seq
+upstream
nt +downstream
nt
atgagtaagcgtaggatagcgagtcgcgctagttcagtggcgactgagtcatcggaggag
tatatcacacctgatgttgcaccctcgacacgtaaacggaagaaactcgatggaagtgaa
caatgtcagcagtgctacgacgcgatccggaactttaagaaggaagatggcacgacaatt
tgcgatgtttttgttcgtgtgccgaagcgtcgaacgatgcccgagtactatgaagtcgtc
acagatcccattgacttgctaaaaatccagcagaaaatcaaaacagacggatattcgagc
ttaactgaactgcaaacggacatcgagttgctggtagagaacgccaaggccttctacaaa
cccgattccgaggaatatgaggacgccgtaacgctctgggaagtattccagacgcaaaag
aagaaagttgaagagacaaatggcagtggcaaaagttccgtagagcctgtggaagacgag
ccaaagggaaaaacaaagcctccaacgagttctcgacctcgaaggaccacaacattgagc
gcgcaaaatggcgacgacgacgatatcgatgtttatgaagaacttttcgctgctgtgatg
accgccacagacaccgacgatcgaccgttgcacacaatgttccaattattgccatcgaag
aagctctatccggagtactatcaggttatcgagcatccgatcgacctgaaattcatcgcc
aacaaaatccaaacgaatgcctatgagaacttgactgaaatggaaaaagatttgtcgcaa
atgacaaaaaatgcgtgtctcttcaacaaaccgggatcgcaaatttacaaagacgccaag
acgttacggaaaatatttacttccaagaaaatcgagttggagagcggaagatccatcaag
acgcaacaaaacaagaagcccagtcaagcgctgagtgctcaaattgccgccttggaagac
gaacaagatggcactgatgacgaaaataacgaggaagaagacgaagatgaaggtcccatg
agacaattgttcgacattttgtacaacacagcaacaacaaatggtcttaatgcaggcgcc
ccacttggcgagtcattttggaagttgccgaacaagagattcaatccggactactacaca
accatcaaaaagccgatttccatgggacagattaggaataagatgatcaaaggcgaatat
gcgaacattaccgacatgacttctgatctctttttgatgttggacaatgcgaaaaagtgg
tttccatcgactaatcgagtttacaaggacgcagaaaagatgagaaaactcttgaaccaa
aaactcgtcgatggaagtctcgatcaagacgactccgacgaggaaaacgagtccgaggaa
gaagaggaaagcgaagaagagtcatcagaagatgaacaaatcatcaagaaaccaacaaga
aaatcatcgattgcctcgagtacgcctgcaaaacccctcttgcctgctagtggaagcaaa
tctgtagcaaacaatcccgcaatgaagaaaaaattactggcaattcacgaacatttaatc
gacttcacagtcgatggacgtgccatttgcatcaatttcctggaaaaaccatcgaaaaaa
ctgtatcccgactattacaaagtcatcgcggagccaattgacatgcaaattatcgaaaac
cgcataacgcaagacaaatacgagactttagatgacgttcttgccgattaccaacttttg
ttttcgaattgtcgcaaatataacgaggtcaagtcacaaatttatcaagacgctaataca
ttagaaaaagctctgaagaaacaaattcgtgaactaagtggggtcccggagcgaaaatct
attcaacgaccgcatccgtcatcgcctcgaacgccaaaacgaccgagaattgtgacgcaa
cgatgccaacaacttttcgagacaattcgcgattataaggaaccaaaggcaaaacgacaa
ttgtcgacgattttcctcaagttgccatcaaaagctgactacccggattattatgagatc
atcaagcatcccatcgacatggatcgaattcaggcgaaaatcaacaagtacaacagcttg
gacgaaattgtgcaggattttgcattgatgttcgaaaatgcatgcacctacaacgaacca
gactcccaaatttacaaagatgctctcgcattgcagcaaatttgtgcgcaaaccaaacaa
aaactgcgcgacatggataacttgattccggacgtccaatctgccgtgcaggagattttg
ttgtcactttttacggcagtttacaacttggaggacgaagagggacgttgcctgagtgat
tctttagccgagttgcctgaatacgatcaagacggggacgaaggtgacaaaaaagttcga
gcaatttcgttggatttaatcaaacgtcgtttggataagggactttacaaacgtttggat
gcatttcaagaagatcttttcatggtgcttgatcgcgcacgacgactttcacgcaccgat
tcgcaagttttcgaagattcgatcgagatgcagctcgttttcctgaaaaaacgagacgag
ttatgcaaaaatggagatattttgcagtcaccagcccttttgtacaccatttcacagttc
aatagtgccgtcgaggagttgcgtcaaagcaaacagctcgaagaacaaaaggacgaagcg
ccatccacggaagaagaaacgtcgcaagaaccgctaaatgtgcaggagcccggcgaaagt
atgacaattgacgagcaaaagtattcgcccggtgactttgtgtactacgagttgccggaa
aatgatgttcctggaataatttacataacgcgcttgtatacggactctgaaaatgtccaa
atgatggaaggaaacacgtttttccgaccgtacgaaacatatcatataccgacgcgacgc
tttatggagcaagaagtcttcaaaacggaccaacatctctcggtgccactgagcaaaatc
aaaggcagatgcttcgttatgtgcatccgcgactacattcaaaagaaacccgagggtttc
gaggacaaggatgtctatgtgtgcgaatctcggtatcagacacgtgccagatccttcaaa
aaaatcaaaatttggaacaatttcaatgcggatgtgcgattcacgacacgcgaggagcct
ttggagataaatcgggtgcaatctgtgttcaaaaataagtcaaaggagaaagaagcaccc
aaagaagaaattaattttgaattggatctcgccttagatacgctcgagaagcagcgacca
aacgtagttttgaatgtagaaggtgccgaagatggaaatacgtactatgagcaatttaat
acggtggctgctggtgttgtgaagactggagattttgtctatgtggctaccgaagctgga
aaacaatgtgttgctcaaatttgttccatttgggagtcaaaagagggaaaatccttcttc
cgtggaccttggctcctaaatcccttggaaattccatcgtcactcatccagacgtgctac
aaacaagagctcatgctttcgacagtacaggaaaccacgcaaactgcctccattgtgggt
cgttgttgcgttctagagtaccttgactactcgacacgtcgtgccacggagatccccgag
tcagatgtcttcatttgcgagtccatttacgacgaaatgaagaagcaacttaacaaaatc
tcgcaaccgggtgccattcggaagtttacgcactccaaaagtgtgacgcccgacgaaatt
tatcacttcaaacgggcgattacgccgcaaaaagacatgaaaatcgaaaatggggagttg
gtatgcgtgaacgatacgtcagcgacggaggacgatttggatgcaagtctgcccgatacg
ccaaataattcgcaatcgtcatacatttcgacgccgaacaacaaaaataagcccggcgga
cgacataatcgaggaaaagttgtcaccggatatattttgtactcgagtgagcagcggaag
gatcgatgcgaattgaatccaggcatgtcatttggggagatttcgcgcatgttgggcgac
gaatggcggaatatggatcagaaagatcgctccgtgtgggaagataaggcggcaaaattg
aatgaagctgccaaaattaagtggcgcgaagagaatgcgcatttgatgaatcaaccgcca
gacccgaatgccttgacaccgggacaaggattcttgcaaaatcgtgaaaatccgatacca
aatcaaatatttgattgtcgttggcgcaaatgcgacttccagttcgaagatccggcggat
ttgttagatcattgtatcaccgagaaagatggctgcctgcaaagacacctgaaccaaacc
gatgaaaaacctgaattttattgcctttggcgtagttgtgtaagatttaagcgaggtgct
ccgccattccccaactccatgcgacttctgaagcacgtacgagacattcacgtgtacaaa
cacatgggaaaaatggtcaaacctcatgatcggaacaaaaatttcgtgccacgccgaacg
ccacttttaccaaagcccaaaatcgagaacgatttgctcatgtcgccgttgtctcacaag
caatacatgccgccgccgccacaccagcaacctcacatgacacaccaaataccaaaccaa
atgggatactatccgccgcaacaacaaccgggccagcaacaatttatgcaacatcctgca
tatcagccgtatgccaatggacagcaaatgctcacgcaagtacccaatcaaacggcattc
gctccgcaaatgcaacaaccgtctttattgcaatttgctgctcctcaacctgacccgtta
tttgtgagtgttcctccacgaccacagcgagttttgcattcagatgcctatatcaaatac
attgaaggtctccaagcgaacacgccgagcataacgccctatgaacgagcaatcgaggct
accgaaatggagacagcacctccattgccagtttcgcgcttaccgggacactggctcggc
aaagcaggacgcgagaaaccggacgatgtcgtaaatgccctctggaatttacggaactac
atgatgaaagatgtcgtacagctgtacaaaagttactag
DBGET
integrated database retrieval system