Culicoides brevitarsis: 134827923
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Entry
134827923 CDS
T10947
Name
(RefSeq) ATP-dependent RNA helicase Ddx1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
cbri Culicoides brevitarsis
Brite
KEGG Orthology (KO) [BR:
cbri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cbri03041
]
134827923
03016 Transfer RNA biogenesis [BR:
cbri03016
]
134827923
Enzymes [BR:
cbri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
134827923
Spliceosome [BR:
cbri03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
134827923
Transfer RNA biogenesis [BR:
cbri03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
134827923
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
SPRY
Helicase_C
ResIII
LpxI_N
Rgr-1_C
Band_7_1
Motif
Other DBs
NCBI-GeneID:
134827923
NCBI-ProteinID:
XP_063696883
LinkDB
All DBs
Position
1:complement(1421679..1429220)
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AA seq
726 aa
AA seq
DB search
MTAFEEFGVMPEIGKAVDEMDWLLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLPI
LQIVWETLKDLKEGKGKSGGDGVTIPPWTMSFFDRGNSMAITPDGMRCQSRDFKEWHGCR
CTTGVANTGRYYFEATVEDEGLCRVGWSTQKASLDLGTDKWSFGFGGTGKKSHNRQFDNY
GEAFGKNDVIGCLLDLVRLEVTFTKNGQNLGVAFKVPDHLRNETFYPAVVLKNAEMSFNF
GNNPFKHQIPEGFVAVNKVEEQNKKINPFASANAAPSEFVQRPNAPQAIIIEPSRELAEQ
TFSQLQKFKRYLKDPAINELLLIGGVSVKDQMAKLQQGVDIIVATPGRLEDLINNGYVLL
THCRFFVLDEADGLLSQGYGQLIENLHKQIPKITSDGRRLQMIVCSATLHSFDVKKMADK
LMHFPTWVDLKGEDAVPDTVHHVVCLVDPQKDTRWQNLRNHVQTDGVHAKDNVRPGNNTP
ETLSEAVKLLKGEYVVKAIEEHKMDRAIIFCRTKIDCDNLEKYLRFVGGERFSCVCLHGD
RHPKERKDNLEKFKQQKVKFLICTDVAARGLDITGLPFAINVTLPDEKANYVHRIGRVGR
AERMGLAISLVATVPEKVWYHGQWCSSRGKNCWNTNLTDVKGCCIWYNEKHYLAEIEDHL
TMTITQISPDLKVPLNEFDGKVVYGEKRINKGTGYKDHVAQLVPIVKQLADLEAQAQQHF
LKRLKV
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgacagcttttgaagaattcggtgtcatgccagaaatcggaaaagccgtcgacgaaatg
gattggcttctcccaactgacgtacaagcggaagctattcccttaattctcggcggaggc
gacgttttaatggctgctgaaaccggaagcggcaaaactggagccttttgtttgccaatt
ttgcaaattgtgtgggaaacattgaaagatctgaaagaaggcaagggcaaatcaggcgga
gatggcgtaacaatccctccgtggaccatgtcgttcttcgatcgtggcaattcgatggca
atcacgcccgatggaatgcgttgtcaatcgcgcgacttcaaggaatggcatggatgtcgt
tgtaccacgggcgtcgcgaacacaggacgttattatttcgaagcaactgtcgaagacgag
ggattatgtcgtgttggatggtccacgcaaaaggcatctctcgatttggggacagataaa
tggagttttggctttggcggaaccggaaaaaagtctcataatcgccaatttgacaattat
ggagaagcttttggcaaaaatgatgttattggatgtcttctggatttggtaaggcttgaa
gtgacgttcacgaagaacgggcaaaatctcggcgtggcgtttaaagtcccggatcacttg
agaaatgagactttttatccagctgtcgttctaaaaaatgcggaaatgtcatttaatttc
ggaaataatccttttaaacatcaaattcctgaaggatttgtcgccgtgaacaaagttgaa
gagcaaaacaagaaaataaatccttttgcgtcggcaaatgctgctccgagtgaatttgtg
caacgcccaaacgctcctcaggcaattattatcgagccatctcgtgaattggcggaacaa
actttttcccaattgcaaaaatttaagagatacttgaaagatcccgccataaatgaactt
ttgctgatcggaggcgtctccgtaaaagatcaaatggcaaaattacaacaaggagtcgac
ataattgtcgctacgccgggtcgtttggaagatctcatcaacaacggatacgttcttctc
acccattgtcgctttttcgtacttgacgaagcagatggcttgttatcgcaaggttacggg
cagctaattgaaaatcttcacaaacaaattcccaaaatcacgtcagatgggcgtcgtttg
cagatgattgtctgttccgcgactctccattcgttcgatgtcaaaaaaatggctgacaaa
ttgatgcattttccaacgtgggtcgatctgaagggagaagatgccgttcctgacacagtt
catcacgtcgtttgcctcgttgatccgcaaaaagacacgagatggcaaaatctgaggaat
cacgtgcaaactgatggcgttcatgcgaaagataacgttcgcccgggaaataatacgccc
gaaacgttgtcggaagcggtgaaattgctgaaaggagaatatgtcgtgaaggcaattgaa
gagcacaaaatggatcgagcgattattttttgtcgcacgaagatcgattgcgataatttg
gagaaatatttgcgatttgtgggaggcgaaagattttcgtgtgtttgtttgcacggagat
cgtcatccgaaagagagaaaagataatttggaaaagtttaaacagcagaaagtaaagttt
ttgatttgtaccgatgttgctgctcgtggtttggatattacgggattgccgtttgcgatt
aatgttacgttgcctgatgagaaggcgaattatgtgcatcgcattggtcgagtaggtcgt
gccgaacgcatgggcttggcaatttcgttagtagcaactgtccccgaaaaagtttggtat
cacggacaatggtgttcatcgcgcggtaaaaactgctggaacacaaatctcactgacgtc
aaaggttgttgcatttggtacaacgaaaagcattatttggcagaaattgaagatcatctc
acgatgacaatcactcaaatttcgcctgatttgaaagtcccgcttaacgaatttgacgga
aaagtcgtgtacggcgagaaacgcatcaacaagggaaccggctacaaagatcacgtcgct
caattggtaccgatcgtcaaacaactcgccgacttggaggcacaagcccaacaacatttc
ctcaaaagattaaaagtttaa
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