Culicoides brevitarsis: 134827971
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Entry
134827971 CDS
T10947
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 6 isoform X1
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
cbri Culicoides brevitarsis
Pathway
cbri03015
mRNA surveillance pathway
cbri03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
cbri00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
134827971
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
134827971
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbri03019
]
134827971
Messenger RNA biogenesis [BR:
cbri03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
134827971
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSLD_CPSF6
RRM_1
Motif
Other DBs
NCBI-GeneID:
134827971
NCBI-ProteinID:
XP_063696960
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Position
1:83898..89396
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AA seq
635 aa
AA seq
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MAESGAGVDAIDIYGDDLNEDFNQNDDFGGDGADLYDDVLAAPTSTGNGNGPAISQQGDN
SQASVAPIDRLDEVESNGSGYNNNMNHLQRRHQLYVGNLTWWTTDQDITDAVAQIGVSDF
QEVKFFENRANGQSKGFCVISLGSEGSMRMVMERLCKKDLHGQNPVVTLPTKQALNNFEA
QQKTRPTPPQGPSNGPQGGNQGMPPRMQGPPMQGGPRPMMNPNGPPGNFRPMHPGMQGPP
GGNMGGMPPRMQGPPMGHPQNMGPNMGPNQGGMPPRFNNQGNWNGPRPNGPMRGPMGPNG
PQQRPPMFQGGPPRGPWPRGPMQGPPGPFQGNMQGPPGNMGGMPPRMGGPGNPMGNPGGP
APHVNPAFFNQNQGPHPVPNPSGGHPGGPQQQNMPPQNHPYNQGPNHRGNWPPVNNSVNK
PGGPNSGSFPEQAAVPPAPQLSEVEFEEIMTRNRTVSSSAIARAISDASAGEYSSAIETL
VTAISLIKQSKVAHDERCKILISSLQDTLNGIETKSYSRRERSRSRERSHRHQRRERSRD
RGYRDRSRERRERGSRERDRYRGSSRGDREVREKTRSKERERGNTGDYRESDSRHSRSRN
KSPDASGENNYESSRYRSSDRDRERRDERERERRH
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaagcggggctggagttgatgctatcgacatttatggggacgatttgaacgaa
gacttcaatcagaatgatgattttggcggtgacggagcagatttgtacgatgatgttctc
gcagctccaacaagcacgggaaacgggaatgggcctgctatctcgcaacaaggcgataat
tcacaagcaagcgttgctcccattgatcgtctcgatgaagttgaatcgaatggaagcggt
tacaacaacaatatgaatcatttgcaacgacgacatcaattgtatgtcggaaacttaaca
tggtggacaacagatcaagacattacagatgctgttgctcaaattggcgtttctgacttt
caagaagtaaaattctttgaaaatcgtgcaaacggacaaagtaagggattttgcgttatt
tctctcggatctgaaggcagtatgcgaatggtaatggaacgtttatgcaaaaaagatttg
catgggcaaaatcctgttgttaccttaccaacgaagcaagcgctcaataactttgaggcg
caacaaaaaactcgcccaactcctccacaaggtccatcaaatggacctcaaggaggtaat
caaggaatgcctcctcgtatgcaaggacctccaatgcaaggaggcccgcgcccaatgatg
aatccaaatggtcctccaggtaactttagaccaatgcatccgggaatgcaaggaccgccg
ggaggaaatatgggaggaatgcctccgagaatgcagggacctccaatggggcatcctcaa
aatatgggccctaatatgggtccaaatcaaggaggaatgcctccaagattcaataatcaa
ggaaattggaatgggcctcgcccaaacgggcctatgagaggaccaatgggaccaaatgga
cctcaacaacgccctccaatgtttcaaggaggccctcctcgaggtccatggcccagagga
ccaatgcagggacctcccgggccttttcaaggcaatatgcaaggccccccgggaaatatg
ggaggaatgccgccaagaatgggaggtcccggaaatccaatgggaaatcccggaggccct
gctcctcatgtcaatcctgcattctttaatcaaaatcaaggtcctcatcctgttccgaat
ccttcaggaggacatccaggaggcccgcaacaacaaaacatgcctccccaaaatcatcct
tacaatcaaggaccaaatcatcgcggaaattggcctcctgttaacaattctgtcaacaaa
cccggaggacctaattcaggaagctttccagagcaagctgctgttcctcctgcgccgcaa
ctcagcgaagttgaattcgaagaaattatgacgcgaaatcgtacagtcagtagttcagca
attgcacgagcaatttccgatgcaagtgcaggagagtattcaagtgcgatagaaactctc
gttacggcaatctcactcattaaacagagcaaagtagcacacgacgaaagatgtaagata
cttattagctcgttgcaagatacgctaaatggtattgagacgaagagttatagtagaaga
gaacgttcgagatcacgagaaagatcacatcgacatcaaagacgagaacgatcaagagat
cgtggttatcgtgacagatcaagagaacgccgagaaagaggatcgcgtgaacgagaccgt
tatcgtggctcaagccgaggagatcgagaagttcgtgaaaaaactcgcagcaaagaacgt
gaacgtggaaacacaggagattatcgcgaatctgatagtcgtcattcaaggtcccgtaat
aagtcacccgatgcatctggcgaaaacaattacgagtcgagcagatatcgttcatcggat
cgagatcgcgaaagacgagacgaacgtgaaagggaacgtcgtcattaa
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