Culicoides brevitarsis: 134827975 Help Entry 134827975         CDS       T10947                                  Name (RefSeq) DNA repair protein RAD50   KO K10866   DNA repair protein RAD50 [EC:3.6.-.-] Organism cbri  Culicoides brevitarsis Pathway cbri03440   Homologous recombination cbri03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:cbri00001]  09120 Genetic Information Processing   09124 Replication and repair    03440 Homologous recombination     134827975    03450 Non-homologous end-joining     134827975  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:cbri03032]     134827975    03400 DNA repair and recombination proteins [BR:cbri03400]     134827975 DNA replication proteins [BR:cbri03032]  Eukaryotic type   DNA Replication Termination Factors    MRN complex     134827975 DNA repair and recombination proteins [BR:cbri03400]  Eukaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     MRN(MRX) complex      134827975     BRCA1-C complex      134827975    NHEJ (non-homologous end-joining)     MRX complex      134827975 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  AAA_23 Rad50_zn_hook SbcC_Walker_B SMC_N AAA_15 AAA_21 AAA_29 Zf_2nd_IFT121 AAA_16 Motif Other DBs NCBI-GeneID:  134827975 NCBI-ProteinID:  XP_063696962 LinkDB All DBs Position 1:24574452..24578939 Genome browser AA seq 1303 aa AA seqDB search MSTVSKLEIHGIRSFGIHSGDEQRITFYSPLTLIVGQNGCGKTTIIECLKYGVTGDLPPN SDNGKSFVHNTRMACASEAIGKVKLQVKDIHGNKTTIDRSHKVTVKARGGKVTANAMNTC VTHETNDGKQATLTRRKEDATTEMCRAMGVSRAIINNVIFCHQEDSNWPLEGDAKVKKNF DEIFGTSDYNKVLEELNKKMKEREIRKKLLQEELKLKKHIKMQADQLSAKLARFELSIAK NKSEITEIEEKLKPIRSRIVEISERECKASEFYTQEIKLKEKILANENSQKTFKNRITNY FEGDIPSLQQEIRDFQNNVSKVKDENEIVDVQIVELKQNNDRNEMKIRKIEQDRIQWQQM QQQEQEKVAERAQFLREIGPKVELLVPSEIENEPNTVAKTLILQIKDKVKEKDSTLKKMK ESHEEMERKFQEKVDMTRDKKTKANAAIASKMSEIKKNEAEMSELESRANKIEASATKIK ELEKKIEKHEQEFIAWTEQQRFSEQEADISNMKTRRDTIQKEADELDDKIDQLSTVANIF NEIQFKEKQSANFETEFKRIKNKHADNLSRIFPNKTIERDFKREVQRRFDQLAASVKEMS NKLNDKQRILLQAKTKHQHLRNSLKDKEDELKRLDESIYNQCQSEEYVEVKTRVKEKVEK LRAELGANRASETLFKKYIADLSDRSCCPLCHNDMTGSGKDDLIEELTTKVQSLPEKVLQ QQQNLMSEERKLEDLLKLGPILERAKKLREDTINLKDEIRKLDDTMKEMQCEIDDIEMCL ASPEEEKSIANIMLADMNSLDRYKSEIERHQNDIQSLRETLPSNQANENLEEIKTRKKNL QDELRELRAKLDVSQRNLDMGKQMQEEMQRKRNTLLQLKFELQESAQSVPQLRQRVEQLK SQIENARQELIQLNHELDIAKNDLELLETEKQKEKAKNKSIFDEASIEKQQIDQLFRDIC RCNDEISQFETMGLKEKLEELKQALTQRLDEKTKLQNELKTLEEKSKSLNDTIAKQEVLE RDLKENLDLKQAEREHEELQRQLKELELDLGDLDFSKLRREKDRLQKEDDEMVAKRSVIY GALSKEQEQAKEYQAELNKSDFKDSFRKYINTYHELRLIELLISDIKKYRSALDVALTKY HQEKMCQINQSIRGLWQEIYRGNDIDYIEIRTEAPESSSSRRNFQYRVVQVKNNTELDMR GRCSAGQKVLASLIIRMALSETFSTNCAVMALDEPTTNLDQANIASLCDAIGRIIQDQQN FGHFSWIIITHDETFLQILAPYLEASYRVSRNFEGKSVITKID NT seq 3912 nt NT seq  +upstreamnt  +downstreamnt atgtcgacagtcagcaaattagaaatacatggtatacgaagttttggtattcatagtggg gatgaacagcggataactttttattcgccactgacattgattgtcggtcagaatggatgt ggaaagacaacaattatcgagtgcttaaagtatggagtaaccggtgatctgcctccgaat tcagataatggaaaatcctttgttcataacaccagaatggcatgtgcgtccgaggcaatt ggcaaagtaaagttgcaagttaaggatattcatggcaacaaaacgaccattgatcgaagt cacaaagtcacagtgaaagcacgtggaggaaaggttacggcaaatgcaatgaacacttgt gtcactcatgagacaaatgatgggaaacaggcgacattgacacgtcgcaaggaagatgcg acaacggaaatgtgtcgagcaatgggagtatcaagagccattattaacaacgttatattt tgccatcaagaagacagtaattggcccttggaaggcgatgccaaagtaaagaaaaacttt gatgagatttttggaaccagtgactacaacaaggttcttgaggaactcaataaaaagatg aaggaacgtgaaattagaaaaaaattgttgcaagaagaattgaagctgaaaaagcacatt aaaatgcaggcagatcaattaagtgcaaagctggcacgtttcgagttatctatagccaaa aacaaatccgaaataactgaaattgaagaaaagctaaaaccaattcgaagtcgcattgtc gaaatttctgaaagagagtgtaaggcatcggaattttatacgcaggaaatcaagctaaaa gaaaaaatcctggcaaatgaaaacagccaaaagacattcaaaaatcgcattacaaattat ttcgaaggtgatattccgtcgttgcaacaagaaatccgtgattttcaaaacaatgtgtca aaggtcaaggatgaaaacgaaatcgtagatgtacaaattgtagagttgaagcaaaataat gatcgcaatgaaatgaaaattcgaaaaatagaacaagatcgcatccaatggcaacaaatg cagcaacaggaacaagaaaaagttgctgaacgcgcacaatttttgcgggaaataggacca aaagtagagctccttgtgccaagcgaaattgaaaacgagccgaacactgttgcaaaaact ctaattttacaaatcaaagacaaggtaaaagaaaaggactccacattgaagaaaatgaag gaaagtcacgaggaaatggaaagaaaattccaagaaaaggttgatatgactcgtgacaaa aagaccaaagcaaatgcggcgattgcatcgaaaatgagtgaaatcaagaaaaacgaagca gaaatgagtgaattagaatcaagggccaataagattgaagcaagtgcgacaaaaattaag gaacttgagaaaaagatagaaaaacatgagcaagaattcattgcatggactgagcaacaa cgattcagtgaacaagaagcggatatcagtaatatgaagacacgccgtgataccattcaa aaagaagccgatgaattagatgacaaaattgaccaacttagcacggtggccaacattttc aatgaaattcaattcaaagaaaagcaaagtgcaaattttgaaacagagttcaagcgaatc aaaaacaaacatgcagataatttatcgagaatttttcctaacaaaactattgagcgcgac ttcaaacgtgaagtccaacgtcgattcgatcaacttgcggcttccgtgaaagaaatgtcg aataaattgaatgataaacagcggattttgcttcaagccaaaacaaagcaccaacacttg cgtaattcattgaaggacaaagaagacgaacttaaacgtcttgacgagtcgatttacaat caatgtcaatctgaagaatatgtggaagtaaaaactagagttaaggaaaaggttgaaaaa ttacgagcagaattgggagcaaatcgtgcttcggaaacgctctttaagaagtacatagca gatttaagtgaccgttcttgttgtcctttatgtcacaacgacatgacgggatcgggcaaa gatgatctgatcgaagagttgactacaaaggtacaaagtttacctgaaaaggtactacaa cagcaacaaaacttgatgagcgaagaacgcaaattggaagatcttttaaaattagggccg atcttggagcgtgctaagaaattgcgcgaagacactatcaacttgaaagatgaaattcgt aaacttgatgatacaatgaaggaaatgcagtgtgaaatagatgacatagaaatgtgtctt gcttccccagaagaagaaaaatcgattgccaatattatgttggcggacatgaattcactc gatcgctacaaatcagaaatcgaaagacaccaaaatgacattcaatctctcagggagaca ttgccatcgaatcaagcaaacgaaaatctcgaagaaataaaaactagaaagaagaatctt caagacgaattgcgggagctacgtgctaaacttgatgtgtcacaaagaaatctagatatg ggaaaacaaatgcaagaagaaatgcagcggaaacgtaatacacttttgcaacttaagttt gaattacaagaaagcgcgcaatcagtgccacaattaagacaaagagttgaacagctaaaa tcgcaaattgaaaatgctcgacaagaattaatacaattgaatcatgagttggacatagcg aaaaatgatttggaattattagaaactgaaaaacagaaagaaaaggcaaagaataaaagt atttttgacgaagcctccatcgaaaagcaacaaattgatcagctctttagagatatttgt cgctgtaacgatgaaatatcccaatttgaaactatgggtcttaaagaaaagttggaagaa ttaaaacaagctttaactcaacgtttggatgaaaaaactaaattgcagaacgagctcaaa acattagaagaaaagtccaagtctctgaatgatactatcgcaaaacaagaagttttggaa cgcgatcttaaagaaaatctggatctgaaacaagctgaacgcgaacacgaagaattgcaa agacaacttaaagaattagagttggatttgggagatcttgatttttcaaaactgcgtcgc gaaaaagaccgtcttcaaaaagaagacgacgaaatggtagcgaaacgtagtgtcatttac ggcgccttaagtaaggagcaagaacaagcgaaagaatatcaagcagaattgaataagtca gattttaaagattcttttcggaagtatatcaatacatatcacgaactgcgactcattgaa ctactaatctcggatatcaaaaagtatcgatccgctcttgatgtggctttgacgaaatat catcaggagaaaatgtgtcaaattaatcaaagcattcgagggttgtggcaggaaatttac cgcggaaacgacatagactacatcgagattcgaaccgaagctccggaaagtagcagcagt cgacgtaactttcaatatcgtgttgttcaagttaagaataatacagaactcgatatgcgc ggacgttgtagtgctggacaaaaggttctcgcttccctgattattcgcatggctttgagt gagacattttcgacaaactgtgctgtcatggctctcgatgaacccacaactaatctggat caagccaatatcgcgtcgttgtgcgatgccattggaagaattatacaagatcagcaaaat ttcggacactttagttggatcattattacgcatgacgaaaccttcttgcagattttggca ccgtatttggaagcttcctaccgagtaagtcggaatttcgaaggaaaaagtgtgattaca aaaattgattaa

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