Culicoides brevitarsis: 134828010
Help
Entry
134828010 CDS
T10947
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
cbri Culicoides brevitarsis
Brite
KEGG Orthology (KO) [BR:
cbri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cbri03021
]
134828010
Transcription machinery [BR:
cbri03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
134828010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_19
TPR_1
TPR_14
TPR_12
TPR_8
TPR_16
TPR_CcmH_CycH
TPR_17
TPR_10
TPR_6
TPR_7
ARM_TT21_5th
TPR_9
ARM_TT21_4th
TPR_Slam
ANAPC3
PknG_TPR
DUF4810
TPR_BSK1_C
Motif
Other DBs
NCBI-GeneID:
134828010
NCBI-ProteinID:
XP_063697011
LinkDB
All DBs
Position
1:complement(44533196..44538058)
Genome browser
AA seq
1140 aa
AA seq
DB search
MSNAIEIPLRDTDEVIELDPEQLPEGDEVLGILRQERSFLSTWVNVALAYYKQGKTADFV
KILDASRIDANTEYRDYEKDQMRAFDMLAAYYVQEANREKSKDKKRELFMKATHLYTTAD
KIIMYDQNHLLGRAYFCLLEGDKMEQADAQFNFVLNQSNNNIPSLLGKACIAFNKKDYRG
ALAFYKKALRTHPKCPAAVRLGMGHCFLKMNNPEKARLAFQRALDLDPQCVGALVGLAIL
KLNLHEPESNKIGVQMLSKAYTIDSTNPMVLNHLANHFFFKKDYQKVQHLALHAFHNTEN
EAMRAESCYQLARAFHAQRDYDQAFQYYYQSTQFAPTNFVLPHYGLGQMYIYRGDSENAA
QCFEKVLKVQPGNYETMKILGSLYANSSSQSKRDIARNHLKKVTEQLPDDVEAWIELAQI
LEQNDLQGSLQAYGTAMTLLKDVGMEVPPEILNNVAALHYRLGNLEEAQKNLQQSLERAK
AEVEVDPHYYESISVTMTYNLARLNEAMCCFDKADKLYKDILKEHPNYIDCYLRLGCMAR
DKGLIFVASDFFKDALKINMDNPDTRSLLGNLHLAKMQWTLGQKNFETILKNPTTSQDAY
SLIALGNFWLQSLHQPSKDKEKDKKHQEKALSIFKQVLRNDPKNIWAANGIGCVLAHKGC
IIEARDIFAQVREATADFSDVWLNIAHVYVEQKQYISAIQMYENCLKKFFKHNNVEIMLY
LARAYFRAGKLKEAKFTLIKARRVAPQDTILLFNIALVLQRLAMQTLKDDKSVLTVVLQA
VHELGLSLKYFTYLAQNGDKTRLNVNLAQAEANQCQDLLSQAQYHVARARRIDEQEKSLR
QKQEEERREFKKRQEEERRRMEELRHKTKEEMLAKRQEYIEKTKNAILLATVVDEKPQKG
RKRRDEYVSSSGSEGPPGEGGERKEKKKREPKPKKDKGARKRREKKQQDGSGSDSEGGEG
GAGKKKRGKKRGRVEADKGLTKQQQSRIVSKATISTSESDSDQSRLKIASGSDSGSGSGG
DQKIKKKRRIASGSERSSRSRSRSASGSAKSRSGSSRSRSRSGSRSKSRSKSGSRSRSGS
RSKSRSRSKSGSRSRSGSRSSRSRSGSRSGSGSRRSGSRSGSESRQGSPVSRKSVSASPN
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaacgccatagaaatccctttacgggataccgacgaggtcatcgaattggatccc
gaacaactcccggaaggcgatgaagtgctcggcatcttgcgacaagaacgttcgttcctc
agtacttgggtcaatgttgccttggcttattacaaacaaggcaaaaccgcggattttgtg
aaaattttggatgcatctcgtatcgacgccaataccgaatatcgtgattatgaaaaggat
caaatgcgagcgttcgatatgttagcggcatattacgtacaggaagcgaatcgtgaaaaa
tcgaaggataaaaagcgagaacttttcatgaaagccacgcatttgtacacgacagccgat
aaaattatcatgtacgaccaaaatcacttgttaggacgagcgtatttttgtttgctcgaa
ggcgacaaaatggaacaagctgatgcgcaatttaatttcgtcttgaatcaatcgaacaat
aatattccatcacttttgggcaaagcgtgcattgctttcaacaaaaaagattaccgcggc
gctttggcattttacaaaaaagctctccgaacacatccgaaatgcccggcagcggttcga
ttaggcatgggacactgtttcctgaagatgaacaatccggaaaaagctagattagcattt
caacgtgctttggacctcgatccgcaatgtgtgggcgctctcgttggcttggcaatcctc
aaattgaacttgcacgaacccgaatccaacaaaattggcgttcaaatgctctcgaaggct
tatacgatcgattcgacaaaccccatggtactgaatcatctcgcaaatcactttttcttc
aaaaaggactatcaaaaagtccaacatttggcgttgcatgcattccataacacggaaaat
gaggcaatgagagccgaaagttgctatcaactcgcccgggcttttcatgcgcaacgagat
tacgatcaagcgtttcaatattattatcaatcgacgcagtttgcaccgacaaatttcgtt
ttgccgcattatgggttgggtcagatgtacatttatcgcggcgactcggaaaatgcagcg
caatgctttgaaaaagtattgaaagttcaacccgggaattatgagacgatgaaaattttg
ggttcgctttacgctaattcaagttctcagtcgaaacgggacattgcgagaaatcatttg
aaaaaagtcacggaacaacttccggatgacgttgaagcttggatcgaattggcgcagatt
ttggaacaaaatgaccttcaagggtccttgcaagcttacgggacagcgatgactttgttg
aaagacgttggcatggaagttcctcctgaaatccttaacaacgtcgctgcccttcattat
cgtttgggaaatctcgaagaagcccaaaaaaatcttcaacaaagtttggaacgagcaaaa
gccgaagttgaagttgatccgcattattacgagtcaatttccgtaacgatgacatacaat
ttggcacgactcaacgaagccatgtgttgtttcgataaagccgataaattgtacaaagat
attttgaaagagcatcccaactacatcgattgctatttgcgacttggatgcatggcacga
gataaaggtttgatttttgttgcttcggatttcttcaaagatgcactgaagattaacatg
gataacccggatacgcgatcgttgttgggtaatttgcatttggcgaagatgcaatggact
ttgggacagaagaatttcgaaacgattttgaagaatccaacaacgtcacaagatgcttat
tcgttaattgctttggggaatttttggttgcaaagtttgcatcagccgagtaaagataag
gagaaggataagaagcatcaggagaaggcattgtcgatttttaagcaagtgctgaggaat
gatccgaaaaatatttgggcagcgaatgggattggatgtgtacttgctcataagggatgc
attattgaagcgagagatatttttgctcaggttcgtgaagcaactgccgacttttccgac
gtttggttaaacatcgctcacgtttacgtcgaacaaaagcaatacatcagcgccattcaa
atgtacgaaaattgcttaaaaaaattcttcaagcacaacaacgtcgaaattatgctttat
ctcgctcgagcgtatttccgtgccggcaaattgaaggaagccaagttcactttgatcaaa
gctcgtcgcgttgcgcctcaagacacgattcttctcttcaacatcgctctcgtcttacaa
cgtctcgccatgcaaaccttgaaagatgacaaatccgtcttgactgtcgtcttgcaagct
gttcacgagctcggattgtccttgaaatatttcacgtatctcgcgcaaaatggcgacaaa
acgcgattaaacgtcaatttggcacaagctgaggcaaatcaatgtcaagatttgttgtcg
caagcacaatatcacgtggctcgagctcgtcgcattgacgaacaggaaaaatctctgcgg
caaaagcaggaggaagaacgtcgcgagttcaagaaacgtcaagaagaggaaagacgtcgc
atggaggagttgcgtcacaagacaaaagaagaaatgctcgcgaaacgtcaagagtacatc
gaaaaaacgaaaaatgcgattttacttgcaacggtcgtcgacgaaaaaccccaaaaggga
cgtaagcgacgcgatgaatacgtctcgagcagcggcagtgaaggtcccccaggtgaagga
ggcgaacgaaaagagaagaaaaaacgcgaaccgaaacccaaaaaggacaaaggtgctcga
aaacgtcgcgaaaagaagcaacaagatggctccggatcggattcggaaggcggcgaaggc
ggagctggcaagaaaaagcgcggcaagaaacgcgggcgagtcgaagctgacaaaggactc
acgaaacagcaacaatcccgaattgtctcgaaagcaacaatttccacgagcgagtcggat
agcgatcaaagccgtctcaaaattgcatcgggaagcgattcaggcagcggatccggaggc
gatcaaaaaatcaagaagaaacgtcgtatcgcaagcggatcagaacgttcgtcgcgaagt
cgttcacgttccgcatccggatcggcaaaaagtcgcagcggatcgtcgagatcgcgttca
agatcaggttcgcgaagcaaatcgcgcagtaaatcgggatcgagatcgcgaagtggctca
agatcgaaatcgcgttcacgcagcaagtcgggaagtcgttcacgaagcggaagtagatcg
tcgagatcgcgcagcggaagcagatcgggaagcggaagtcgaagatcgggatctcgaagc
ggaagtgaaagtagacaaggatctccagtttcgaggaaatccgtttcagcaagtcctaat
taa
DBGET
integrated database retrieval system
